EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015023012 (Gene tree)
Gene ID: -
Gene Symbol: pus1
Alias: -
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 2329 bases
Position: chr12:16074576-16076904
Accession: ZDB-GENE-041212-26
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015000306	PseudoU_synth_1	PF01416.20	6.9e-15	1	1
ENSORLP00015000304	PseudoU_synth_1	PF01416.20	7.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015014558	-	1810	-	ENSORLP00015000306	416 (aa)	-	-
ENSORLT00015014556	-	1973	-	ENSORLP00015000304	390 (aa)	-	-

Gene Model

Click here to download ENSORLG00015023012's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015023012's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015023012	pus1	90	70.571	ENSG00000177192	PUS1	85	73.252	Homo_sapiens
ENSORLG00015023012	pus1	100	83.418	ENSAPOG00000007254	pus1	100	80.569	Acanthochromis_polyacanthus
ENSORLG00015023012	pus1	94	67.486	ENSAMEG00000013715	PUS1	87	67.486	Ailuropoda_melanoleuca
ENSORLG00015023012	pus1	100	81.122	ENSACIG00000009169	pus1	97	79.506	Amphilophus_citrinellus
ENSORLG00015023012	pus1	100	83.673	ENSAOCG00000022207	pus1	100	80.806	Amphiprion_ocellaris
ENSORLG00015023012	pus1	100	83.418	ENSAPEG00000006039	pus1	100	83.418	Amphiprion_percula
ENSORLG00015023012	pus1	99	83.077	ENSATEG00000020688	pus1	99	83.077	Anabas_testudineus
ENSORLG00015023012	pus1	87	71.765	ENSACAG00000007367	PUS1	91	71.765	Anolis_carolinensis
ENSORLG00015023012	pus1	83	70.370	ENSANAG00000036192	PUS1	99	70.370	Aotus_nancymaae
ENSORLG00015023012	pus1	99	81.026	ENSACLG00000020868	pus1	99	81.026	Astatotilapia_calliptera
ENSORLG00015023012	pus1	97	73.740	ENSAMXG00000008710	pus1	94	69.157	Astyanax_mexicanus
ENSORLG00015023012	pus1	89	70.231	ENSBTAG00000012990	PUS1	86	70.231	Bos_taurus
ENSORLG00015023012	pus1	83	39.826	WBGene00004248	pus-1	81	39.826	Caenorhabditis_elegans
ENSORLG00015023012	pus1	65	70.866	ENSCJAG00000003720	PUS1	70	70.930	Callithrix_jacchus
ENSORLG00015023012	pus1	91	68.927	ENSCAFG00000006429	PUS1	83	72.072	Canis_familiaris
ENSORLG00015023012	pus1	85	72.072	ENSCAFG00020010737	PUS1	77	72.072	Canis_lupus_dingo
ENSORLG00015023012	pus1	89	70.520	ENSCHIG00000000487	PUS1	86	70.520	Capra_hircus
ENSORLG00015023012	pus1	90	70.857	ENSTSYG00000032605	PUS1	94	71.429	Carlito_syrichta
ENSORLG00015023012	pus1	77	73.244	ENSCAPG00000006421	PUS1	94	73.267	Cavia_aperea
ENSORLG00015023012	pus1	88	70.468	ENSCPOG00000001027	PUS1	92	64.377	Cavia_porcellus
ENSORLG00015023012	pus1	83	72.615	ENSCCAG00000015879	PUS1	90	69.632	Cebus_capucinus
ENSORLG00015023012	pus1	86	71.810	ENSCATG00000032870	PUS1	83	73.115	Cercocebus_atys
ENSORLG00015023012	pus1	84	71.951	ENSCLAG00000011689	PUS1	84	67.978	Chinchilla_lanigera
ENSORLG00015023012	pus1	86	72.107	ENSCSAG00000001879	PUS1	79	72.107	Chlorocebus_sabaeus
