EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015022379 (Gene tree)
Gene ID: -
Gene Symbol: snrnp48
Alias: -
Full Name: small nuclear ribonucleoprotein 48 (U11/U12)
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 4753 bases
Position: chr16:27145096-27149848
Accession: ZDB-GENE-030131-4482
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015035678	zf-U11-48K	PF05253.12	9.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015036326	-	1194	-	ENSORLP00015035678	397 (aa)	-	-

Gene Model

Click here to download ENSORLG00015022379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015022379's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015022379	snrnp48	71	47.586	ENSG00000168566	SNRNP48	88	46.753	Homo_sapiens
ENSORLG00015022379	snrnp48	81	79.630	ENSAPOG00000021430	snrnp48	88	78.523	Acanthochromis_polyacanthus
ENSORLG00015022379	snrnp48	82	46.243	ENSAMEG00000017349	SNRNP48	89	47.742	Ailuropoda_melanoleuca
ENSORLG00015022379	snrnp48	79	73.817	ENSACIG00000002032	snrnp48	87	72.973	Amphilophus_citrinellus
ENSORLG00015022379	snrnp48	81	79.630	ENSAOCG00000010562	snrnp48	88	77.852	Amphiprion_ocellaris
ENSORLG00015022379	snrnp48	81	79.257	ENSAPEG00000003231	snrnp48	88	79.125	Amphiprion_percula
ENSORLG00015022379	snrnp48	79	79.747	ENSATEG00000020210	snrnp48	88	79.252	Anabas_testudineus
ENSORLG00015022379	snrnp48	69	50.512	ENSACAG00000002811	SNRNP48	80	51.737	Anolis_carolinensis
ENSORLG00015022379	snrnp48	71	47.931	ENSANAG00000033538	SNRNP48	88	47.078	Aotus_nancymaae
ENSORLG00015022379	snrnp48	80	56.250	ENSAMXG00000015309	snrnp48	89	57.288	Astyanax_mexicanus
ENSORLG00015022379	snrnp48	77	44.910	ENSBTAG00000001123	SNRNP48	87	46.885	Bos_taurus
ENSORLG00015022379	snrnp48	71	47.931	ENSCJAG00000021330	SNRNP48	88	47.078	Callithrix_jacchus
ENSORLG00015022379	snrnp48	80	44.868	ENSCAFG00000009574	SNRNP48	74	46.104	Canis_familiaris
ENSORLG00015022379	snrnp48	80	44.868	ENSCAFG00020013203	SNRNP48	88	46.104	Canis_lupus_dingo
ENSORLG00015022379	snrnp48	77	45.210	ENSCHIG00000015216	SNRNP48	89	46.774	Capra_hircus
ENSORLG00015022379	snrnp48	69	48.772	ENSTSYG00000000698	SNRNP48	87	47.525	Carlito_syrichta
ENSORLG00015022379	snrnp48	73	45.714	ENSCAPG00000006768	SNRNP48	88	48.014	Cavia_aperea
ENSORLG00015022379	snrnp48	81	44.798	ENSCPOG00000007910	SNRNP48	88	46.753	Cavia_porcellus
ENSORLG00015022379	snrnp48	71	47.586	ENSCCAG00000035652	SNRNP48	88	46.753	Cebus_capucinus
ENSORLG00015022379	snrnp48	81	44.798	ENSCATG00000033947	SNRNP48	88	46.753	Cercocebus_atys
ENSORLG00015022379	snrnp48	69	48.772	ENSCLAG00000003765	SNRNP48	87	47.855	Chinchilla_lanigera
ENSORLG00015022379	snrnp48	71	47.931	ENSCSAG00000007409	SNRNP48	88	46.753	Chlorocebus_sabaeus
ENSORLG00015022379	snrnp48	71	48.837	ENSCPBG00000019146	SNRNP48	78	51.807	Chrysemys_picta_bellii
ENSORLG00015022379	snrnp48	71	47.931	ENSCANG00000030017	SNRNP48	88	47.078	Colobus_angolensis_palliatus
ENSORLG00015022379	snrnp48	71	41.438	ENSCGRG00001008805	-	72	44.872	Cricetulus_griseus_chok1gshd
