EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015022454 (Gene tree)
Gene ID: -
Gene Symbol: sf3b2
Alias: -
Full Name: splicing factor 3b%2C subunit 2
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 15237 bases
Position: chr18:18986380-19001616
Accession: ZDB-GENE-070928-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015021210	DUF382	PF04037.13	1.6e-58	1	1
ENSORLP00015021230	DUF382	PF04037.13	2.5e-58	1	1
ENSORLP00015021230	SAP	PF02037.27	8.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015030630	-	4481	-	ENSORLP00015021230	953 (aa)	-	-
ENSORLT00015030607	-	2130	-	ENSORLP00015021210	709 (aa)	-	-

Gene Model

Click here to download ENSORLG00015022454's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015022454's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015022454	sf3b2	82	78.323	ENSG00000087365	SF3B2	99	91.483	Homo_sapiens
ENSORLG00015022454	sf3b2	84	93.974	ENSAPOG00000001974	sf3b2	96	82.803	Acanthochromis_polyacanthus
ENSORLG00015022454	sf3b2	82	78.357	ENSAMEG00000017206	SF3B2	97	66.966	Ailuropoda_melanoleuca
ENSORLG00015022454	sf3b2	92	77.559	ENSACIG00000000624	sf3b2	100	83.638	Amphilophus_citrinellus
ENSORLG00015022454	sf3b2	83	95.076	ENSAOCG00000009207	sf3b2	100	82.743	Amphiprion_ocellaris
ENSORLG00015022454	sf3b2	84	94.382	ENSAPEG00000002762	sf3b2	100	82.589	Amphiprion_percula
ENSORLG00015022454	sf3b2	82	64.984	ENSACAG00000008615	SF3B2	98	56.059	Anolis_carolinensis
ENSORLG00015022454	sf3b2	82	78.323	ENSANAG00000029120	SF3B2	97	67.568	Aotus_nancymaae
ENSORLG00015022454	sf3b2	88	87.427	ENSACLG00000014771	sf3b2	100	87.854	Astatotilapia_calliptera
ENSORLG00015022454	sf3b2	89	80.577	ENSAMXG00000007929	sf3b2	98	78.571	Astyanax_mexicanus
ENSORLG00015022454	sf3b2	82	77.638	ENSBTAG00000002778	SF3B2	97	68.223	Bos_taurus
ENSORLG00015022454	sf3b2	77	49.209	WBGene00021004	sftb-2	97	47.492	Caenorhabditis_elegans
ENSORLG00015022454	sf3b2	82	78.323	ENSCJAG00000001656	SF3B2	97	67.680	Callithrix_jacchus
ENSORLG00015022454	sf3b2	82	78.481	ENSCAFG00000013033	SF3B2	97	67.117	Canis_familiaris
ENSORLG00015022454	sf3b2	82	78.481	ENSCAFG00020015382	SF3B2	97	67.117	Canis_lupus_dingo
ENSORLG00015022454	sf3b2	82	77.638	ENSCHIG00000011211	SF3B2	97	66.892	Capra_hircus
ENSORLG00015022454	sf3b2	82	78.165	ENSTSYG00000000959	SF3B2	97	67.342	Carlito_syrichta
ENSORLG00015022454	sf3b2	59	60.235	ENSCAPG00000006065	SF3B2	96	90.678	Cavia_aperea
ENSORLG00015022454	sf3b2	70	76.007	ENSCPOG00000008294	SF3B2	97	64.115	Cavia_porcellus
ENSORLG00015022454	sf3b2	82	78.323	ENSCCAG00000035256	SF3B2	97	67.680	Cebus_capucinus
ENSORLG00015022454	sf3b2	82	78.323	ENSCATG00000042240	SF3B2	97	68.851	Cercocebus_atys
