EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015022294 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 6686 bases
Position: chr7:13563807-13570492
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015021094	RRM_1	PF00076.22	4.2e-36	1	2
ENSORLP00015021094	RRM_1	PF00076.22	4.2e-36	2	2
ENSORLP00015021088	RRM_1	PF00076.22	5.4e-36	1	2
ENSORLP00015021088	RRM_1	PF00076.22	5.4e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015030463	-	5720	-	ENSORLP00015021088	358 (aa)	-	-
ENSORLT00015030466	-	2009	-	ENSORLP00015021094	329 (aa)	-	-

Gene Model

Click here to download ENSORLG00015022294's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015022294's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015022294	-	59	81.538	ENSORLG00015014774	hnrnpa3	88	65.552
ENSORLG00015022294	-	56	42.135	ENSORLG00015003916	MSI1	56	42.529
ENSORLG00015022294	-	93	35.106	ENSORLG00015004592	msi2a	56	41.279
ENSORLG00015022294	-	89	43.522	ENSORLG00015017144	-	59	52.247
ENSORLG00015022294	-	54	51.149	ENSORLG00015016169	HNRNPA0	59	51.149
ENSORLG00015022294	-	88	42.122	ENSORLG00015016507	-	55	52.542
ENSORLG00015022294	-	61	35.000	ENSORLG00015005048	tardbpl	50	35.000
ENSORLG00015022294	-	56	50.877	ENSORLG00015015204	-	76	50.877
ENSORLG00015022294	-	54	46.893	ENSORLG00015016236	HNRNPA0	60	45.806
ENSORLG00015022294	-	50	55.056	ENSORLG00015016302	HNRNPA0	58	54.749
ENSORLG00015022294	-	52	38.824	ENSORLG00015022877	hnrnpaba	52	37.778
ENSORLG00015022294	-	53	39.306	ENSORLG00015014131	hnrnpabb	56	37.705
ENSORLG00015022294	-	54	51.429	ENSORLG00015016157	-	62	51.429
ENSORLG00015022294	-	73	38.430	ENSORLG00015002382	hnrnpd	67	39.891
ENSORLG00015022294	-	54	52.514	ENSORLG00015015182	-	77	52.809
ENSORLG00015022294	-	54	52.571	ENSORLG00015015185	-	63	52.874