ENSORLG00015022379	snrnp48	82	45.161	ENSCGRG00001001076	-	97	44.838	Cricetulus_griseus_chok1gshd
ENSORLG00015022379	snrnp48	82	45.161	ENSCGRG00000007781	Snrnp48	97	44.838	Cricetulus_griseus_crigri
ENSORLG00015022379	snrnp48	66	69.288	ENSCSEG00000000722	snrnp48	84	65.993	Cynoglossus_semilaevis
ENSORLG00015022379	snrnp48	78	75.159	ENSCVAG00000019829	snrnp48	77	77.852	Cyprinodon_variegatus
ENSORLG00015022379	snrnp48	77	53.605	ENSDARG00000039989	snrnp48	87	55.068	Danio_rerio
ENSORLG00015022379	snrnp48	72	47.973	ENSDNOG00000014978	SNRNP48	89	46.815	Dasypus_novemcinctus
ENSORLG00015022379	snrnp48	81	44.092	ENSDORG00000015140	Snrnp48	89	45.307	Dipodomys_ordii
ENSORLG00015022379	snrnp48	71	47.079	ENSEASG00005012021	SNRNP48	89	45.955	Equus_asinus_asinus
ENSORLG00015022379	snrnp48	71	47.423	ENSECAG00000026937	SNRNP48	89	46.278	Equus_caballus
ENSORLG00015022379	snrnp48	82	33.043	ENSEEUG00000015437	SNRNP48	97	32.059	Erinaceus_europaeus
ENSORLG00015022379	snrnp48	75	61.688	ENSELUG00000009766	snrnp48	85	61.765	Esox_lucius
ENSORLG00015022379	snrnp48	71	47.241	ENSFCAG00000018853	SNRNP48	88	46.104	Felis_catus
ENSORLG00015022379	snrnp48	58	57.261	ENSFALG00000007797	SNRNP48	76	55.833	Ficedula_albicollis
ENSORLG00015022379	snrnp48	81	45.087	ENSFDAG00000009231	SNRNP48	88	47.403	Fukomys_damarensis
ENSORLG00015022379	snrnp48	55	79.646	ENSFHEG00000014647	snrnp48	86	78.715	Fundulus_heteroclitus
ENSORLG00015022379	snrnp48	75	61.321	ENSGMOG00000018599	-	95	62.171	Gadus_morhua
ENSORLG00015022379	snrnp48	64	54.307	ENSGALG00000013005	SNRNP48	86	54.264	Gallus_gallus
ENSORLG00015022379	snrnp48	80	69.939	ENSGAFG00000021639	snrnp48	87	72.483	Gambusia_affinis
ENSORLG00015022379	snrnp48	61	76.423	ENSGACG00000017756	-	90	72.093	Gasterosteus_aculeatus
ENSORLG00015022379	snrnp48	71	47.176	ENSGAGG00000000865	SNRNP48	81	51.406	Gopherus_agassizii
ENSORLG00015022379	snrnp48	71	47.931	ENSGGOG00000013220	SNRNP48	88	47.078	Gorilla_gorilla
ENSORLG00015022379	snrnp48	79	77.918	ENSHBUG00000017066	snrnp48	87	78.114	Haplochromis_burtoni
ENSORLG00015022379	snrnp48	71	47.931	ENSHGLG00000015241	SNRNP48	88	45.779	Heterocephalus_glaber_female
ENSORLG00015022379	snrnp48	71	47.931	ENSHGLG00100010027	SNRNP48	88	45.779	Heterocephalus_glaber_male
ENSORLG00015022379	snrnp48	68	67.730	ENSHCOG00000014066	snrnp48	88	66.885	Hippocampus_comes
ENSORLG00015022379	snrnp48	71	47.931	ENSSTOG00000014635	SNRNP48	88	47.078	Ictidomys_tridecemlineatus
ENSORLG00015022379	snrnp48	70	48.789	ENSJJAG00000011495	Snrnp48	88	47.557	Jaculus_jaculus
ENSORLG00015022379	snrnp48	80	74.534	ENSKMAG00000016514	snrnp48	88	76.094	Kryptolebias_marmoratus
ENSORLG00015022379	snrnp48	69	75.812	ENSLBEG00000026249	snrnp48	88	75.503	Labrus_bergylta
ENSORLG00015022379	snrnp48	79	47.661	ENSLACG00000003958	SNRNP48	71	53.878	Latimeria_chalumnae
ENSORLG00015022379	snrnp48	69	63.309	ENSLOCG00000004187	snrnp48	87	61.149	Lepisosteus_oculatus
ENSORLG00015022379	snrnp48	69	47.203	ENSLAFG00000011152	SNRNP48	87	46.053	Loxodonta_africana
