EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015022085 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 55660 bases
Position: chr7:288228-343887
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015035468	RRM_5	PF13893.6	3.6e-08	1	2
ENSORLP00015035468	RRM_5	PF13893.6	3.6e-08	2	2
ENSORLP00015035468	RRM_1	PF00076.22	4.5e-40	1	3
ENSORLP00015035468	RRM_1	PF00076.22	4.5e-40	2	3
ENSORLP00015035468	RRM_1	PF00076.22	4.5e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015030239	-	10389	-	ENSORLP00015035468	3462 (aa)	-	-

Gene Model

Click here to download ENSORLG00015022085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015022085's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015022085	-	67	76.650	ENSG00000065526	SPEN	99	89.189	Homo_sapiens
ENSORLG00015022085	-	98	66.071	ENSAPOG00000011411	si:ch1073-335m2.2	51	82.840	Acanthochromis_polyacanthus
ENSORLG00015022085	-	100	69.941	ENSAPOG00000009853	-	88	91.573	Acanthochromis_polyacanthus
ENSORLG00015022085	-	67	81.667	ENSAMEG00000011817	SPEN	93	81.667	Ailuropoda_melanoleuca
ENSORLG00015022085	-	100	69.856	ENSAOCG00000014505	-	100	69.885	Amphiprion_ocellaris
ENSORLG00015022085	-	94	75.940	ENSAPEG00000013515	si:ch1073-335m2.2	88	75.940	Amphiprion_percula
ENSORLG00015022085	-	100	69.885	ENSAPEG00000010288	-	100	69.941	Amphiprion_percula
ENSORLG00015022085	-	100	68.110	ENSATEG00000005627	-	100	68.221	Anabas_testudineus
ENSORLG00015022085	-	51	75.253	ENSAPLG00000012618	SPEN	99	75.253	Anas_platyrhynchos
ENSORLG00015022085	-	51	83.237	ENSACAG00000013761	SPEN	63	79.235	Anolis_carolinensis
ENSORLG00015022085	-	86	84.756	ENSANAG00000034428	SPEN	63	84.756	Aotus_nancymaae
ENSORLG00015022085	-	100	68.158	ENSACLG00000016922	-	100	68.411	Astatotilapia_calliptera
ENSORLG00015022085	-	100	50.525	ENSAMXG00000012485	spen	100	50.830	Astyanax_mexicanus
ENSORLG00015022085	-	88	47.047	ENSBTAG00000018729	SPEN	68	54.057	Bos_taurus
ENSORLG00015022085	-	86	84.756	ENSCJAG00000008527	SPEN	63	84.756	Callithrix_jacchus
ENSORLG00015022085	-	86	50.370	ENSCAFG00000016132	-	91	50.247	Canis_familiaris
ENSORLG00015022085	-	92	46.941	ENSCHIG00000025070	SPEN	90	54.274	Capra_hircus
ENSORLG00015022085	-	58	77.157	ENSTSYG00000036016	SPEN	61	77.157	Carlito_syrichta
ENSORLG00015022085	-	93	77.665	ENSCAPG00000013803	SPEN	92	77.665	Cavia_aperea
ENSORLG00015022085	-	68	77.665	ENSCPOG00000014036	SPEN	86	77.665	Cavia_porcellus
ENSORLG00015022085	-	93	77.157	ENSCCAG00000020258	SPEN	86	77.157	Cebus_capucinus
ENSORLG00015022085	-	62	85.185	ENSCATG00000015079	SPEN	87	77.157	Cercocebus_atys
