EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015021873 (Gene tree)
Gene ID: -
Gene Symbol: aptx
Alias: -
Full Name: aprataxin
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 2511 bases
Position: chr1:15047392-15049902
Accession: ZDB-GENE-040628-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015020642	DcpS_C	PF11969.8	9.5e-35	1	1
ENSORLP00015035289	DcpS_C	PF11969.8	9.8e-35	1	1
ENSORLP00015020645	DcpS_C	PF11969.8	1.8e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015029881	-	963	-	ENSORLP00015035289	320 (aa)	-	-
ENSORLT00015029895	-	951	-	ENSORLP00015020642	316 (aa)	-	-
ENSORLT00015036095	-	1014	-	ENSORLP00015020645	337 (aa)	-	-

Gene Model

Click here to download ENSORLG00015021873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015021873's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015021873	aptx	100	58.544	ENSG00000137074	APTX	92	69.714	Homo_sapiens
ENSORLG00015021873	aptx	100	76.946	ENSAPOG00000008785	aptx	100	76.946	Acanthochromis_polyacanthus
ENSORLG00015021873	aptx	100	57.895	ENSAMEG00000007648	APTX	96	57.895	Ailuropoda_melanoleuca
ENSORLG00015021873	aptx	100	76.562	ENSACIG00000002035	aptx	100	76.562	Amphilophus_citrinellus
ENSORLG00015021873	aptx	100	77.151	ENSAOCG00000000634	aptx	100	77.151	Amphiprion_ocellaris
ENSORLG00015021873	aptx	100	77.151	ENSAPEG00000017253	aptx	100	77.151	Amphiprion_percula
ENSORLG00015021873	aptx	100	77.448	ENSATEG00000017383	aptx	100	77.448	Anabas_testudineus
ENSORLG00015021873	aptx	90	55.763	ENSAPLG00000015645	APTX	100	55.763	Anas_platyrhynchos
ENSORLG00015021873	aptx	100	55.102	ENSACAG00000003581	APTX	95	55.394	Anolis_carolinensis
ENSORLG00015021873	aptx	100	57.895	ENSANAG00000030160	APTX	98	57.669	Aotus_nancymaae
ENSORLG00015021873	aptx	99	77.108	ENSACLG00000018887	aptx	100	77.108	Astatotilapia_calliptera
ENSORLG00015021873	aptx	99	66.272	ENSAMXG00000039899	aptx	99	66.272	Astyanax_mexicanus
ENSORLG00015021873	aptx	100	57.895	ENSBTAG00000013947	APTX	98	57.895	Bos_taurus
ENSORLG00015021873	aptx	100	58.480	ENSCJAG00000007940	APTX	99	58.480	Callithrix_jacchus
ENSORLG00015021873	aptx	100	57.602	ENSCAFG00000001812	APTX	99	57.602	Canis_familiaris
ENSORLG00015021873	aptx	100	57.602	ENSCAFG00020015598	APTX	99	57.602	Canis_lupus_dingo
ENSORLG00015021873	aptx	100	57.895	ENSCHIG00000012896	APTX	99	57.895	Capra_hircus
ENSORLG00015021873	aptx	100	57.143	ENSTSYG00000003041	APTX	99	57.143	Carlito_syrichta
ENSORLG00015021873	aptx	69	65.537	ENSCAPG00000013470	APTX	100	65.537	Cavia_aperea
ENSORLG00015021873	aptx	95	63.084	ENSCPOG00000005975	APTX	100	70.950	Cavia_porcellus
ENSORLG00015021873	aptx	100	57.602	ENSCCAG00000036783	APTX	99	57.602	Cebus_capucinus
ENSORLG00015021873	aptx	100	57.895	ENSCATG00000042639	APTX	96	57.895	Cercocebus_atys
