EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015022664 (Gene tree)
Gene ID: -
Gene Symbol: alyref
Alias: -
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 4549 bases
Position: chr8:15448522-15453070
Accession: ZDB-GENE-070928-29
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015021446	RRM_1	PF00076.22	1.3e-13	1	1
ENSORLP00015021436	RRM_1	PF00076.22	1.5e-13	1	1
ENSORLP00015021436	FYTT	PF07078.11	0.00071	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015030872	-	849	-	ENSORLP00015021436	282 (aa)	-	-
ENSORLT00015030880	-	1810	-	ENSORLP00015021446	268 (aa)	-	-

Gene Model

Click here to download ENSORLG00015022664's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015022664's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015022664	alyref	100	48.148	ENSORLG00015015143	-	100	47.670

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015022664	alyref	100	53.480	ENSAPOG00000000183	-	100	51.103	Acanthochromis_polyacanthus
ENSORLG00015022664	alyref	99	78.967	ENSACIG00000006351	alyref	98	83.150	Amphilophus_citrinellus
ENSORLG00015022664	alyref	100	47.333	ENSACIG00000020351	-	100	48.070	Amphilophus_citrinellus
ENSORLG00015022664	alyref	100	52.574	ENSAOCG00000019305	-	100	51.471	Amphiprion_ocellaris
ENSORLG00015022664	alyref	100	83.456	ENSAOCG00000014012	alyref	100	88.971	Amphiprion_ocellaris
ENSORLG00015022664	alyref	100	83.456	ENSAPEG00000014603	alyref	100	88.971	Amphiprion_percula
ENSORLG00015022664	alyref	100	54.412	ENSAPEG00000013527	-	100	51.471	Amphiprion_percula
ENSORLG00015022664	alyref	100	55.474	ENSATEG00000000382	-	100	53.846	Anabas_testudineus
ENSORLG00015022664	alyref	100	76.978	ENSATEG00000004307	alyref	100	87.410	Anabas_testudineus
ENSORLG00015022664	alyref	50	72.794	ENSAPLG00000014745	-	98	71.533	Anas_platyrhynchos
ENSORLG00015022664	alyref	100	87.546	ENSACLG00000008432	alyref	100	89.744	Astatotilapia_calliptera
ENSORLG00015022664	alyref	100	53.214	ENSACLG00000010184	-	100	50.000	Astatotilapia_calliptera
ENSORLG00015022664	alyref	100	71.429	ENSAMXG00000007359	alyref	100	73.929	Astyanax_mexicanus
ENSORLG00015022664	alyref	99	46.715	ENSCING00000013568	-	99	45.390	Ciona_intestinalis
ENSORLG00015022664	alyref	99	45.185	ENSCSAVG00000003324	-	99	43.123	Ciona_savignyi
ENSORLG00015022664	alyref	100	78.388	ENSCSEG00000017800	alyref	100	82.418	Cynoglossus_semilaevis
ENSORLG00015022664	alyref	100	89.591	ENSCVAG00000014869	alyref	100	88.104	Cyprinodon_variegatus
ENSORLG00015022664	alyref	100	49.630	ENSCVAG00000007789	-	100	47.636	Cyprinodon_variegatus
ENSORLG00015022664	alyref	100	78.571	ENSDARG00000077732	alyref	100	78.214	Danio_rerio
ENSORLG00015022664	alyref	97	46.097	FBgn0010774	Ref1	65	47.778	Drosophila_melanogaster
ENSORLG00015022664	alyref	99	49.434	ENSEBUG00000008253	alyref	96	49.813	Eptatretus_burgeri
ENSORLG00015022664	alyref	71	45.455	ENSEBUG00000006305	alyref	100	39.350	Eptatretus_burgeri
ENSORLG00015022664	alyref	100	68.817	ENSELUG00000008849	-	100	62.105	Esox_lucius
ENSORLG00015022664	alyref	100	74.632	ENSELUG00000017178	alyref	100	70.909	Esox_lucius
ENSORLG00015022664	alyref	58	77.500	ENSFALG00000011923	-	94	74.172	Ficedula_albicollis
ENSORLG00015022664	alyref	100	87.361	ENSFHEG00000019426	alyref	100	88.476	Fundulus_heteroclitus
ENSORLG00015022664	alyref	100	49.451	ENSFHEG00000004698	-	100	48.162	Fundulus_heteroclitus