ENSORLG00015022379	snrnp48	71	47.931	ENSMFAG00000045216	SNRNP48	88	46.753	Macaca_fascicularis
ENSORLG00015022379	snrnp48	71	47.931	ENSMMUG00000014785	SNRNP48	88	46.753	Macaca_mulatta
ENSORLG00015022379	snrnp48	71	47.931	ENSMNEG00000042269	SNRNP48	88	46.753	Macaca_nemestrina
ENSORLG00015022379	snrnp48	71	47.931	ENSMLEG00000034004	SNRNP48	88	46.753	Mandrillus_leucophaeus
ENSORLG00015022379	snrnp48	82	74.618	ENSMAMG00000018673	snrnp48	78	73.597	Mastacembelus_armatus
ENSORLG00015022379	snrnp48	71	52.145	ENSMGAG00000006037	SNRNP48	81	55.967	Meleagris_gallopavo
ENSORLG00015022379	snrnp48	82	44.737	ENSMAUG00000011944	Snrnp48	98	44.706	Mesocricetus_auratus
ENSORLG00015022379	snrnp48	71	47.079	ENSMICG00000012497	SNRNP48	88	46.753	Microcebus_murinus
ENSORLG00015022379	snrnp48	82	45.190	ENSMOCG00000015555	Snrnp48	98	45.161	Microtus_ochrogaster
ENSORLG00015022379	snrnp48	72	46.205	ENSMODG00000009996	SNRNP48	85	45.860	Monodelphis_domestica
ENSORLG00015022379	snrnp48	80	73.602	ENSMALG00000005725	snrnp48	88	74.747	Monopterus_albus
ENSORLG00015022379	snrnp48	81	45.376	MGP_CAROLIEiJ_G0018441	Snrnp48	89	47.403	Mus_caroli
ENSORLG00015022379	snrnp48	81	45.376	ENSMUSG00000021431	Snrnp48	89	47.403	Mus_musculus
ENSORLG00015022379	snrnp48	81	46.243	MGP_PahariEiJ_G0019509	Snrnp48	89	48.052	Mus_pahari
ENSORLG00015022379	snrnp48	81	45.665	MGP_SPRETEiJ_G0019321	Snrnp48	89	47.403	Mus_spretus
ENSORLG00015022379	snrnp48	81	46.243	ENSNGAG00000004849	Snrnp48	88	48.052	Nannospalax_galili
ENSORLG00015022379	snrnp48	86	77.551	ENSNBRG00000012127	snrnp48	87	78.451	Neolamprologus_brichardi
ENSORLG00015022379	snrnp48	71	47.931	ENSNLEG00000011667	SNRNP48	88	47.078	Nomascus_leucogenys
ENSORLG00015022379	snrnp48	70	48.084	ENSOPRG00000015471	SNRNP48	92	47.368	Ochotona_princeps
ENSORLG00015022379	snrnp48	79	78.864	ENSONIG00000001520	snrnp48	87	78.788	Oreochromis_niloticus
ENSORLG00015022379	snrnp48	67	48.364	ENSOCUG00000005168	SNRNP48	99	47.078	Oryctolagus_cuniculus
ENSORLG00015022379	snrnp48	86	97.361	ENSORLG00000015654	snrnp48	100	97.361	Oryzias_latipes
ENSORLG00015022379	snrnp48	81	97.826	ENSORLG00020015976	snrnp48	94	86.364	Oryzias_latipes_hni
ENSORLG00015022379	snrnp48	79	90.446	ENSOMEG00000022007	snrnp48	87	91.156	Oryzias_melastigma
ENSORLG00015022379	snrnp48	70	47.569	ENSOGAG00000005275	SNRNP48	90	46.405	Otolemur_garnettii
ENSORLG00015022379	snrnp48	69	47.619	ENSOARG00000017319	SNRNP48	86	50.980	Ovis_aries
ENSORLG00015022379	snrnp48	71	47.931	ENSPPAG00000032873	SNRNP48	88	47.078	Pan_paniscus
ENSORLG00015022379	snrnp48	71	47.241	ENSPPRG00000004283	SNRNP48	88	46.104	Panthera_pardus
ENSORLG00015022379	snrnp48	58	51.695	ENSPTIG00000013502	SNRNP48	86	50.000	Panthera_tigris_altaica
ENSORLG00015022379	snrnp48	71	47.931	ENSPTRG00000017703	SNRNP48	88	47.078	Pan_troglodytes
ENSORLG00015022379	snrnp48	71	47.931	ENSPANG00000000771	SNRNP48	88	46.753	Papio_anubis
ENSORLG00015022379	snrnp48	69	60.284	ENSPKIG00000013703	snrnp48	60	59.220	Paramormyrops_kingsleyae