ENSORLG00015021873	aptx	100	59.172	ENSCLAG00000012185	APTX	100	71.508	Chinchilla_lanigera
ENSORLG00015021873	aptx	100	57.602	ENSCSAG00000009885	APTX	96	57.602	Chlorocebus_sabaeus
ENSORLG00015021873	aptx	100	58.357	ENSCPBG00000023973	APTX	98	58.357	Chrysemys_picta_bellii
ENSORLG00015021873	aptx	97	39.560	ENSCING00000008741	-	94	39.560	Ciona_intestinalis
ENSORLG00015021873	aptx	98	38.162	ENSCSAVG00000008038	-	97	37.883	Ciona_savignyi
ENSORLG00015021873	aptx	100	57.143	ENSCANG00000037253	APTX	99	57.143	Colobus_angolensis_palliatus
ENSORLG00015021873	aptx	85	71.591	ENSCGRG00001000705	Aptx	98	71.591	Cricetulus_griseus_chok1gshd
ENSORLG00015021873	aptx	85	71.591	ENSCGRG00000014159	Aptx	98	71.591	Cricetulus_griseus_crigri
ENSORLG00015021873	aptx	99	71.343	ENSCSEG00000009549	aptx	99	71.343	Cynoglossus_semilaevis
ENSORLG00015021873	aptx	100	75.749	ENSCVAG00000011942	aptx	99	75.749	Cyprinodon_variegatus
ENSORLG00015021873	aptx	99	65.325	ENSDARG00000027143	aptx	99	65.635	Danio_rerio
ENSORLG00015021873	aptx	100	58.480	ENSDNOG00000018498	APTX	96	58.480	Dasypus_novemcinctus
ENSORLG00015021873	aptx	100	60.182	ENSDORG00000002139	Aptx	100	70.950	Dipodomys_ordii
ENSORLG00015021873	aptx	55	42.593	FBgn0038704	CG5316	87	43.902	Drosophila_melanogaster
ENSORLG00015021873	aptx	80	56.475	ENSETEG00000012459	APTX	78	57.194	Echinops_telfairi
ENSORLG00015021873	aptx	98	47.839	ENSEBUG00000013914	aptx	95	47.550	Eptatretus_burgeri
ENSORLG00015021873	aptx	99	56.342	ENSEASG00005004566	APTX	99	56.342	Equus_asinus_asinus
ENSORLG00015021873	aptx	99	56.932	ENSECAG00000012674	APTX	91	56.932	Equus_caballus
ENSORLG00015021873	aptx	84	58.020	ENSEEUG00000010693	APTX	95	58.020	Erinaceus_europaeus
ENSORLG00015021873	aptx	100	58.772	ENSFCAG00000008728	APTX	99	58.772	Felis_catus
ENSORLG00015021873	aptx	100	57.101	ENSFALG00000001230	APTX	100	57.101	Ficedula_albicollis
ENSORLG00015021873	aptx	100	59.394	ENSFDAG00000013752	APTX	100	70.286	Fukomys_damarensis
ENSORLG00015021873	aptx	82	71.280	ENSFHEG00000021328	aptx	73	71.280	Fundulus_heteroclitus
ENSORLG00015021873	aptx	99	69.578	ENSGMOG00000012505	aptx	99	69.578	Gadus_morhua
ENSORLG00015021873	aptx	100	55.840	ENSGALG00000001954	APTX	100	56.125	Gallus_gallus
ENSORLG00015021873	aptx	100	74.551	ENSGAFG00000005086	aptx	100	74.551	Gambusia_affinis
ENSORLG00015021873	aptx	99	73.795	ENSGACG00000017887	aptx	99	73.795	Gasterosteus_aculeatus
ENSORLG00015021873	aptx	100	58.074	ENSGAGG00000013230	APTX	100	58.074	Gopherus_agassizii
ENSORLG00015021873	aptx	84	58.763	ENSGGOG00000014232	APTX	95	58.672	Gorilla_gorilla
ENSORLG00015021873	aptx	99	77.108	ENSHBUG00000021058	aptx	100	77.108	Haplochromis_burtoni
ENSORLG00015021873	aptx	100	59.159	ENSHGLG00000015093	APTX	100	70.950	Heterocephalus_glaber_female