ENSORLG00015022085	-	67	77.157	ENSCLAG00000002018	SPEN	67	77.157	Chinchilla_lanigera
ENSORLG00015022085	-	68	77.157	ENSCSAG00000000841	SPEN	65	77.157	Chlorocebus_sabaeus
ENSORLG00015022085	-	93	53.282	ENSCPBG00000010477	SPEN	94	53.483	Chrysemys_picta_bellii
ENSORLG00015022085	-	67	77.157	ENSCANG00000034547	SPEN	69	77.157	Colobus_angolensis_palliatus
ENSORLG00015022085	-	83	77.551	ENSCGRG00001007725	Spen	83	77.551	Cricetulus_griseus_chok1gshd
ENSORLG00015022085	-	61	77.551	ENSCGRG00000010581	Spen	83	77.551	Cricetulus_griseus_crigri
ENSORLG00015022085	-	100	64.446	ENSCSEG00000003915	-	99	65.585	Cynoglossus_semilaevis
ENSORLG00015022085	-	73	64.174	ENSCVAG00000009075	si:ch1073-335m2.2	54	82.840	Cyprinodon_variegatus
ENSORLG00015022085	-	100	67.023	ENSCVAG00000016346	-	100	67.023	Cyprinodon_variegatus
ENSORLG00015022085	-	100	49.504	ENSDARG00000074245	spen	100	91.111	Danio_rerio
ENSORLG00015022085	-	100	40.229	ENSDARG00000074332	si:ch1073-335m2.2	94	48.727	Danio_rerio
ENSORLG00015022085	-	75	77.665	ENSDNOG00000041948	SPEN	89	77.665	Dasypus_novemcinctus
ENSORLG00015022085	-	94	77.665	ENSDORG00000023909	Spen	96	77.665	Dipodomys_ordii
ENSORLG00015022085	-	94	85.185	ENSEASG00005015911	SPEN	93	85.185	Equus_asinus_asinus
ENSORLG00015022085	-	94	85.185	ENSECAG00000008833	SPEN	93	85.185	Equus_caballus
ENSORLG00015022085	-	56	88.372	ENSEEUG00000010255	SPEN	58	88.372	Erinaceus_europaeus
ENSORLG00015022085	-	96	49.302	ENSELUG00000007726	si:ch1073-335m2.2	93	49.534	Esox_lucius
ENSORLG00015022085	-	63	49.717	ENSFALG00000003551	SPEN	100	41.824	Ficedula_albicollis
ENSORLG00015022085	-	85	84.884	ENSFDAG00000010212	SPEN	96	43.242	Fukomys_damarensis
ENSORLG00015022085	-	98	84.783	ENSGMOG00000008397	-	98	86.592	Gadus_morhua
ENSORLG00015022085	-	97	64.018	ENSGMOG00000008156	si:ch1073-335m2.2	73	63.687	Gadus_morhua
ENSORLG00015022085	-	93	54.389	ENSGALG00000036932	SPEN	99	44.506	Gallus_gallus
ENSORLG00015022085	-	100	67.625	ENSGAFG00000015819	-	89	90.449	Gambusia_affinis
ENSORLG00015022085	-	93	73.529	ENSGAFG00000021570	si:ch1073-335m2.2	91	73.529	Gambusia_affinis
ENSORLG00015022085	-	100	64.424	ENSGACG00000005341	-	100	64.593	Gasterosteus_aculeatus
ENSORLG00015022085	-	100	44.621	ENSGAGG00000020785	SPEN	94	54.572	Gopherus_agassizii
ENSORLG00015022085	-	68	76.650	ENSGGOG00000012041	SPEN	65	76.650	Gorilla_gorilla
ENSORLG00015022085	-	100	68.458	ENSHBUG00000020626	-	100	68.542	Haplochromis_burtoni
ENSORLG00015022085	-	88	64.326	ENSHBUG00000023253	si:ch1073-335m2.2	89	64.214	Haplochromis_burtoni