ENSORLG00015023012	pus1	81	71.429	ENSCPBG00000024715	PUS1	89	71.429	Chrysemys_picta_bellii
ENSORLG00015023012	pus1	88	43.732	ENSCING00000009426	-	91	43.732	Ciona_intestinalis
ENSORLG00015023012	pus1	83	43.210	ENSCSAVG00000003751	-	67	43.210	Ciona_savignyi
ENSORLG00015023012	pus1	90	62.000	ENSCANG00000035561	PUS1	89	63.526	Colobus_angolensis_palliatus
ENSORLG00015023012	pus1	87	73.156	ENSCGRG00001019592	Pus1	80	73.156	Cricetulus_griseus_chok1gshd
ENSORLG00015023012	pus1	87	73.156	ENSCGRG00000004048	Pus1	86	73.156	Cricetulus_griseus_crigri
ENSORLG00015023012	pus1	99	77.692	ENSCSEG00000003629	pus1	100	75.355	Cynoglossus_semilaevis
ENSORLG00015023012	pus1	99	83.505	ENSCVAG00000001265	pus1	100	81.190	Cyprinodon_variegatus
ENSORLG00015023012	pus1	98	69.974	ENSDARG00000045562	pus1	96	77.407	Danio_rerio
ENSORLG00015023012	pus1	84	72.393	ENSDNOG00000045576	PUS1	94	71.895	Dasypus_novemcinctus
ENSORLG00015023012	pus1	83	70.859	ENSDORG00000011455	Pus1	99	70.859	Dipodomys_ordii
ENSORLG00015023012	pus1	82	48.910	FBgn0038811	PUS1	77	48.910	Drosophila_melanogaster
ENSORLG00015023012	pus1	86	71.045	ENSETEG00000019160	PUS1	83	70.796	Echinops_telfairi
ENSORLG00015023012	pus1	88	43.597	ENSEBUG00000000368	-	69	42.895	Eptatretus_burgeri
ENSORLG00015023012	pus1	98	65.796	ENSEASG00005016535	PUS1	86	65.796	Equus_asinus_asinus
ENSORLG00015023012	pus1	91	68.994	ENSECAG00000006965	PUS1	89	68.232	Equus_caballus
ENSORLG00015023012	pus1	96	74.868	ENSELUG00000010424	pus1	96	74.868	Esox_lucius
ENSORLG00015023012	pus1	54	30.802	ENSFCAG00000007617	PUSL1	77	30.802	Felis_catus
ENSORLG00015023012	pus1	85	73.030	ENSFCAG00000010780	PUS1	84	67.582	Felis_catus
ENSORLG00015023012	pus1	89	71.714	ENSFALG00000008273	PUS1	82	71.714	Ficedula_albicollis
ENSORLG00015023012	pus1	94	67.935	ENSFDAG00000012518	PUS1	88	67.935	Fukomys_damarensis
ENSORLG00015023012	pus1	100	83.590	ENSFHEG00000010504	pus1	100	81.190	Fundulus_heteroclitus
ENSORLG00015023012	pus1	96	74.400	ENSGMOG00000008143	pus1	99	73.282	Gadus_morhua
ENSORLG00015023012	pus1	99	67.784	ENSGALG00000002354	PUS1	91	67.784	Gallus_gallus
ENSORLG00015023012	pus1	64	30.389	ENSGALG00000000962	PUS3	54	30.389	Gallus_gallus
ENSORLG00015023012	pus1	99	83.505	ENSGAFG00000006578	pus1	100	80.952	Gambusia_affinis
ENSORLG00015023012	pus1	100	79.337	ENSGACG00000017566	pus1	100	79.337	Gasterosteus_aculeatus
ENSORLG00015023012	pus1	81	70.159	ENSGAGG00000016730	-	90	70.159	Gopherus_agassizii
ENSORLG00015023012	pus1	90	70.857	ENSGGOG00000009178	PUS1	87	71.166	Gorilla_gorilla
ENSORLG00015023012	pus1	99	81.538	ENSHBUG00000001316	pus1	99	81.538	Haplochromis_burtoni
ENSORLG00015023012	pus1	77	30.120	ENSHGLG00000015753	-	81	30.120	Heterocephalus_glaber_female
ENSORLG00015023012	pus1	90	67.429	ENSHGLG00000016086	PUS1	89	67.429	Heterocephalus_glaber_female