ENSORLG00015021873	aptx	100	59.159	ENSHGLG00100013482	APTX	100	70.950	Heterocephalus_glaber_male
ENSORLG00015021873	aptx	99	71.340	ENSHCOG00000018216	aptx	96	71.340	Hippocampus_comes
ENSORLG00015021873	aptx	99	62.832	ENSIPUG00000017548	aptx	99	62.832	Ictalurus_punctatus
ENSORLG00015021873	aptx	100	58.580	ENSSTOG00000005185	APTX	100	71.508	Ictidomys_tridecemlineatus
ENSORLG00015021873	aptx	100	56.325	ENSJJAG00000015653	Aptx	100	56.325	Jaculus_jaculus
ENSORLG00015021873	aptx	100	73.591	ENSKMAG00000000117	aptx	100	73.591	Kryptolebias_marmoratus
ENSORLG00015021873	aptx	99	73.354	ENSLBEG00000015353	aptx	99	73.354	Labrus_bergylta
ENSORLG00015021873	aptx	99	67.085	ENSLBEG00000021489	APTX	99	67.085	Labrus_bergylta
ENSORLG00015021873	aptx	100	57.303	ENSLACG00000003376	APTX	100	57.303	Latimeria_chalumnae
ENSORLG00015021873	aptx	100	62.464	ENSLOCG00000011556	aptx	96	62.464	Lepisosteus_oculatus
ENSORLG00015021873	aptx	100	58.309	ENSLAFG00000005665	APTX	99	58.309	Loxodonta_africana
ENSORLG00015021873	aptx	99	58.112	ENSMFAG00000043141	APTX	96	58.112	Macaca_fascicularis
ENSORLG00015021873	aptx	100	57.602	ENSMMUG00000007724	APTX	96	57.602	Macaca_mulatta
ENSORLG00015021873	aptx	100	57.310	ENSMNEG00000042341	APTX	99	57.310	Macaca_nemestrina
ENSORLG00015021873	aptx	100	57.895	ENSMLEG00000035137	APTX	99	57.895	Mandrillus_leucophaeus
ENSORLG00015021873	aptx	100	74.551	ENSMAMG00000018377	aptx	100	74.551	Mastacembelus_armatus
ENSORLG00015021873	aptx	99	76.807	ENSMZEG00005022621	aptx	100	76.807	Maylandia_zebra
ENSORLG00015021873	aptx	57	69.274	ENSMGAG00000005736	APTX	98	69.274	Meleagris_gallopavo
ENSORLG00015021873	aptx	85	73.295	ENSMAUG00000006039	Aptx	98	73.295	Mesocricetus_auratus
ENSORLG00015021873	aptx	100	57.602	ENSMICG00000006603	APTX	97	57.602	Microcebus_murinus
ENSORLG00015021873	aptx	90	67.010	ENSMOCG00000000869	Aptx	99	71.591	Microtus_ochrogaster
ENSORLG00015021873	aptx	99	74.251	ENSMMOG00000007028	aptx	99	74.251	Mola_mola
ENSORLG00015021873	aptx	99	55.172	ENSMODG00000003365	APTX	99	55.172	Monodelphis_domestica
ENSORLG00015021873	aptx	100	66.272	ENSMALG00000003828	aptx	100	66.272	Monopterus_albus
ENSORLG00015021873	aptx	90	67.526	MGP_CAROLIEiJ_G0025897	-	99	71.591	Mus_caroli
ENSORLG00015021873	aptx	99	58.559	ENSMUSG00000028411	Aptx	99	71.591	Mus_musculus
ENSORLG00015021873	aptx	99	58.258	MGP_PahariEiJ_G0024020	Aptx	99	58.258	Mus_pahari
ENSORLG00015021873	aptx	99	58.559	MGP_SPRETEiJ_G0026846	Aptx	96	58.559	Mus_spretus
ENSORLG00015021873	aptx	100	58.187	ENSMPUG00000004290	APTX	99	58.187	Mustela_putorius_furo
ENSORLG00015021873	aptx	100	57.895	ENSMLUG00000016081	APTX	95	57.895	Myotis_lucifugus
ENSORLG00015021873	aptx	100	59.939	ENSNGAG00000016314	Aptx	100	69.832	Nannospalax_galili
ENSORLG00015021873	aptx	99	76.205	ENSNBRG00000014199	aptx	100	76.205	Neolamprologus_brichardi
