EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015022089 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 5581 bases
Position: chr7:13962858-13968438
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015020912	APOBEC_N	PF08210.11	8e-44	1	1
ENSORLP00015020912	APOBEC_C	PF05240.14	1.1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015030241	-	2329	-	ENSORLP00015020912	266 (aa)	-	-

Gene Model

Click here to download ENSORLG00015022089's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015022089's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015022089	-	62	30.588	ENSORLG00015012504	aicda	86	30.588
ENSORLG00015022089	-	84	58.515	ENSORLG00015021781	apobec2a	96	58.515

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015022089	-	69	60.209	ENSG00000124701	APOBEC2	85	60.209	Homo_sapiens
ENSORLG00015022089	-	100	79.478	ENSAPOG00000019390	apobec2b	100	80.970	Acanthochromis_polyacanthus
ENSORLG00015022089	-	63	57.471	ENSAMEG00000004467	APOBEC2	69	57.471	Ailuropoda_melanoleuca
ENSORLG00015022089	-	100	79.104	ENSACIG00000002472	APOBEC2	100	74.436	Amphilophus_citrinellus
ENSORLG00015022089	-	71	57.292	ENSACIG00000016370	apobec2a	76	56.410	Amphilophus_citrinellus
ENSORLG00015022089	-	100	79.851	ENSAOCG00000023355	apobec2b	100	81.343	Amphiprion_ocellaris
ENSORLG00015022089	-	100	52.593	ENSAOCG00000003291	apobec2a	100	52.963	Amphiprion_ocellaris
ENSORLG00015022089	-	100	79.478	ENSAPEG00000004591	apobec2b	100	80.597	Amphiprion_percula
ENSORLG00015022089	-	99	52.788	ENSAPEG00000003630	apobec2a	99	52.788	Amphiprion_percula
ENSORLG00015022089	-	100	79.554	ENSATEG00000023043	APOBEC2	100	82.156	Anabas_testudineus
ENSORLG00015022089	-	100	50.746	ENSATEG00000000956	apobec2a	98	61.143	Anabas_testudineus
ENSORLG00015022089	-	85	51.948	ENSAPLG00000002895	APOBEC2	99	51.948	Anas_platyrhynchos
ENSORLG00015022089	-	80	47.945	ENSACAG00000016506	APOBEC2	94	55.114	Anolis_carolinensis
ENSORLG00015022089	-	69	60.209	ENSANAG00000026993	APOBEC2	85	60.209	Aotus_nancymaae
ENSORLG00015022089	-	100	79.104	ENSACLG00000007634	APOBEC2	100	78.731	Astatotilapia_calliptera
ENSORLG00015022089	-	65	60.465	ENSACLG00000026736	-	97	60.465	Astatotilapia_calliptera
ENSORLG00015022089	-	78	56.338	ENSAMXG00000042992	apobec2a	95	55.187	Astyanax_mexicanus
ENSORLG00015022089	-	82	60.889	ENSAMXG00000015966	apobec2b	96	57.621	Astyanax_mexicanus
ENSORLG00015022089	-	69	58.639	ENSBTAG00000005974	APOBEC2	78	50.206	Bos_taurus
ENSORLG00015022089	-	69	60.209	ENSCJAG00000004063	APOBEC2	85	60.209	Callithrix_jacchus