ENSORLG00015022085	-	91	77.157	ENSHGLG00000019259	SPEN	84	77.157	Heterocephalus_glaber_female
ENSORLG00015022085	-	65	77.157	ENSHGLG00100019294	SPEN	66	77.157	Heterocephalus_glaber_male
ENSORLG00015022085	-	100	48.833	ENSIPUG00000021668	spen	100	49.063	Ictalurus_punctatus
ENSORLG00015022085	-	96	40.539	ENSIPUG00000018212	si:ch1073-335m2.2	99	43.188	Ictalurus_punctatus
ENSORLG00015022085	-	88	77.157	ENSSTOG00000021428	SPEN	93	77.157	Ictidomys_tridecemlineatus
ENSORLG00015022085	-	80	77.157	ENSJJAG00000010882	Spen	96	77.157	Jaculus_jaculus
ENSORLG00015022085	-	100	67.828	ENSKMAG00000003882	-	100	67.969	Kryptolebias_marmoratus
ENSORLG00015022085	-	91	66.706	ENSKMAG00000021725	si:ch1073-335m2.2	65	45.853	Kryptolebias_marmoratus
ENSORLG00015022085	-	51	83.133	ENSLBEG00000020855	si:ch1073-335m2.2	50	83.133	Labrus_bergylta
ENSORLG00015022085	-	84	62.517	ENSLBEG00000019129	-	100	62.483	Labrus_bergylta
ENSORLG00015022085	-	99	83.721	ENSLACG00000003258	SPEN	97	83.721	Latimeria_chalumnae
ENSORLG00015022085	-	97	84.828	ENSLOCG00000007896	si:ch1073-335m2.2	98	84.828	Lepisosteus_oculatus
ENSORLG00015022085	-	90	77.157	ENSLAFG00000004524	SPEN	85	77.157	Loxodonta_africana
ENSORLG00015022085	-	67	77.157	ENSMFAG00000041974	SPEN	88	77.157	Macaca_fascicularis
ENSORLG00015022085	-	67	77.157	ENSMMUG00000008026	SPEN	88	77.157	Macaca_mulatta
ENSORLG00015022085	-	67	77.157	ENSMNEG00000042402	SPEN	88	77.157	Macaca_nemestrina
ENSORLG00015022085	-	68	77.157	ENSMLEG00000039293	SPEN	69	77.157	Mandrillus_leucophaeus
ENSORLG00015022085	-	89	66.866	ENSMZEG00005021491	-	99	66.992	Maylandia_zebra
ENSORLG00015022085	-	72	77.228	ENSMAUG00000008318	Spen	93	77.228	Mesocricetus_auratus
ENSORLG00015022085	-	88	77.665	ENSMICG00000030994	SPEN	83	77.665	Microcebus_murinus
ENSORLG00015022085	-	89	80.769	ENSMOCG00000016083	Spen	82	80.769	Microtus_ochrogaster
ENSORLG00015022085	-	98	77.049	ENSMODG00000003411	SPEN	96	77.049	Monodelphis_domestica
ENSORLG00015022085	-	100	67.987	ENSMALG00000008625	-	100	67.958	Monopterus_albus
ENSORLG00015022085	-	63	77.665	MGP_CAROLIEiJ_G0026745	Spen	62	77.665	Mus_caroli
ENSORLG00015022085	-	64	77.157	ENSMUSG00000040761	Spen	62	77.157	Mus_musculus
ENSORLG00015022085	-	65	78.173	MGP_PahariEiJ_G0029076	Spen	62	78.173	Mus_pahari
ENSORLG00015022085	-	75	77.157	MGP_SPRETEiJ_G0027724	Spen	62	77.157	Mus_spretus
ENSORLG00015022085	-	94	83.908	ENSMPUG00000016317	SPEN	91	83.908	Mustela_putorius_furo
ENSORLG00015022085	-	94	89.247	ENSMLUG00000010144	SPEN	92	89.247	Myotis_lucifugus
ENSORLG00015022085	-	94	77.665	ENSNGAG00000000641	Spen	97	77.665	Nannospalax_galili