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015022294	-	68	95.982	ENSAPOG00000019369	-	90	88.372	Acanthochromis_polyacanthus
ENSORLG00015022294	-	54	56.180	ENSACIG00000021815	-	87	56.180	Amphilophus_citrinellus
ENSORLG00015022294	-	68	95.982	ENSAOCG00000005289	-	100	89.222	Amphiprion_ocellaris
ENSORLG00015022294	-	68	95.982	ENSAPEG00000004179	-	100	89.222	Amphiprion_percula
ENSORLG00015022294	-	100	93.215	ENSATEG00000022918	hnrnpa1a	100	93.215	Anabas_testudineus
ENSORLG00015022294	-	53	59.748	ENSATEG00000003423	-	75	59.748	Anabas_testudineus
ENSORLG00015022294	-	51	56.593	ENSACAG00000017109	-	57	55.376	Anolis_carolinensis
ENSORLG00015022294	-	95	93.458	ENSACLG00000006940	-	95	93.458	Astatotilapia_calliptera
ENSORLG00015022294	-	56	85.326	ENSAMXG00000006296	hnrnpa1a	88	58.967	Astyanax_mexicanus
ENSORLG00015022294	-	55	63.277	ENSAMXG00000037730	-	85	54.795	Astyanax_mexicanus
ENSORLG00015022294	-	54	55.814	ENSCSEG00000014051	-	73	54.237	Cynoglossus_semilaevis
ENSORLG00015022294	-	100	81.325	ENSCSEG00000007589	hnrnpa1a	99	79.118	Cynoglossus_semilaevis
ENSORLG00015022294	-	69	93.363	ENSCVAG00000012637	hnrnpa1a	90	82.295	Cyprinodon_variegatus
ENSORLG00015022294	-	57	56.477	ENSDORG00000026425	-	79	48.000	Dipodomys_ordii
ENSORLG00015022294	-	59	89.175	ENSELUG00000007372	-	51	90.164	Esox_lucius
ENSORLG00015022294	-	56	61.667	ENSGMOG00000020353	-	94	62.011	Gadus_morhua
ENSORLG00015022294	-	90	83.279	ENSGAFG00000007751	-	90	82.623	Gambusia_affinis
ENSORLG00015022294	-	54	53.933	ENSGAFG00000016803	-	54	53.631	Gambusia_affinis
ENSORLG00015022294	-	64	92.135	ENSGACG00000009435	-	87	80.377	Gasterosteus_aculeatus
ENSORLG00015022294	-	97	84.789	ENSHBUG00000005647	hnrnpa1a	91	90.461	Haplochromis_burtoni
ENSORLG00015022294	-	56	62.921	ENSIPUG00000001991	-	77	62.921	Ictalurus_punctatus
ENSORLG00015022294	-	60	83.163	ENSIPUG00000002023	hnrnpa1a	76	86.286	Ictalurus_punctatus
ENSORLG00015022294	-	59	84.021	ENSIPUG00000022440	-	72	85.030	Ictalurus_punctatus
ENSORLG00015022294	-	55	66.851	ENSJJAG00000009178	-	89	49.704	Jaculus_jaculus
ENSORLG00015022294	-	68	95.982	ENSKMAG00000020859	-	89	89.701	Kryptolebias_marmoratus
ENSORLG00015022294	-	68	91.150	ENSLBEG00000010010	hnrnpa1a	91	81.905	Labrus_bergylta
ENSORLG00015022294	-	57	72.432	ENSMFAG00000028351	-	90	60.927	Macaca_fascicularis
ENSORLG00015022294	-	95	92.049	ENSMAMG00000007606	-	95	92.049	Mastacembelus_armatus
ENSORLG00015022294	-	97	85.070	ENSMZEG00005027173	hnrnpa1a	91	90.461	Maylandia_zebra
ENSORLG00015022294	-	83	75.458	ENSMMOG00000008251	hnrnpa1a	91	87.273	Mola_mola
ENSORLG00015022294	-	100	91.618	ENSMALG00000014091	hnrnpa1a	100	91.618	Monopterus_albus
ENSORLG00015022294	-	54	56.497	ENSMALG00000008886	-	86	56.497	Monopterus_albus
ENSORLG00015022294	-	58	58.511	ENSNBRG00000014469	-	82	60.227	Neolamprologus_brichardi
ENSORLG00015022294	-	97	84.746	ENSNBRG00000018441	-	91	90.429	Neolamprologus_brichardi
ENSORLG00015022294	-	100	99.696	ENSORLG00000008001	-	100	99.696	Oryzias_latipes
ENSORLG00015022294	-	55	51.977	ENSORLG00000029240	-	94	52.874	Oryzias_latipes
ENSORLG00015022294	-	54	51.977	ENSORLG00020022498	-	84	52.874	Oryzias_latipes_hni
ENSORLG00015022294	-	54	51.724	ENSORLG00020006043	-	59	51.724	Oryzias_latipes_hni
ENSORLG00015022294	-	100	99.696	ENSORLG00020006582	hnrnpa1a	100	99.696	Oryzias_latipes_hni
ENSORLG00015022294	-	100	98.788	ENSOMEG00000015959	-	100	98.788	Oryzias_melastigma
ENSORLG00015022294	-	57	56.831	ENSPMGG00000016392	-	93	58.101	Periophthalmus_magnuspinnatus
ENSORLG00015022294	-	71	81.197	ENSPMGG00000011804	hnrnpa1a	84	79.310	Periophthalmus_magnuspinnatus
ENSORLG00015022294	-	69	96.460	ENSPFOG00000001825	-	100	83.481	Poecilia_formosa
ENSORLG00015022294	-	69	96.460	ENSPMEG00000002425	-	100	83.481	Poecilia_mexicana
ENSORLG00015022294	-	58	58.511	ENSPNYG00000020729	-	90	60.227	Pundamilia_nyererei
ENSORLG00015022294	-	57	86.096	ENSPNAG00000021630	-	57	85.027	Pygocentrus_nattereri
ENSORLG00015022294	-	53	86.842	ENSPNAG00000007752	hnrnpa1a	72	85.635	Pygocentrus_nattereri
ENSORLG00015022294	-	54	59.639	ENSSMAG00000010279	-	93	59.639	Scophthalmus_maximus
ENSORLG00015022294	-	53	55.682	ENSSMAG00000010246	-	79	55.367	Scophthalmus_maximus
ENSORLG00015022294	-	74	93.855	ENSSMAG00000004641	hnrnpa1a	90	80.126	Scophthalmus_maximus
ENSORLG00015022294	-	54	60.819	ENSSDUG00000002431	-	82	60.116	Seriola_dumerili
ENSORLG00015022294	-	90	96.891	ENSSDUG00000013908	hnrnpa1a	85	100.000	Seriola_dumerili
ENSORLG00015022294	-	89	97.826	ENSSLDG00000003718	hnrnpa1a	88	96.791	Seriola_lalandi_dorsalis
ENSORLG00015022294	-	91	90.698	ENSSPAG00000018518	-	90	90.268	Stegastes_partitus
ENSORLG00015022294	-	68	89.333	ENSTRUG00000020491	-	91	81.271	Takifugu_rubripes
ENSORLG00015022294	-	74	49.167	ENSTNIG00000007398	-	69	61.453	Tetraodon_nigroviridis
ENSORLG00015022294	-	83	79.412	ENSXCOG00000009001	-	92	93.519	Xiphophorus_couchianus
ENSORLG00015022294	-	69	96.903	ENSXMAG00000008076	-	90	82.410	Xiphophorus_maculatus