ENSORLG00015021873	aptx	100	58.480	ENSNLEG00000032184	APTX	99	58.480	Nomascus_leucogenys
ENSORLG00015021873	aptx	98	54.896	ENSMEUG00000004153	APTX	98	54.896	Notamacropus_eugenii
ENSORLG00015021873	aptx	84	56.463	ENSOPRG00000012403	APTX	95	56.463	Ochotona_princeps
ENSORLG00015021873	aptx	100	53.481	ENSODEG00000000097	-	84	69.143	Octodon_degus
ENSORLG00015021873	aptx	100	57.057	ENSODEG00000015832	-	100	69.832	Octodon_degus
ENSORLG00015021873	aptx	100	76.048	ENSONIG00000014541	aptx	83	76.048	Oreochromis_niloticus
ENSORLG00015021873	aptx	86	56.913	ENSOANG00000009878	APTX	100	56.913	Ornithorhynchus_anatinus
ENSORLG00015021873	aptx	99	58.651	ENSOCUG00000000738	-	98	58.419	Oryctolagus_cuniculus
ENSORLG00015021873	aptx	93	65.842	ENSOCUG00000025059	-	91	72.727	Oryctolagus_cuniculus
ENSORLG00015021873	aptx	100	94.955	ENSORLG00000006237	aptx	100	94.955	Oryzias_latipes
ENSORLG00015021873	aptx	100	94.362	ENSORLG00020021478	aptx	100	94.362	Oryzias_latipes_hni
ENSORLG00015021873	aptx	87	84.694	ENSOMEG00000007875	aptx	81	84.694	Oryzias_melastigma
ENSORLG00015021873	aptx	100	56.433	ENSOGAG00000005388	APTX	96	56.433	Otolemur_garnettii
ENSORLG00015021873	aptx	100	57.143	ENSOARG00000009598	APTX	96	57.143	Ovis_aries
ENSORLG00015021873	aptx	100	58.075	ENSPPAG00000030295	APTX	96	58.075	Pan_paniscus
ENSORLG00015021873	aptx	100	58.772	ENSPPRG00000017524	APTX	99	58.772	Panthera_pardus
ENSORLG00015021873	aptx	100	58.772	ENSPTIG00000020000	APTX	99	58.772	Panthera_tigris_altaica
ENSORLG00015021873	aptx	100	58.075	ENSPTRG00000020850	APTX	99	57.895	Pan_troglodytes
ENSORLG00015021873	aptx	100	57.602	ENSPANG00000025301	APTX	96	57.602	Papio_anubis
ENSORLG00015021873	aptx	100	65.527	ENSPKIG00000013601	aptx	100	65.527	Paramormyrops_kingsleyae
ENSORLG00015021873	aptx	100	58.892	ENSPSIG00000010521	APTX	95	58.892	Pelodiscus_sinensis
ENSORLG00015021873	aptx	98	67.449	ENSPMGG00000018649	aptx	99	67.449	Periophthalmus_magnuspinnatus
ENSORLG00015021873	aptx	99	59.581	ENSPEMG00000007747	Aptx	99	73.295	Peromyscus_maniculatus_bairdii
ENSORLG00015021873	aptx	99	48.974	ENSPMAG00000008417	aptx	97	48.974	Petromyzon_marinus
ENSORLG00015021873	aptx	100	58.807	ENSPCIG00000029852	APTX	100	58.807	Phascolarctos_cinereus
ENSORLG00015021873	aptx	100	75.749	ENSPFOG00000005131	-	99	75.749	Poecilia_formosa
ENSORLG00015021873	aptx	100	75.449	ENSPFOG00000004992	aptx	100	75.449	Poecilia_formosa
ENSORLG00015021873	aptx	100	75.749	ENSPLAG00000007906	aptx	100	75.749	Poecilia_latipinna
ENSORLG00015021873	aptx	100	75.749	ENSPLAG00000007960	APTX	100	75.749	Poecilia_latipinna
ENSORLG00015021873	aptx	100	75.749	ENSPMEG00000018504	aptx	100	75.749	Poecilia_mexicana
ENSORLG00015021873	aptx	100	75.449	ENSPMEG00000019789	APTX	100	75.449	Poecilia_mexicana