ENSORLG00015022089	-	69	58.639	ENSCAFG00000001575	APOBEC2	85	58.639	Canis_familiaris
ENSORLG00015022089	-	69	58.639	ENSCAFG00020008306	APOBEC2	85	58.639	Canis_lupus_dingo
ENSORLG00015022089	-	69	57.592	ENSCHIG00000026348	APOBEC2	98	53.881	Capra_hircus
ENSORLG00015022089	-	69	59.162	ENSTSYG00000008206	APOBEC2	96	54.338	Carlito_syrichta
ENSORLG00015022089	-	69	58.115	ENSCAPG00000015084	APOBEC2	84	58.115	Cavia_aperea
ENSORLG00015022089	-	69	58.115	ENSCPOG00000036103	APOBEC2	84	58.115	Cavia_porcellus
ENSORLG00015022089	-	69	60.209	ENSCCAG00000033987	APOBEC2	85	60.209	Cebus_capucinus
ENSORLG00015022089	-	69	60.733	ENSCATG00000010691	APOBEC2	85	60.733	Cercocebus_atys
ENSORLG00015022089	-	69	58.639	ENSCLAG00000013817	APOBEC2	84	58.639	Chinchilla_lanigera
ENSORLG00015022089	-	69	60.733	ENSCSAG00000011177	APOBEC2	85	60.733	Chlorocebus_sabaeus
ENSORLG00015022089	-	63	59.770	ENSCHOG00000008930	APOBEC2	97	59.770	Choloepus_hoffmanni
ENSORLG00015022089	-	68	57.297	ENSCPBG00000017469	APOBEC2	96	54.028	Chrysemys_picta_bellii
ENSORLG00015022089	-	69	60.733	ENSCANG00000035072	APOBEC2	85	60.733	Colobus_angolensis_palliatus
ENSORLG00015022089	-	69	58.639	ENSCGRG00001014983	Apobec2	85	58.639	Cricetulus_griseus_chok1gshd
ENSORLG00015022089	-	69	58.639	ENSCGRG00000007835	Apobec2	85	58.639	Cricetulus_griseus_crigri
ENSORLG00015022089	-	71	77.660	ENSCSEG00000000690	-	100	63.603	Cynoglossus_semilaevis
ENSORLG00015022089	-	90	55.556	ENSCSEG00000020201	apobec2a	92	57.872	Cynoglossus_semilaevis
ENSORLG00015022089	-	100	78.571	ENSCVAG00000012342	apobec2b	100	78.571	Cyprinodon_variegatus
ENSORLG00015022089	-	84	61.404	ENSDARG00000113992	apobec2b	95	57.088	Danio_rerio
ENSORLG00015022089	-	98	53.030	ENSDARG00000018881	apobec2a	94	53.091	Danio_rerio
ENSORLG00015022089	-	69	42.051	ENSDNOG00000033914	APOBEC2	98	40.870	Dasypus_novemcinctus
ENSORLG00015022089	-	69	58.115	ENSDORG00000006447	Apobec2	83	58.115	Dipodomys_ordii
ENSORLG00015022089	-	69	58.639	ENSETEG00000000624	APOBEC2	83	58.639	Echinops_telfairi
ENSORLG00015022089	-	58	59.748	ENSEASG00005002937	APOBEC2	83	59.748	Equus_asinus_asinus
ENSORLG00015022089	-	69	59.162	ENSECAG00000006576	APOBEC2	85	59.162	Equus_caballus
ENSORLG00015022089	-	69	58.115	ENSEEUG00000006046	APOBEC2	85	58.639	Erinaceus_europaeus
ENSORLG00015022089	-	70	61.905	ENSELUG00000003736	apobec2a	73	59.903	Esox_lucius
ENSORLG00015022089	-	69	58.115	ENSFCAG00000004108	APOBEC2	98	53.636	Felis_catus
ENSORLG00015022089	-	68	48.404	ENSFALG00000003910	APOBEC2	98	44.690	Ficedula_albicollis
ENSORLG00015022089	-	69	58.115	ENSFDAG00000006015	APOBEC2	85	58.115	Fukomys_damarensis
