EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015021538 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-217k17.7
Alias: -
Full Name: si:ch211-217k17.7
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 3344 bases
Position: chr1:15122577-15125920
Accession: ZDB-GENE-061009-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015020407	Cgr1	PF03879.14	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015029614	-	2368	-	ENSORLP00015020407	271 (aa)	-	-

Gene Model

Click here to download ENSORLG00015021538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015021538's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015021538	si:ch211-217k17.7	65	71.892	ENSAPOG00000010968	si:ch211-217k17.7	99	60.943	Acanthochromis_polyacanthus
ENSORLG00015021538	si:ch211-217k17.7	96	56.383	ENSACIG00000020679	si:ch211-217k17.7	81	55.755	Amphilophus_citrinellus
ENSORLG00015021538	si:ch211-217k17.7	100	61.149	ENSAOCG00000006303	si:ch211-217k17.7	99	60.473	Amphiprion_ocellaris
ENSORLG00015021538	si:ch211-217k17.7	100	61.149	ENSAPEG00000015364	si:ch211-217k17.7	99	60.473	Amphiprion_percula
ENSORLG00015021538	si:ch211-217k17.7	96	60.595	ENSATEG00000016386	si:ch211-217k17.7	92	61.710	Anabas_testudineus
ENSORLG00015021538	si:ch211-217k17.7	62	65.269	ENSAMXG00000037666	si:ch211-217k17.7	52	84.071	Astyanax_mexicanus
ENSORLG00015021538	si:ch211-217k17.7	96	56.667	ENSCSEG00000002637	si:ch211-217k17.7	92	57.037	Cynoglossus_semilaevis
ENSORLG00015021538	si:ch211-217k17.7	96	58.781	ENSCVAG00000003135	si:ch211-217k17.7	92	58.781	Cyprinodon_variegatus
ENSORLG00015021538	si:ch211-217k17.7	85	54.065	ENSDARG00000059908	si:ch211-217k17.7	83	55.691	Danio_rerio
ENSORLG00015021538	si:ch211-217k17.7	85	55.056	ENSELUG00000022687	si:ch211-217k17.7	82	53.933	Esox_lucius
ENSORLG00015021538	si:ch211-217k17.7	85	54.065	ENSGMOG00000016242	-	82	52.282	Gadus_morhua
ENSORLG00015021538	si:ch211-217k17.7	96	58.993	ENSGAFG00000005681	si:ch211-217k17.7	92	58.633	Gambusia_affinis
ENSORLG00015021538	si:ch211-217k17.7	85	60.494	ENSGACG00000017630	si:ch211-217k17.7	98	61.317	Gasterosteus_aculeatus
ENSORLG00015021538	si:ch211-217k17.7	96	58.246	ENSHBUG00000010352	si:ch211-217k17.7	92	59.441	Haplochromis_burtoni
ENSORLG00015021538	si:ch211-217k17.7	100	60.000	ENSKMAG00000000919	si:ch211-217k17.7	98	61.824	Kryptolebias_marmoratus
ENSORLG00015021538	si:ch211-217k17.7	90	59.036	ENSLBEG00000020547	-	82	59.839	Labrus_bergylta
ENSORLG00015021538	si:ch211-217k17.7	99	58.703	ENSMAMG00000016395	si:ch211-217k17.7	96	57.679	Mastacembelus_armatus
ENSORLG00015021538	si:ch211-217k17.7	96	58.596	ENSMZEG00005019822	si:ch211-217k17.7	92	58.276	Maylandia_zebra
ENSORLG00015021538	si:ch211-217k17.7	73	50.754	ENSMOCG00000009306	Ccdc86	53	47.739	Microtus_ochrogaster
ENSORLG00015021538	si:ch211-217k17.7	96	62.362	ENSMMOG00000006446	si:ch211-217k17.7	91	61.993	Mola_mola
ENSORLG00015021538	si:ch211-217k17.7	96	56.877	ENSNBRG00000013330	-	75	90.000	Neolamprologus_brichardi
ENSORLG00015021538	si:ch211-217k17.7	96	60.949	ENSONIG00000017568	si:ch211-217k17.7	92	59.857	Oreochromis_niloticus
ENSORLG00015021538	si:ch211-217k17.7	100	95.971	ENSORLG00000006331	-	100	95.971	Oryzias_latipes
ENSORLG00015021538	si:ch211-217k17.7	100	95.588	ENSORLG00020021345	si:ch211-217k17.7	100	95.588	Oryzias_latipes_hni
ENSORLG00015021538	si:ch211-217k17.7	88	76.378	ENSOMEG00000007064	si:ch211-217k17.7	91	76.378	Oryzias_melastigma
ENSORLG00015021538	si:ch211-217k17.7	85	50.192	ENSPKIG00000016503	si:ch211-217k17.7	81	49.808	Paramormyrops_kingsleyae
ENSORLG00015021538	si:ch211-217k17.7	76	61.644	ENSPMGG00000023665	si:ch211-217k17.7	88	57.588	Periophthalmus_magnuspinnatus
ENSORLG00015021538	si:ch211-217k17.7	96	55.944	ENSPFOG00000011617	si:ch211-217k17.7	94	57.042	Poecilia_formosa
ENSORLG00015021538	si:ch211-217k17.7	57	73.548	ENSPLAG00000016122	si:ch211-217k17.7	94	57.042	Poecilia_latipinna
ENSORLG00015021538	si:ch211-217k17.7	96	57.394	ENSPMEG00000018535	si:ch211-217k17.7	92	57.042	Poecilia_mexicana
ENSORLG00015021538	si:ch211-217k17.7	96	57.042	ENSPREG00000005478	si:ch211-217k17.7	92	56.690	Poecilia_reticulata
ENSORLG00015021538	si:ch211-217k17.7	76	63.592	ENSSMAG00000007686	si:ch211-217k17.7	83	61.753	Scophthalmus_maximus
ENSORLG00015021538	si:ch211-217k17.7	93	61.069	ENSSDUG00000002689	si:ch211-217k17.7	95	61.450	Seriola_dumerili
ENSORLG00015021538	si:ch211-217k17.7	96	61.511	ENSSLDG00000016681	si:ch211-217k17.7	91	62.637	Seriola_lalandi_dorsalis
ENSORLG00015021538	si:ch211-217k17.7	100	58.108	ENSSPAG00000000367	si:ch211-217k17.7	98	61.356	Stegastes_partitus
ENSORLG00015021538	si:ch211-217k17.7	79	59.259	ENSTRUG00000024101	si:ch211-217k17.7	89	56.680	Takifugu_rubripes
ENSORLG00015021538	si:ch211-217k17.7	96	57.040	ENSXCOG00000011207	si:ch211-217k17.7	92	55.957	Xiphophorus_couchianus
ENSORLG00015021538	si:ch211-217k17.7	96	57.401	ENSXMAG00000005529	si:ch211-217k17.7	99	53.150	Xiphophorus_maculatus