ENSORLG00015022454	sf3b2	82	78.006	ENSCLAG00000016852	SF3B2	97	67.698	Chinchilla_lanigera
ENSORLG00015022454	sf3b2	82	78.323	ENSCSAG00000008121	SF3B2	97	67.568	Chlorocebus_sabaeus
ENSORLG00015022454	sf3b2	73	89.796	ENSCHOG00000001476	SF3B2	90	82.143	Choloepus_hoffmanni
ENSORLG00015022454	sf3b2	95	70.937	ENSCPBG00000022465	SF3B2	98	72.752	Chrysemys_picta_bellii
ENSORLG00015022454	sf3b2	74	67.932	ENSCING00000005665	-	100	59.014	Ciona_intestinalis
ENSORLG00015022454	sf3b2	75	67.542	ENSCSAVG00000002029	-	99	59.744	Ciona_savignyi
ENSORLG00015022454	sf3b2	82	78.323	ENSCANG00000039680	SF3B2	97	67.568	Colobus_angolensis_palliatus
ENSORLG00015022454	sf3b2	82	78.323	ENSCGRG00001015741	Sf3b2	97	66.516	Cricetulus_griseus_chok1gshd
ENSORLG00015022454	sf3b2	82	78.323	ENSCGRG00000018110	Sf3b2	97	68.281	Cricetulus_griseus_crigri
ENSORLG00015022454	sf3b2	91	76.967	ENSCSEG00000000230	sf3b2	100	75.350	Cynoglossus_semilaevis
ENSORLG00015022454	sf3b2	91	79.673	ENSCVAG00000003357	sf3b2	100	80.831	Cyprinodon_variegatus
ENSORLG00015022454	sf3b2	83	80.599	ENSDARG00000018049	sf3b2	100	72.077	Danio_rerio
ENSORLG00015022454	sf3b2	82	78.165	ENSDNOG00000009484	SF3B2	97	71.302	Dasypus_novemcinctus
ENSORLG00015022454	sf3b2	82	78.165	ENSDORG00000002495	Sf3b2	97	67.043	Dipodomys_ordii
ENSORLG00015022454	sf3b2	61	82.258	ENSETEG00000020284	SF3B2	84	82.051	Echinops_telfairi
ENSORLG00015022454	sf3b2	74	76.592	ENSEBUG00000013703	sf3b2	86	63.520	Eptatretus_burgeri
ENSORLG00015022454	sf3b2	82	78.481	ENSEASG00005004508	SF3B2	97	67.154	Equus_asinus_asinus
ENSORLG00015022454	sf3b2	82	78.481	ENSECAG00000024461	SF3B2	97	67.154	Equus_caballus
ENSORLG00015022454	sf3b2	52	87.500	ENSEEUG00000014278	-	53	87.500	Erinaceus_europaeus
ENSORLG00015022454	sf3b2	87	88.172	ENSELUG00000005586	sf3b2	100	74.674	Esox_lucius
ENSORLG00015022454	sf3b2	82	78.481	ENSFCAG00000013289	SF3B2	97	67.117	Felis_catus
ENSORLG00015022454	sf3b2	82	68.211	ENSFALG00000014653	SF3B2	91	67.939	Ficedula_albicollis
ENSORLG00015022454	sf3b2	82	77.394	ENSFDAG00000019806	SF3B2	97	67.416	Fukomys_damarensis
ENSORLG00015022454	sf3b2	91	77.973	ENSFHEG00000020968	sf3b2	100	80.092	Fundulus_heteroclitus
ENSORLG00015022454	sf3b2	83	80.696	ENSGMOG00000012131	sf3b2	100	85.909	Gadus_morhua
ENSORLG00015022454	sf3b2	90	95.644	ENSGAFG00000001675	sf3b2	100	81.537	Gambusia_affinis
ENSORLG00015022454	sf3b2	74	92.655	ENSGACG00000019012	sf3b2	100	87.082	Gasterosteus_aculeatus
ENSORLG00015022454	sf3b2	82	78.323	ENSGAGG00000023916	SF3B2	98	68.743	Gopherus_agassizii
ENSORLG00015022454	sf3b2	82	78.323	ENSGGOG00000028448	SF3B2	97	90.986	Gorilla_gorilla