ENSORLG00015022089	-	80	83.019	ENSFHEG00000005492	apobec2b	100	71.429	Fundulus_heteroclitus
ENSORLG00015022089	-	77	73.430	ENSGMOG00000006819	apobec2b	96	67.797	Gadus_morhua
ENSORLG00015022089	-	65	63.636	ENSGMOG00000007028	apobec2a	100	63.636	Gadus_morhua
ENSORLG00015022089	-	69	56.614	ENSGALG00000003226	APOBEC2	98	51.613	Gallus_gallus
ENSORLG00015022089	-	100	81.955	ENSGAFG00000007634	apobec2b	87	81.955	Gambusia_affinis
ENSORLG00015022089	-	70	62.234	ENSGACG00000011671	apobec2a	100	62.234	Gasterosteus_aculeatus
ENSORLG00015022089	-	100	74.436	ENSGACG00000009663	apobec2b	99	79.565	Gasterosteus_aculeatus
ENSORLG00015022089	-	68	57.297	ENSGAGG00000010347	APOBEC2	84	57.527	Gopherus_agassizii
ENSORLG00015022089	-	69	60.209	ENSGGOG00000001099	APOBEC2	83	60.209	Gorilla_gorilla
ENSORLG00015022089	-	88	55.738	ENSHBUG00000015890	apobec2a	95	56.780	Haplochromis_burtoni
ENSORLG00015022089	-	100	77.612	ENSHBUG00000005993	apobec2b	100	77.612	Haplochromis_burtoni
ENSORLG00015022089	-	69	58.639	ENSHGLG00000017169	APOBEC2	98	52.679	Heterocephalus_glaber_female
ENSORLG00015022089	-	69	58.639	ENSHGLG00100019442	APOBEC2	98	52.679	Heterocephalus_glaber_male
ENSORLG00015022089	-	100	75.373	ENSHCOG00000002712	APOBEC2	100	75.373	Hippocampus_comes
ENSORLG00015022089	-	97	49.231	ENSHCOG00000020319	apobec2a	81	59.596	Hippocampus_comes
ENSORLG00015022089	-	100	57.455	ENSIPUG00000013784	Apobec2	100	57.664	Ictalurus_punctatus
ENSORLG00015022089	-	77	56.621	ENSIPUG00000017355	apobec2a	65	54.585	Ictalurus_punctatus
ENSORLG00015022089	-	69	60.209	ENSSTOG00000023643	APOBEC2	98	55.909	Ictidomys_tridecemlineatus
ENSORLG00015022089	-	69	57.592	ENSJJAG00000009733	Apobec2	85	57.592	Jaculus_jaculus
ENSORLG00015022089	-	99	80.000	ENSKMAG00000020631	apobec2b	99	80.000	Kryptolebias_marmoratus
ENSORLG00015022089	-	84	56.710	ENSLBEG00000025214	apobec2a	96	56.710	Labrus_bergylta
ENSORLG00015022089	-	79	81.517	ENSLBEG00000009422	-	100	70.979	Labrus_bergylta
ENSORLG00015022089	-	84	56.332	ENSLACG00000015985	APOBEC2	96	56.332	Latimeria_chalumnae
ENSORLG00015022089	-	72	61.735	ENSLOCG00000012415	apobec2b	82	58.079	Lepisosteus_oculatus
ENSORLG00015022089	-	69	60.209	ENSLAFG00000016563	APOBEC2	98	55.000	Loxodonta_africana
ENSORLG00015022089	-	69	60.733	ENSMFAG00000044645	APOBEC2	85	60.733	Macaca_fascicularis
ENSORLG00015022089	-	69	60.733	ENSMMUG00000021171	APOBEC2	85	60.733	Macaca_mulatta
ENSORLG00015022089	-	69	60.733	ENSMNEG00000045497	APOBEC2	85	60.733	Macaca_nemestrina