ENSORLG00015022085	-	85	65.461	ENSNBRG00000022090	-	100	65.594	Neolamprologus_brichardi
ENSORLG00015022085	-	67	76.650	ENSNLEG00000007652	SPEN	64	76.650	Nomascus_leucogenys
ENSORLG00015022085	-	77	83.333	ENSMEUG00000002422	SPEN	89	83.333	Notamacropus_eugenii
ENSORLG00015022085	-	63	78.173	ENSOPRG00000015800	SPEN	79	63.743	Ochotona_princeps
ENSORLG00015022085	-	77	76.650	ENSODEG00000016644	SPEN	87	76.650	Octodon_degus
ENSORLG00015022085	-	100	67.426	ENSONIG00000006573	-	99	84.264	Oreochromis_niloticus
ENSORLG00015022085	-	73	77.665	ENSOCUG00000010840	SPEN	88	77.665	Oryctolagus_cuniculus
ENSORLG00015022085	-	87	97.004	ENSORLG00000028894	-	100	97.004	Oryzias_latipes
ENSORLG00015022085	-	87	97.848	ENSORLG00020007735	-	100	97.848	Oryzias_latipes_hni
ENSORLG00015022085	-	100	82.803	ENSOMEG00000007639	-	100	82.889	Oryzias_melastigma
ENSORLG00015022085	-	68	81.319	ENSOGAG00000025110	SPEN	94	78.173	Otolemur_garnettii
ENSORLG00015022085	-	99	43.501	ENSOARG00000008477	SPEN	67	53.462	Ovis_aries
ENSORLG00015022085	-	67	76.650	ENSPPAG00000035690	SPEN	64	76.650	Pan_paniscus
ENSORLG00015022085	-	67	76.650	ENSPTRG00000000210	SPEN	65	76.650	Pan_troglodytes
ENSORLG00015022085	-	68	77.157	ENSPANG00000006293	SPEN	69	77.157	Papio_anubis
ENSORLG00015022085	-	97	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	99	100.000	Paramormyrops_kingsleyae
ENSORLG00015022085	-	100	50.302	ENSPKIG00000002617	SPEN	91	68.051	Paramormyrops_kingsleyae
ENSORLG00015022085	-	50	79.781	ENSPSIG00000008026	SPEN	50	76.263	Pelodiscus_sinensis
ENSORLG00015022085	-	55	77.665	ENSPEMG00000022997	Spen	87	64.216	Peromyscus_maniculatus_bairdii
ENSORLG00015022085	-	65	36.435	ENSPFOG00000017986	si:ch1073-335m2.2	65	36.086	Poecilia_formosa
ENSORLG00015022085	-	72	33.512	ENSPLAG00000016625	si:ch1073-335m2.2	86	47.948	Poecilia_latipinna
ENSORLG00015022085	-	100	67.794	ENSPMEG00000006764	-	100	67.737	Poecilia_mexicana
ENSORLG00015022085	-	87	61.761	ENSPMEG00000002674	si:ch1073-335m2.2	68	65.714	Poecilia_mexicana
ENSORLG00015022085	-	100	67.709	ENSPREG00000010399	-	100	67.746	Poecilia_reticulata
ENSORLG00015022085	-	67	76.650	ENSPPYG00000001834	SPEN	65	76.650	Pongo_abelii
ENSORLG00015022085	-	87	78.173	ENSPCAG00000009543	SPEN	56	78.173	Procavia_capensis
ENSORLG00015022085	-	89	75.253	ENSPCOG00000021735	SPEN	65	75.253	Propithecus_coquereli
ENSORLG00015022085	-	71	76.650	ENSPVAG00000013794	SPEN	65	72.770	Pteropus_vampyrus
ENSORLG00015022085	-	100	68.374	ENSPNYG00000012379	-	100	68.458	Pundamilia_nyererei