ENSORLG00015022454	sf3b2	95	80.645	ENSHBUG00000017349	sf3b2	100	87.854	Haplochromis_burtoni
ENSORLG00015022454	sf3b2	82	78.006	ENSHGLG00000010807	SF3B2	97	66.403	Heterocephalus_glaber_female
ENSORLG00015022454	sf3b2	82	78.006	ENSHGLG00100006361	SF3B2	97	67.342	Heterocephalus_glaber_male
ENSORLG00015022454	sf3b2	95	72.890	ENSHCOG00000016203	sf3b2	100	77.998	Hippocampus_comes
ENSORLG00015022454	sf3b2	83	79.688	ENSIPUG00000009383	sf3b2	100	72.676	Ictalurus_punctatus
ENSORLG00015022454	sf3b2	82	78.165	ENSSTOG00000028892	SF3B2	97	67.342	Ictidomys_tridecemlineatus
ENSORLG00015022454	sf3b2	82	78.165	ENSJJAG00000018193	Sf3b2	97	66.065	Jaculus_jaculus
ENSORLG00015022454	sf3b2	90	94.697	ENSKMAG00000020181	sf3b2	100	82.240	Kryptolebias_marmoratus
ENSORLG00015022454	sf3b2	94	77.530	ENSLBEG00000027739	sf3b2	100	84.036	Labrus_bergylta
ENSORLG00015022454	sf3b2	82	79.528	ENSLACG00000010429	SF3B2	100	66.667	Latimeria_chalumnae
ENSORLG00015022454	sf3b2	82	77.638	ENSLAFG00000002128	SF3B2	97	66.063	Loxodonta_africana
ENSORLG00015022454	sf3b2	82	78.199	ENSMFAG00000003064	SF3B2	97	68.772	Macaca_fascicularis
ENSORLG00015022454	sf3b2	82	72.943	ENSMMUG00000011743	SF3B2	97	63.801	Macaca_mulatta
ENSORLG00015022454	sf3b2	82	78.323	ENSMNEG00000034437	SF3B2	97	68.851	Macaca_nemestrina
ENSORLG00015022454	sf3b2	82	77.795	ENSMLEG00000029373	SF3B2	97	68.851	Mandrillus_leucophaeus
ENSORLG00015022454	sf3b2	88	82.393	ENSMAMG00000014103	sf3b2	100	85.131	Mastacembelus_armatus
ENSORLG00015022454	sf3b2	88	85.352	ENSMZEG00005020789	sf3b2	100	86.227	Maylandia_zebra
ENSORLG00015022454	sf3b2	51	89.779	ENSMAUG00000017040	Sf3b2	94	89.779	Mesocricetus_auratus
ENSORLG00015022454	sf3b2	82	77.600	ENSMICG00000016942	-	97	67.133	Microcebus_murinus
ENSORLG00015022454	sf3b2	82	78.165	ENSMICG00000008565	-	97	67.680	Microcebus_murinus
ENSORLG00015022454	sf3b2	82	78.165	ENSMOCG00000003136	Sf3b2	97	66.516	Microtus_ochrogaster
ENSORLG00015022454	sf3b2	94	75.526	ENSMMOG00000012928	sf3b2	100	79.123	Mola_mola
ENSORLG00015022454	sf3b2	82	73.217	ENSMODG00000025020	-	99	72.939	Monodelphis_domestica
ENSORLG00015022454	sf3b2	82	78.268	ENSMODG00000008490	-	96	71.036	Monodelphis_domestica
ENSORLG00015022454	sf3b2	94	77.718	ENSMALG00000015137	sf3b2	100	79.224	Monopterus_albus
ENSORLG00015022454	sf3b2	82	77.638	MGP_CAROLIEiJ_G0022539	Sf3b2	97	66.591	Mus_caroli
ENSORLG00015022454	sf3b2	82	78.165	ENSMUSG00000024853	Sf3b2	97	66.290	Mus_musculus
ENSORLG00015022454	sf3b2	82	78.006	MGP_PahariEiJ_G0014036	Sf3b2	97	66.176	Mus_pahari
ENSORLG00015022454	sf3b2	82	78.165	MGP_SPRETEiJ_G0023453	Sf3b2	97	66.290	Mus_spretus
ENSORLG00015022454	sf3b2	82	78.481	ENSMPUG00000011349	SF3B2	97	67.117	Mustela_putorius_furo