ENSORLG00015022089	-	69	60.733	ENSMLEG00000028328	APOBEC2	85	60.733	Mandrillus_leucophaeus
ENSORLG00015022089	-	100	76.364	ENSMAMG00000007926	APOBEC2	100	77.941	Mastacembelus_armatus
ENSORLG00015022089	-	100	53.333	ENSMAMG00000023685	apobec2a	82	61.137	Mastacembelus_armatus
ENSORLG00015022089	-	100	79.104	ENSMZEG00005027159	APOBEC2	100	79.104	Maylandia_zebra
ENSORLG00015022089	-	83	57.826	ENSMZEG00005005240	-	98	57.826	Maylandia_zebra
ENSORLG00015022089	-	83	51.101	ENSMGAG00000010173	APOBEC2	98	51.101	Meleagris_gallopavo
ENSORLG00015022089	-	69	59.162	ENSMAUG00000011016	Apobec2	85	59.162	Mesocricetus_auratus
ENSORLG00015022089	-	77	54.545	ENSMICG00000043339	APOBEC2	98	54.545	Microcebus_murinus
ENSORLG00015022089	-	69	59.686	ENSMOCG00000001904	Apobec2	98	55.000	Microtus_ochrogaster
ENSORLG00015022089	-	100	76.692	ENSMMOG00000008681	apobec2b	100	76.692	Mola_mola
ENSORLG00015022089	-	69	57.368	ENSMODG00000013090	APOBEC2	86	57.368	Monodelphis_domestica
ENSORLG00015022089	-	89	53.782	ENSMALG00000020523	apobec2a	93	54.113	Monopterus_albus
ENSORLG00015022089	-	100	74.060	ENSMALG00000013779	APOBEC2	100	74.254	Monopterus_albus
ENSORLG00015022089	-	69	58.639	MGP_CAROLIEiJ_G0021727	Apobec2	98	54.091	Mus_caroli
ENSORLG00015022089	-	69	58.639	ENSMUSG00000040694	Apobec2	98	54.091	Mus_musculus
ENSORLG00015022089	-	69	58.639	MGP_PahariEiJ_G0020716	Apobec2	98	54.091	Mus_pahari
ENSORLG00015022089	-	69	59.162	ENSMPUG00000013691	APOBEC2	82	59.162	Mustela_putorius_furo
ENSORLG00015022089	-	69	58.639	ENSMLUG00000011327	APOBEC2	83	58.639	Myotis_lucifugus
ENSORLG00015022089	-	69	58.115	ENSNGAG00000013717	Apobec2	85	58.115	Nannospalax_galili
ENSORLG00015022089	-	70	63.492	ENSNBRG00000021776	apobec2a	89	58.036	Neolamprologus_brichardi
ENSORLG00015022089	-	100	77.985	ENSNBRG00000018806	apobec2b	89	77.239	Neolamprologus_brichardi
ENSORLG00015022089	-	69	60.209	ENSNLEG00000005057	APOBEC2	85	60.209	Nomascus_leucogenys
ENSORLG00015022089	-	69	57.368	ENSMEUG00000011623	APOBEC2	86	57.368	Notamacropus_eugenii
ENSORLG00015022089	-	69	59.686	ENSOPRG00000014808	APOBEC2	98	54.709	Ochotona_princeps
ENSORLG00015022089	-	69	58.639	ENSODEG00000016183	APOBEC2	97	54.299	Octodon_degus
ENSORLG00015022089	-	100	79.104	ENSONIG00000012289	apobec2b	100	79.104	Oreochromis_niloticus
ENSORLG00015022089	-	79	61.215	ENSONIG00000004644	-	86	61.215	Oreochromis_niloticus
ENSORLG00015022089	-	59	57.407	ENSOANG00000000824	APOBEC2	99	53.591	Ornithorhynchus_anatinus
ENSORLG00015022089	-	77	56.338	ENSOCUG00000028008	APOBEC2	98	54.709	Oryctolagus_cuniculus
ENSORLG00015022089	-	84	58.515	ENSORLG00000010752	apobec2a	96	58.515	Oryzias_latipes