ENSORLG00015021873	aptx	100	73.125	ENSPREG00000004375	aptx	100	73.125	Poecilia_reticulata
ENSORLG00015021873	aptx	100	58.480	ENSPPYG00000019142	APTX	96	58.480	Pongo_abelii
ENSORLG00015021873	aptx	100	49.123	ENSPCAG00000010014	APTX	99	49.123	Procavia_capensis
ENSORLG00015021873	aptx	100	58.187	ENSPCOG00000016780	APTX	99	58.187	Propithecus_coquereli
ENSORLG00015021873	aptx	100	57.310	ENSPVAG00000011468	APTX	96	57.310	Pteropus_vampyrus
ENSORLG00015021873	aptx	99	77.108	ENSPNYG00000007675	aptx	100	77.108	Pundamilia_nyererei
ENSORLG00015021873	aptx	99	63.450	ENSPNAG00000015984	aptx	99	63.450	Pygocentrus_nattereri
ENSORLG00015021873	aptx	99	59.756	ENSRNOG00000006582	Aptx	99	59.756	Rattus_norvegicus
ENSORLG00015021873	aptx	100	57.602	ENSRBIG00000042913	APTX	99	57.602	Rhinopithecus_bieti
ENSORLG00015021873	aptx	100	57.602	ENSRROG00000035395	APTX	99	57.602	Rhinopithecus_roxellana
ENSORLG00015021873	aptx	100	58.309	ENSSBOG00000025215	APTX	99	58.309	Saimiri_boliviensis_boliviensis
ENSORLG00015021873	aptx	99	58.580	ENSSHAG00000012205	APTX	94	58.580	Sarcophilus_harrisii
ENSORLG00015021873	aptx	100	65.915	ENSSFOG00015009267	aptx	100	65.915	Scleropages_formosus
ENSORLG00015021873	aptx	100	75.371	ENSSMAG00000008839	aptx	100	75.371	Scophthalmus_maximus
ENSORLG00015021873	aptx	100	77.204	ENSSDUG00000001989	aptx	100	77.204	Seriola_dumerili
ENSORLG00015021873	aptx	100	75.811	ENSSLDG00000004915	aptx	100	75.811	Seriola_lalandi_dorsalis
ENSORLG00015021873	aptx	100	56.941	ENSSPUG00000008994	APTX	86	56.941	Sphenodon_punctatus
ENSORLG00015021873	aptx	100	76.205	ENSSPAG00000020373	aptx	100	76.205	Stegastes_partitus
ENSORLG00015021873	aptx	99	56.891	ENSSSCG00000011001	APTX	99	56.891	Sus_scrofa
ENSORLG00015021873	aptx	100	55.942	ENSTGUG00000001441	APTX	99	55.942	Taeniopygia_guttata
ENSORLG00015021873	aptx	99	71.940	ENSTRUG00000009794	aptx	99	71.940	Takifugu_rubripes
ENSORLG00015021873	aptx	99	71.642	ENSTNIG00000010570	aptx	99	71.642	Tetraodon_nigroviridis
ENSORLG00015021873	aptx	100	53.779	ENSTBEG00000008504	APTX	96	53.779	Tupaia_belangeri
ENSORLG00015021873	aptx	93	52.830	ENSTTRG00000007384	APTX	95	52.830	Tursiops_truncatus
ENSORLG00015021873	aptx	99	57.941	ENSUAMG00000003700	APTX	99	56.966	Ursus_americanus
ENSORLG00015021873	aptx	99	57.941	ENSUMAG00000005837	APTX	99	57.941	Ursus_maritimus
ENSORLG00015021873	aptx	72	62.791	ENSVPAG00000001297	APTX	66	62.791	Vicugna_pacos
ENSORLG00015021873	aptx	100	57.602	ENSVVUG00000021130	APTX	99	57.602	Vulpes_vulpes
ENSORLG00015021873	aptx	99	55.652	ENSXETG00000024143	aptx	99	56.522	Xenopus_tropicalis
ENSORLG00015021873	aptx	100	71.875	ENSXCOG00000005020	aptx	100	71.875	Xiphophorus_couchianus
ENSORLG00015021873	aptx	100	75.449	ENSXMAG00000022086	aptx	97	75.449	Xiphophorus_maculatus