ENSORLG00015022454	sf3b2	82	78.165	ENSMLUG00000011136	SF3B2	97	68.337	Myotis_lucifugus
ENSORLG00015022454	sf3b2	82	77.480	ENSNGAG00000012103	Sf3b2	97	66.251	Nannospalax_galili
ENSORLG00015022454	sf3b2	82	75.195	ENSNLEG00000006007	SF3B2	97	65.984	Nomascus_leucogenys
ENSORLG00015022454	sf3b2	71	85.593	ENSMEUG00000000019	SF3B2	83	85.593	Notamacropus_eugenii
ENSORLG00015022454	sf3b2	82	73.418	ENSODEG00000017764	SF3B2	97	63.194	Octodon_degus
ENSORLG00015022454	sf3b2	97	77.075	ENSONIG00000013068	sf3b2	100	84.783	Oreochromis_niloticus
ENSORLG00015022454	sf3b2	82	71.880	ENSOANG00000012482	SF3B2	88	82.840	Ornithorhynchus_anatinus
ENSORLG00015022454	sf3b2	54	50.238	ENSOCUG00000024154	-	100	46.835	Oryctolagus_cuniculus
ENSORLG00015022454	sf3b2	82	77.795	ENSOCUG00000015722	-	97	70.128	Oryctolagus_cuniculus
ENSORLG00015022454	sf3b2	91	99.422	ENSORLG00000008235	sf3b2	99	99.422	Oryzias_latipes
ENSORLG00015022454	sf3b2	88	99.762	ENSORLG00020005357	sf3b2	100	99.762	Oryzias_latipes_hni
ENSORLG00015022454	sf3b2	88	94.398	ENSOMEG00000017480	sf3b2	100	95.113	Oryzias_melastigma
ENSORLG00015022454	sf3b2	76	85.714	ENSOGAG00000005799	SF3B2	97	64.977	Otolemur_garnettii
ENSORLG00015022454	sf3b2	82	77.638	ENSOARG00000002125	SF3B2	100	73.936	Ovis_aries
ENSORLG00015022454	sf3b2	82	78.323	ENSPPAG00000007359	SF3B2	97	67.568	Pan_paniscus
ENSORLG00015022454	sf3b2	82	78.481	ENSPPRG00000013334	SF3B2	97	67.117	Panthera_pardus
ENSORLG00015022454	sf3b2	82	78.481	ENSPTIG00000015022	SF3B2	97	67.117	Panthera_tigris_altaica
ENSORLG00015022454	sf3b2	82	78.323	ENSPTRG00000003912	SF3B2	97	67.684	Pan_troglodytes
ENSORLG00015022454	sf3b2	82	78.323	ENSPANG00000008593	SF3B2	97	68.851	Papio_anubis
ENSORLG00015022454	sf3b2	94	80.980	ENSPKIG00000016576	sf3b2	97	81.412	Paramormyrops_kingsleyae
ENSORLG00015022454	sf3b2	77	85.844	ENSPSIG00000003158	SF3B2	94	81.006	Pelodiscus_sinensis
ENSORLG00015022454	sf3b2	90	74.486	ENSPMGG00000000819	sf3b2	100	74.769	Periophthalmus_magnuspinnatus
ENSORLG00015022454	sf3b2	82	74.230	ENSPEMG00000015451	-	95	65.857	Peromyscus_maniculatus_bairdii
ENSORLG00015022454	sf3b2	82	78.165	ENSPEMG00000015437	Sf3b2	97	66.403	Peromyscus_maniculatus_bairdii
ENSORLG00015022454	sf3b2	76	86.081	ENSPCIG00000008381	SF3B2	99	68.714	Phascolarctos_cinereus
ENSORLG00015022454	sf3b2	90	95.455	ENSPFOG00000002552	sf3b2	100	81.975	Poecilia_formosa
ENSORLG00015022454	sf3b2	87	95.644	ENSPLAG00000001471	sf3b2	100	82.319	Poecilia_latipinna
ENSORLG00015022454	sf3b2	88	80.505	ENSPMEG00000013180	sf3b2	100	81.954	Poecilia_mexicana
ENSORLG00015022454	sf3b2	87	95.455	ENSPREG00000002665	sf3b2	100	83.142	Poecilia_reticulata