ENSORLG00015022089	-	100	98.872	ENSORLG00000022372	APOBEC2	100	98.872	Oryzias_latipes
ENSORLG00015022089	-	100	99.248	ENSORLG00020006164	APOBEC2	100	99.248	Oryzias_latipes_hni
ENSORLG00015022089	-	84	58.515	ENSORLG00020004153	apobec2a	96	58.515	Oryzias_latipes_hni
ENSORLG00015022089	-	85	57.328	ENSOMEG00000001311	apobec2a	98	56.780	Oryzias_melastigma
ENSORLG00015022089	-	100	91.729	ENSOMEG00000015449	APOBEC2	100	91.729	Oryzias_melastigma
ENSORLG00015022089	-	77	55.000	ENSOGAG00000002632	APOBEC2	98	55.000	Otolemur_garnettii
ENSORLG00015022089	-	69	58.115	ENSOARG00000000820	APOBEC2	98	54.338	Ovis_aries
ENSORLG00015022089	-	69	60.209	ENSPPAG00000035598	APOBEC2	83	60.209	Pan_paniscus
ENSORLG00015022089	-	69	58.115	ENSPPRG00000008530	APOBEC2	98	53.636	Panthera_pardus
ENSORLG00015022089	-	69	58.115	ENSPTIG00000011084	APOBEC2	85	58.115	Panthera_tigris_altaica
ENSORLG00015022089	-	69	60.209	ENSPTRG00000029679	APOBEC2	83	60.209	Pan_troglodytes
ENSORLG00015022089	-	69	60.733	ENSPANG00000007121	APOBEC2	85	60.733	Papio_anubis
ENSORLG00015022089	-	95	58.077	ENSPKIG00000004741	apobec2b	84	60.944	Paramormyrops_kingsleyae
ENSORLG00015022089	-	92	55.823	ENSPKIG00000005395	apobec2a	98	56.667	Paramormyrops_kingsleyae
ENSORLG00015022089	-	68	58.378	ENSPSIG00000013480	APOBEC2	99	51.965	Pelodiscus_sinensis
ENSORLG00015022089	-	81	59.459	ENSPMGG00000004044	apobec2a	95	58.298	Periophthalmus_magnuspinnatus
ENSORLG00015022089	-	100	71.377	ENSPMGG00000002686	APOBEC2	80	70.741	Periophthalmus_magnuspinnatus
ENSORLG00015022089	-	69	59.162	ENSPEMG00000005724	Apobec2	85	59.162	Peromyscus_maniculatus_bairdii
ENSORLG00015022089	-	100	81.579	ENSPFOG00000001216	apobec2b	100	81.579	Poecilia_formosa
ENSORLG00015022089	-	100	80.827	ENSPLAG00000002074	apobec2b	100	80.827	Poecilia_latipinna
ENSORLG00015022089	-	100	81.955	ENSPMEG00000017537	apobec2b	100	81.955	Poecilia_mexicana
ENSORLG00015022089	-	100	82.707	ENSPREG00000020060	apobec2b	87	82.707	Poecilia_reticulata
ENSORLG00015022089	-	69	59.686	ENSPPYG00000016586	APOBEC2	85	59.686	Pongo_abelii
ENSORLG00015022089	-	69	59.686	ENSPCAG00000011433	APOBEC2	100	59.686	Procavia_capensis
ENSORLG00015022089	-	69	60.209	ENSPCOG00000026935	APOBEC2	98	55.455	Propithecus_coquereli
ENSORLG00015022089	-	69	58.639	ENSPVAG00000008316	APOBEC2	85	58.639	Pteropus_vampyrus
ENSORLG00015022089	-	100	78.731	ENSPNYG00000016747	apobec2b	100	78.731	Pundamilia_nyererei
ENSORLG00015022089	-	99	55.882	ENSPNAG00000010382	apobec2a	99	55.273	Pygocentrus_nattereri