ENSORLG00015022664	alyref	100	71.111	ENSGMOG00000009882	alyref	100	68.889	Gadus_morhua
ENSORLG00015022664	alyref	69	59.278	ENSGMOG00000013122	-	62	70.248	Gadus_morhua
ENSORLG00015022664	alyref	100	85.294	ENSGAFG00000006014	alyref	100	85.294	Gambusia_affinis
ENSORLG00015022664	alyref	100	46.570	ENSGAFG00000007573	-	100	46.324	Gambusia_affinis
ENSORLG00015022664	alyref	100	87.546	ENSHBUG00000020196	alyref	100	89.744	Haplochromis_burtoni
ENSORLG00015022664	alyref	100	53.405	ENSHBUG00000001454	-	100	50.865	Haplochromis_burtoni
ENSORLG00015022664	alyref	98	48.889	ENSHCOG00000012825	-	96	47.253	Hippocampus_comes
ENSORLG00015022664	alyref	100	73.455	ENSIPUG00000009469	alyref	100	72.826	Ictalurus_punctatus
ENSORLG00015022664	alyref	74	65.327	ENSSTOG00000016570	-	92	62.434	Ictidomys_tridecemlineatus
ENSORLG00015022664	alyref	100	52.399	ENSKMAG00000006462	-	100	51.292	Kryptolebias_marmoratus
ENSORLG00015022664	alyref	100	80.952	ENSKMAG00000008912	alyref	100	85.714	Kryptolebias_marmoratus
ENSORLG00015022664	alyref	100	46.599	ENSLBEG00000005387	-	100	47.569	Labrus_bergylta
ENSORLG00015022664	alyref	100	85.091	ENSLBEG00000023118	alyref	89	88.603	Labrus_bergylta
ENSORLG00015022664	alyref	99	48.162	ENSLBEG00000012930	-	100	45.255	Labrus_bergylta
ENSORLG00015022664	alyref	78	70.370	ENSLOCG00000013879	alyref	89	67.130	Lepisosteus_oculatus
ENSORLG00015022664	alyref	100	81.685	ENSMAMG00000003034	alyref	100	81.685	Mastacembelus_armatus
ENSORLG00015022664	alyref	100	50.362	ENSMAMG00000005464	-	100	50.735	Mastacembelus_armatus
ENSORLG00015022664	alyref	100	87.546	ENSMZEG00005008639	alyref	100	89.744	Maylandia_zebra
ENSORLG00015022664	alyref	100	52.857	ENSMZEG00005012096	-	100	50.171	Maylandia_zebra
ENSORLG00015022664	alyref	99	84.211	ENSMMOG00000012458	alyref	96	85.393	Mola_mola
ENSORLG00015022664	alyref	99	47.940	ENSMMOG00000007032	-	99	48.519	Mola_mola
ENSORLG00015022664	alyref	100	51.379	ENSMALG00000006054	-	100	49.104	Monopterus_albus
ENSORLG00015022664	alyref	98	53.405	ENSMLUG00000028605	-	98	52.347	Myotis_lucifugus
ENSORLG00015022664	alyref	98	54.035	ENSMLUG00000022467	-	98	50.896	Myotis_lucifugus
ENSORLG00015022664	alyref	100	60.727	ENSMLUG00000014372	-	100	57.971	Myotis_lucifugus
ENSORLG00015022664	alyref	98	58.456	ENSMLUG00000030671	-	99	51.625	Myotis_lucifugus
ENSORLG00015022664	alyref	100	59.567	ENSMLUG00000004098	-	100	56.877	Myotis_lucifugus
ENSORLG00015022664	alyref	100	59.928	ENSMLUG00000006521	-	100	56.835	Myotis_lucifugus
ENSORLG00015022664	alyref	98	55.390	ENSMLUG00000022178	-	98	54.647	Myotis_lucifugus
ENSORLG00015022664	alyref	98	54.212	ENSMLUG00000009247	-	98	49.446	Myotis_lucifugus
ENSORLG00015022664	alyref	100	70.370	ENSNGAG00000022014	-	100	63.433	Nannospalax_galili
ENSORLG00015022664	alyref	100	83.273	ENSNBRG00000001747	alyref	100	86.909	Neolamprologus_brichardi
ENSORLG00015022664	alyref	100	53.597	ENSNBRG00000017460	-	100	50.345	Neolamprologus_brichardi
ENSORLG00015022664	alyref	100	79.496	ENSONIG00000019434	alyref	100	84.173	Oreochromis_niloticus
ENSORLG00015022664	alyref	100	55.147	ENSONIG00000003296	-	100	54.412	Oreochromis_niloticus
ENSORLG00015022664	alyref	99	40.635	ENSORLG00000001620	-	58	47.642	Oryzias_latipes
ENSORLG00015022664	alyref	100	46.341	ENSORLG00020015673	-	100	46.953	Oryzias_latipes_hni
ENSORLG00015022664	alyref	100	99.296	ENSORLG00020011942	alyref	100	99.296	Oryzias_latipes_hni