ENSORLG00015022085	-	100	43.411	ENSPNAG00000011452	si:ch1073-335m2.2	100	42.826	Pygocentrus_nattereri
ENSORLG00015022085	-	100	52.220	ENSPNAG00000020795	spen	88	67.203	Pygocentrus_nattereri
ENSORLG00015022085	-	56	77.665	ENSRNOG00000033556	Spen	90	77.665	Rattus_norvegicus
ENSORLG00015022085	-	68	77.157	ENSRBIG00000039654	SPEN	69	77.157	Rhinopithecus_bieti
ENSORLG00015022085	-	67	77.157	ENSRROG00000035686	SPEN	69	77.157	Rhinopithecus_roxellana
ENSORLG00015022085	-	83	80.769	ENSSBOG00000028770	SPEN	84	80.769	Saimiri_boliviensis_boliviensis
ENSORLG00015022085	-	95	46.157	ENSSHAG00000004960	SPEN	99	71.553	Sarcophilus_harrisii
ENSORLG00015022085	-	86	66.667	ENSSFOG00015007131	si:ch1073-335m2.2	96	66.667	Scleropages_formosus
ENSORLG00015022085	-	100	68.428	ENSSMAG00000008996	-	100	68.372	Scophthalmus_maximus
ENSORLG00015022085	-	100	41.073	ENSSMAG00000000125	si:ch1073-335m2.2	100	40.476	Scophthalmus_maximus
ENSORLG00015022085	-	66	36.269	ENSSDUG00000008416	si:ch1073-335m2.2	85	82.840	Seriola_dumerili
ENSORLG00015022085	-	100	69.330	ENSSDUG00000003476	-	100	69.443	Seriola_dumerili
ENSORLG00015022085	-	100	69.157	ENSSLDG00000012950	-	100	69.354	Seriola_lalandi_dorsalis
ENSORLG00015022085	-	81	47.321	ENSSPUG00000001866	-	93	47.646	Sphenodon_punctatus
ENSORLG00015022085	-	100	70.701	ENSSPAG00000006014	-	100	70.701	Stegastes_partitus
ENSORLG00015022085	-	53	83.432	ENSSPAG00000012454	si:ch1073-335m2.2	53	83.432	Stegastes_partitus
ENSORLG00015022085	-	86	43.781	ENSSSCG00000034484	SPEN	96	43.645	Sus_scrofa
ENSORLG00015022085	-	100	63.754	ENSTRUG00000024350	-	100	63.922	Takifugu_rubripes
ENSORLG00015022085	-	57	67.562	ENSTRUG00000021008	si:ch1073-335m2.2	73	35.979	Takifugu_rubripes
ENSORLG00015022085	-	96	81.849	ENSTNIG00000010907	-	100	81.398	Tetraodon_nigroviridis
ENSORLG00015022085	-	67	77.703	ENSTBEG00000003628	SPEN	62	77.703	Tupaia_belangeri
ENSORLG00015022085	-	73	77.665	ENSTTRG00000015704	SPEN	68	77.665	Tursiops_truncatus
ENSORLG00015022085	-	66	82.222	ENSUAMG00000009600	SPEN	91	82.222	Ursus_americanus
ENSORLG00015022085	-	66	82.222	ENSUMAG00000021641	SPEN	91	82.222	Ursus_maritimus
ENSORLG00015022085	-	87	100.000	ENSVVUG00000028951	SPEN	90	100.000	Vulpes_vulpes
ENSORLG00015022085	-	73	47.406	ENSXETG00000023114	SPEN	100	40.538	Xenopus_tropicalis
ENSORLG00015022085	-	90	75.385	ENSXCOG00000004516	si:ch1073-335m2.2	95	75.385	Xiphophorus_couchianus
ENSORLG00015022085	-	100	67.513	ENSXMAG00000021384	-	87	90.449	Xiphophorus_maculatus
ENSORLG00015022085	-	97	64.581	ENSXMAG00000029887	si:ch1073-335m2.2	93	63.885	Xiphophorus_maculatus