ENSORLG00015022454	sf3b2	52	68.251	ENSPPYG00000003034	-	94	59.846	Pongo_abelii
ENSORLG00015022454	sf3b2	82	78.639	ENSPCAG00000005129	SF3B2	97	67.455	Procavia_capensis
ENSORLG00015022454	sf3b2	82	78.165	ENSPCOG00000025375	SF3B2	97	67.568	Propithecus_coquereli
ENSORLG00015022454	sf3b2	91	81.560	ENSPNYG00000023594	sf3b2	100	86.752	Pundamilia_nyererei
ENSORLG00015022454	sf3b2	83	79.717	ENSPNAG00000001891	sf3b2	100	73.855	Pygocentrus_nattereri
ENSORLG00015022454	sf3b2	82	78.006	ENSRNOG00000020412	Sf3b2	97	66.290	Rattus_norvegicus
ENSORLG00015022454	sf3b2	82	78.165	ENSRBIG00000034065	SF3B2	97	68.529	Rhinopithecus_bieti
ENSORLG00015022454	sf3b2	82	78.165	ENSRROG00000034496	SF3B2	97	68.529	Rhinopithecus_roxellana
ENSORLG00015022454	sf3b2	82	78.323	ENSSBOG00000026337	SF3B2	97	67.540	Saimiri_boliviensis_boliviensis
ENSORLG00015022454	sf3b2	74	73.596	ENSSHAG00000018043	-	88	62.401	Sarcophilus_harrisii
ENSORLG00015022454	sf3b2	82	75.436	ENSSHAG00000010933	-	97	66.023	Sarcophilus_harrisii
ENSORLG00015022454	sf3b2	83	81.991	ENSSFOG00015021125	sf3b2	100	74.719	Scleropages_formosus
ENSORLG00015022454	sf3b2	89	81.327	ENSSMAG00000004079	sf3b2	100	82.209	Scophthalmus_maximus
ENSORLG00015022454	sf3b2	83	90.323	ENSSDUG00000008499	sf3b2	100	80.023	Seriola_dumerili
ENSORLG00015022454	sf3b2	89	94.455	ENSSLDG00000006838	sf3b2	100	84.122	Seriola_lalandi_dorsalis
ENSORLG00015022454	sf3b2	82	79.459	ENSSPUG00000009198	SF3B2	98	67.617	Sphenodon_punctatus
ENSORLG00015022454	sf3b2	95	75.000	ENSSPAG00000004406	sf3b2	100	81.991	Stegastes_partitus
ENSORLG00015022454	sf3b2	82	78.639	ENSSSCG00000012957	SF3B2	97	68.529	Sus_scrofa
ENSORLG00015022454	sf3b2	94	76.369	ENSTRUG00000007611	sf3b2	98	76.879	Takifugu_rubripes
ENSORLG00015022454	sf3b2	91	75.348	ENSTNIG00000007441	sf3b2	100	76.464	Tetraodon_nigroviridis
ENSORLG00015022454	sf3b2	66	88.732	ENSTBEG00000004258	SF3B2	73	88.732	Tupaia_belangeri
ENSORLG00015022454	sf3b2	82	78.165	ENSTTRG00000014339	SF3B2	97	68.415	Tursiops_truncatus
ENSORLG00015022454	sf3b2	79	77.997	ENSUAMG00000020754	SF3B2	96	64.286	Ursus_americanus
ENSORLG00015022454	sf3b2	82	78.481	ENSUMAG00000010994	SF3B2	97	67.117	Ursus_maritimus
ENSORLG00015022454	sf3b2	53	86.667	ENSVPAG00000008695	SF3B2	67	86.667	Vicugna_pacos
ENSORLG00015022454	sf3b2	82	78.268	ENSVVUG00000027029	SF3B2	97	67.117	Vulpes_vulpes
ENSORLG00015022454	sf3b2	82	74.363	ENSXETG00000008422	sf3b2	88	71.348	Xenopus_tropicalis
ENSORLG00015022454	sf3b2	91	86.170	ENSXCOG00000008943	sf3b2	95	86.478	Xiphophorus_couchianus
ENSORLG00015022454	sf3b2	87	95.644	ENSXMAG00000008467	sf3b2	100	81.735	Xiphophorus_maculatus