ENSORLG00015022664	alyref	99	49.254	ENSOMEG00000007158	-	98	46.642	Oryzias_melastigma
ENSORLG00015022664	alyref	100	92.565	ENSOMEG00000019176	alyref	100	93.309	Oryzias_melastigma
ENSORLG00015022664	alyref	69	77.957	ENSPPAG00000036403	-	68	73.118	Pan_paniscus
ENSORLG00015022664	alyref	100	74.170	ENSPKIG00000007070	alyref	100	72.694	Paramormyrops_kingsleyae
ENSORLG00015022664	alyref	99	73.432	ENSPKIG00000006233	-	82	67.153	Paramormyrops_kingsleyae
ENSORLG00015022664	alyref	73	48.718	ENSPMGG00000012994	-	97	47.895	Periophthalmus_magnuspinnatus
ENSORLG00015022664	alyref	99	80.524	ENSPMGG00000016600	alyref	90	78.277	Periophthalmus_magnuspinnatus
ENSORLG00015022664	alyref	100	64.925	ENSPEMG00000016628	-	100	60.223	Peromyscus_maniculatus_bairdii
ENSORLG00015022664	alyref	100	83.150	ENSPFOG00000022825	alyref	99	83.516	Poecilia_formosa
ENSORLG00015022664	alyref	100	46.545	ENSPFOG00000017094	-	100	46.154	Poecilia_formosa
ENSORLG00015022664	alyref	100	83.824	ENSPLAG00000006948	alyref	100	83.824	Poecilia_latipinna
ENSORLG00015022664	alyref	100	46.545	ENSPLAG00000014380	-	100	46.154	Poecilia_latipinna
ENSORLG00015022664	alyref	100	46.545	ENSPMEG00000023039	-	100	46.154	Poecilia_mexicana
ENSORLG00015022664	alyref	100	83.150	ENSPMEG00000003547	alyref	100	83.516	Poecilia_mexicana
ENSORLG00015022664	alyref	100	49.265	ENSPREG00000003649	-	100	47.778	Poecilia_reticulata
ENSORLG00015022664	alyref	100	84.191	ENSPREG00000015795	alyref	100	84.191	Poecilia_reticulata
ENSORLG00015022664	alyref	100	87.546	ENSPNYG00000017498	alyref	100	89.744	Pundamilia_nyererei
ENSORLG00015022664	alyref	99	50.725	ENSPNYG00000002879	-	98	51.103	Pundamilia_nyererei
ENSORLG00015022664	alyref	100	76.087	ENSPNAG00000002531	alyref	100	75.000	Pygocentrus_nattereri
ENSORLG00015022664	alyref	73	76.531	ENSSBOG00000030924	-	87	71.282	Saimiri_boliviensis_boliviensis
ENSORLG00015022664	alyref	99	56.679	ENSSHAG00000000609	-	99	54.244	Sarcophilus_harrisii
ENSORLG00015022664	alyref	99	55.597	ENSSHAG00000012866	-	99	52.206	Sarcophilus_harrisii
ENSORLG00015022664	alyref	78	79.426	ENSSFOG00015003923	alyref	73	73.333	Scleropages_formosus
ENSORLG00015022664	alyref	69	74.603	ENSSFOG00015003678	alyref	83	71.658	Scleropages_formosus
ENSORLG00015022664	alyref	100	81.752	ENSSMAG00000009283	alyref	100	82.117	Scophthalmus_maximus
ENSORLG00015022664	alyref	100	50.890	ENSSMAG00000011169	-	100	53.266	Scophthalmus_maximus
ENSORLG00015022664	alyref	100	84.191	ENSSDUG00000016158	alyref	100	89.706	Seriola_dumerili
ENSORLG00015022664	alyref	100	82.784	ENSSLDG00000017803	alyref	100	86.081	Seriola_lalandi_dorsalis
ENSORLG00015022664	alyref	99	52.381	ENSSPAG00000017028	-	96	51.685	Stegastes_partitus
ENSORLG00015022664	alyref	100	51.943	ENSTRUG00000003051	-	100	51.079	Takifugu_rubripes
ENSORLG00015022664	alyref	100	77.372	ENSTNIG00000011595	alyref	100	73.358	Tetraodon_nigroviridis
ENSORLG00015022664	alyref	100	51.079	ENSTNIG00000014136	-	100	47.970	Tetraodon_nigroviridis
ENSORLG00015022664	alyref	71	76.316	ENSVVUG00000000272	-	82	73.545	Vulpes_vulpes
ENSORLG00015022664	alyref	99	84.387	ENSXCOG00000018047	alyref	99	83.456	Xiphophorus_couchianus
ENSORLG00015022664	alyref	99	84.387	ENSXMAG00000012218	alyref	99	83.456	Xiphophorus_maculatus
ENSORLG00015022664	alyref	100	46.886	ENSXMAG00000018086	-	100	46.520	Xiphophorus_maculatus