ENSORLG00015022089	-	78	63.507	ENSPNAG00000013666	apobec2b	100	55.396	Pygocentrus_nattereri
ENSORLG00015022089	-	69	58.639	ENSRNOG00000012303	Apobec2	98	54.091	Rattus_norvegicus
ENSORLG00015022089	-	69	60.733	ENSRBIG00000044756	APOBEC2	85	60.733	Rhinopithecus_bieti
ENSORLG00015022089	-	69	60.733	ENSRROG00000030082	APOBEC2	85	60.733	Rhinopithecus_roxellana
ENSORLG00015022089	-	69	60.209	ENSSBOG00000028496	APOBEC2	85	60.209	Saimiri_boliviensis_boliviensis
ENSORLG00015022089	-	69	58.947	ENSSHAG00000017771	APOBEC2	86	58.947	Sarcophilus_harrisii
ENSORLG00015022089	-	63	56.213	ENSSFOG00015005437	-	71	56.213	Scleropages_formosus
ENSORLG00015022089	-	91	61.224	ENSSFOG00015022920	apobec2	81	64.159	Scleropages_formosus
ENSORLG00015022089	-	83	78.509	ENSSMAG00000005110	APOBEC2	100	76.364	Scophthalmus_maximus
ENSORLG00015022089	-	90	52.033	ENSSMAG00000001011	apobec2a	71	53.165	Scophthalmus_maximus
ENSORLG00015022089	-	100	52.222	ENSSDUG00000007013	apobec2a	87	59.091	Seriola_dumerili
ENSORLG00015022089	-	83	84.615	ENSSDUG00000014543	apobec2b	100	80.224	Seriola_dumerili
ENSORLG00015022089	-	83	84.615	ENSSLDG00000003321	apobec2b	100	80.224	Seriola_lalandi_dorsalis
ENSORLG00015022089	-	100	52.030	ENSSLDG00000020199	apobec2a	88	58.296	Seriola_lalandi_dorsalis
ENSORLG00015022089	-	64	53.933	ENSSPUG00000010839	APOBEC2	86	53.933	Sphenodon_punctatus
ENSORLG00015022089	-	100	51.481	ENSSPAG00000016299	-	96	56.170	Stegastes_partitus
ENSORLG00015022089	-	100	82.090	ENSSPAG00000005253	apobec2b	100	83.582	Stegastes_partitus
ENSORLG00015022089	-	69	58.639	ENSSSCG00000036018	APOBEC2	85	58.639	Sus_scrofa
ENSORLG00015022089	-	68	57.447	ENSTGUG00000018533	APOBEC2	99	52.752	Taeniopygia_guttata
ENSORLG00015022089	-	84	55.274	ENSTRUG00000009123	apobec2a	96	55.274	Takifugu_rubripes
ENSORLG00015022089	-	100	69.549	ENSTRUG00000012839	apobec2b	100	68.045	Takifugu_rubripes
ENSORLG00015022089	-	100	71.805	ENSTNIG00000015038	apobec2b	100	71.053	Tetraodon_nigroviridis
ENSORLG00015022089	-	69	58.639	ENSTBEG00000003553	APOBEC2	85	58.639	Tupaia_belangeri
ENSORLG00015022089	-	69	56.316	ENSTTRG00000013392	APOBEC2	85	56.316	Tursiops_truncatus
ENSORLG00015022089	-	69	58.639	ENSUAMG00000027667	APOBEC2	84	58.639	Ursus_americanus
ENSORLG00015022089	-	69	58.639	ENSVVUG00000026617	APOBEC2	85	58.639	Vulpes_vulpes
ENSORLG00015022089	-	77	47.297	ENSXETG00000008007	apobec2	92	47.297	Xenopus_tropicalis
ENSORLG00015022089	-	100	80.000	ENSXCOG00000007398	apobec2b	100	80.370	Xiphophorus_couchianus
ENSORLG00015022089	-	100	80.000	ENSXMAG00000008134	apobec2b	100	80.370	Xiphophorus_maculatus