ENSORLG00015022379	snrnp48	69	47.811	ENSPSIG00000002213	SNRNP48	76	51.837	Pelodiscus_sinensis
ENSORLG00015022379	snrnp48	66	62.082	ENSPMGG00000008120	snrnp48	92	63.707	Periophthalmus_magnuspinnatus
ENSORLG00015022379	snrnp48	82	44.225	ENSPEMG00000008872	Snrnp48	97	45.723	Peromyscus_maniculatus_bairdii
ENSORLG00015022379	snrnp48	80	73.006	ENSPFOG00000003578	snrnp48	87	73.154	Poecilia_formosa
ENSORLG00015022379	snrnp48	59	74.576	ENSPLAG00000002290	snrnp48	82	74.576	Poecilia_latipinna
ENSORLG00015022379	snrnp48	80	73.006	ENSPMEG00000018033	snrnp48	87	73.154	Poecilia_mexicana
ENSORLG00015022379	snrnp48	80	71.472	ENSPREG00000018541	snrnp48	87	73.826	Poecilia_reticulata
ENSORLG00015022379	snrnp48	71	47.241	ENSPPYG00000016209	SNRNP48	88	46.429	Pongo_abelii
ENSORLG00015022379	snrnp48	59	39.184	ENSPCAG00000011991	SNRNP48	93	39.044	Procavia_capensis
ENSORLG00015022379	snrnp48	70	47.917	ENSPVAG00000002854	SNRNP48	88	47.059	Pteropus_vampyrus
ENSORLG00015022379	snrnp48	77	78.317	ENSPNYG00000015399	snrnp48	95	79.125	Pundamilia_nyererei
ENSORLG00015022379	snrnp48	82	45.455	ENSRNOG00000013756	Snrnp48	89	47.403	Rattus_norvegicus
ENSORLG00015022379	snrnp48	71	47.931	ENSRBIG00000043856	SNRNP48	95	46.753	Rhinopithecus_bieti
ENSORLG00015022379	snrnp48	71	47.931	ENSRROG00000043229	SNRNP48	88	46.753	Rhinopithecus_roxellana
ENSORLG00015022379	snrnp48	71	48.276	ENSSBOG00000019486	SNRNP48	88	47.403	Saimiri_boliviensis_boliviensis
ENSORLG00015022379	snrnp48	70	47.973	ENSSHAG00000014483	SNRNP48	89	47.419	Sarcophilus_harrisii
ENSORLG00015022379	snrnp48	60	60.887	ENSSFOG00015006610	snrnp48	72	59.934	Scleropages_formosus
ENSORLG00015022379	snrnp48	80	75.862	ENSSDUG00000014953	snrnp48	88	76.871	Seriola_dumerili
ENSORLG00015022379	snrnp48	80	75.862	ENSSLDG00000005989	snrnp48	88	76.871	Seriola_lalandi_dorsalis
ENSORLG00015022379	snrnp48	69	47.651	ENSSPUG00000006257	SNRNP48	71	50.400	Sphenodon_punctatus
ENSORLG00015022379	snrnp48	80	78.328	ENSSPAG00000006454	snrnp48	88	78.188	Stegastes_partitus
ENSORLG00015022379	snrnp48	69	50.331	ENSTGUG00000007575	SNRNP48	84	52.852	Taeniopygia_guttata
ENSORLG00015022379	snrnp48	80	64.396	ENSTRUG00000007031	snrnp48	88	70.134	Takifugu_rubripes
ENSORLG00015022379	snrnp48	80	67.702	ENSTNIG00000012977	-	86	67.114	Tetraodon_nigroviridis
ENSORLG00015022379	snrnp48	63	48.462	ENSTBEG00000015620	SNRNP48	75	48.047	Tupaia_belangeri
ENSORLG00015022379	snrnp48	78	45.427	ENSTTRG00000016715	SNRNP48	88	47.231	Tursiops_truncatus
ENSORLG00015022379	snrnp48	82	46.647	ENSUAMG00000003690	SNRNP48	88	47.557	Ursus_americanus
ENSORLG00015022379	snrnp48	58	52.743	ENSVPAG00000003557	SNRNP48	86	51.373	Vicugna_pacos
ENSORLG00015022379	snrnp48	80	44.868	ENSVVUG00000004996	SNRNP48	88	46.104	Vulpes_vulpes
ENSORLG00015022379	snrnp48	74	46.865	ENSXETG00000020447	snrnp48	88	47.138	Xenopus_tropicalis
ENSORLG00015022379	snrnp48	59	74.684	ENSXCOG00000004478	snrnp48	86	67.003	Xiphophorus_couchianus
ENSORLG00015022379	snrnp48	80	73.780	ENSXMAG00000013595	snrnp48	87	73.667	Xiphophorus_maculatus