EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015022712 (Gene tree)
Gene ID: -
Gene Symbol: SRRM3
Alias: -
Full Name: serine/arginine repetitive matrix 3
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 52572 bases
Position: chr14:21573885-21626456
Accession: 101172013
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015021491	cwf21	PF08312.12	3.6e-16	1	1
ENSORLP00015021491	SRRM_C	PF15230.6	2.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015030937	SRRM3-201	3382	XM_011483759	ENSORLP00015021491	627 (aa)	XP_011482061	-

Gene Model

Click here to download ENSORLG00015022712's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015022712's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015022712	SRRM3	89	79.505	ENSAPOG00000000288	SRRM3	88	79.649	Acanthochromis_polyacanthus
ENSORLG00015022712	SRRM3	89	74.735	ENSACLG00000005269	SRRM3	88	74.912	Astatotilapia_calliptera
ENSORLG00015022712	SRRM3	89	50.940	ENSAMXG00000016051	-	100	52.252	Astyanax_mexicanus
ENSORLG00015022712	SRRM3	53	50.276	ENSCPBG00000027784	SRRM3	53	44.505	Chrysemys_picta_bellii
ENSORLG00015022712	SRRM3	89	69.580	ENSCSEG00000010978	-	80	69.618	Cynoglossus_semilaevis
ENSORLG00015022712	SRRM3	89	77.289	ENSGAFG00000014777	SRRM3	88	77.448	Gambusia_affinis
ENSORLG00015022712	SRRM3	89	75.309	ENSHBUG00000005061	SRRM3	88	75.439	Haplochromis_burtoni
ENSORLG00015022712	SRRM3	89	51.379	ENSIPUG00000012467	srrm3	87	51.973	Ictalurus_punctatus
ENSORLG00015022712	SRRM3	55	47.234	ENSSTOG00000014181	SRRM3	84	54.264	Ictidomys_tridecemlineatus
ENSORLG00015022712	SRRM3	90	76.132	ENSKMAG00000013495	SRRM3	88	75.916	Kryptolebias_marmoratus
ENSORLG00015022712	SRRM3	53	57.184	ENSLOCG00000002879	SRRM3	98	56.322	Lepisosteus_oculatus
ENSORLG00015022712	SRRM3	91	74.010	ENSMALG00000000844	-	90	73.730	Monopterus_albus
ENSORLG00015022712	SRRM3	54	64.706	ENSONIG00000012732	-	78	75.833	Oreochromis_niloticus
ENSORLG00015022712	SRRM3	100	98.884	ENSORLG00000026242	-	100	98.884	Oryzias_latipes
ENSORLG00015022712	SRRM3	100	98.565	ENSORLG00020016592	-	100	98.565	Oryzias_latipes_hni
ENSORLG00015022712	SRRM3	100	90.665	ENSOMEG00000010768	-	100	92.405	Oryzias_melastigma
ENSORLG00015022712	SRRM3	89	50.759	ENSPKIG00000017233	SRRM3	92	50.334	Paramormyrops_kingsleyae
ENSORLG00015022712	SRRM3	89	57.939	ENSPFOG00000009007	SRRM3	65	60.000	Poecilia_formosa
ENSORLG00015022712	SRRM3	89	75.795	ENSPMEG00000011981	-	88	75.439	Poecilia_mexicana
ENSORLG00015022712	SRRM3	89	77.915	ENSPREG00000008138	-	88	78.070	Poecilia_reticulata
ENSORLG00015022712	SRRM3	89	53.912	ENSPNAG00000009621	SRRM3	87	54.992	Pygocentrus_nattereri
ENSORLG00015022712	SRRM3	61	53.477	ENSSFOG00015001696	SRRM3	89	56.383	Scleropages_formosus
ENSORLG00015022712	SRRM3	89	75.880	ENSSMAG00000000476	SRRM3	100	75.234	Scophthalmus_maximus
ENSORLG00015022712	SRRM3	89	76.684	ENSSLDG00000020070	SRRM3	88	76.329	Seriola_lalandi_dorsalis
ENSORLG00015022712	SRRM3	89	76.408	ENSXMAG00000005663	-	88	76.573	Xiphophorus_maculatus