ENSORLG00015023012	pus1	90	67.143	ENSHGLG00100019362	PUS1	89	67.143	Heterocephalus_glaber_male
ENSORLG00015023012	pus1	99	77.062	ENSHCOG00000014288	pus1	96	74.524	Hippocampus_comes
ENSORLG00015023012	pus1	100	73.846	ENSIPUG00000010387	pus1	100	69.302	Ictalurus_punctatus
ENSORLG00015023012	pus1	89	71.387	ENSSTOG00000011245	PUS1	81	71.387	Ictidomys_tridecemlineatus
ENSORLG00015023012	pus1	87	72.781	ENSJJAG00000000088	Pus1	80	72.781	Jaculus_jaculus
ENSORLG00015023012	pus1	98	78.961	ENSKMAG00000012702	pus1	100	74.822	Kryptolebias_marmoratus
ENSORLG00015023012	pus1	99	77.041	ENSLBEG00000002845	pus1	98	75.931	Labrus_bergylta
ENSORLG00015023012	pus1	83	57.764	ENSLACG00000016044	-	97	57.764	Latimeria_chalumnae
ENSORLG00015023012	pus1	91	69.081	ENSLACG00000018598	PUS1	93	67.560	Latimeria_chalumnae
ENSORLG00015023012	pus1	96	69.430	ENSLOCG00000006127	pus1	96	69.430	Lepisosteus_oculatus
ENSORLG00015023012	pus1	91	68.555	ENSLAFG00000028731	PUS1	95	68.555	Loxodonta_africana
ENSORLG00015023012	pus1	83	73.538	ENSMFAG00000041194	PUS1	83	73.443	Macaca_fascicularis
ENSORLG00015023012	pus1	86	72.107	ENSMMUG00000031463	PUS1	87	73.443	Macaca_mulatta
ENSORLG00015023012	pus1	86	72.107	ENSMNEG00000002814	PUS1	83	73.443	Macaca_nemestrina
ENSORLG00015023012	pus1	78	73.597	ENSMLEG00000043560	PUS1	93	73.597	Mandrillus_leucophaeus
ENSORLG00015023012	pus1	100	82.908	ENSMAMG00000007371	pus1	100	80.095	Mastacembelus_armatus
ENSORLG00015023012	pus1	99	81.282	ENSMZEG00005017746	pus1	100	78.673	Maylandia_zebra
ENSORLG00015023012	pus1	83	73.375	ENSMGAG00000001958	PUS1	98	73.375	Meleagris_gallopavo
ENSORLG00015023012	pus1	64	31.716	ENSMGAG00000000851	PUS3	63	32.075	Meleagris_gallopavo
ENSORLG00015023012	pus1	87	73.451	ENSMAUG00000001482	Pus1	80	73.451	Mesocricetus_auratus
ENSORLG00015023012	pus1	88	71.221	ENSMICG00000030980	PUS1	90	68.665	Microcebus_murinus
ENSORLG00015023012	pus1	87	73.156	ENSMOCG00000022311	Pus1	80	73.156	Microtus_ochrogaster
ENSORLG00015023012	pus1	97	79.310	ENSMMOG00000021022	pus1	97	79.310	Mola_mola
ENSORLG00015023012	pus1	88	68.222	ENSMODG00000015551	PUS1	82	66.120	Monodelphis_domestica
ENSORLG00015023012	pus1	99	80.051	ENSMALG00000013202	pus1	99	77.910	Monopterus_albus
ENSORLG00015023012	pus1	91	70.822	MGP_CAROLIEiJ_G0027551	Pus1	88	71.965	Mus_caroli
ENSORLG00015023012	pus1	91	70.822	ENSMUSG00000029507	Pus1	88	71.965	Mus_musculus
ENSORLG00015023012	pus1	89	71.965	MGP_PahariEiJ_G0024133	Pus1	88	71.965	Mus_pahari
ENSORLG00015023012	pus1	91	70.822	MGP_SPRETEiJ_G0028549	Pus1	88	71.965	Mus_spretus
ENSORLG00015023012	pus1	55	30.041	MGP_SPRETEiJ_G0027906	Pusl1	81	30.041	Mus_spretus
ENSORLG00015023012	pus1	84	73.252	ENSMPUG00000002314	PUS1	83	73.252	Mustela_putorius_furo
ENSORLG00015023012	pus1	92	66.944	ENSMLUG00000015790	PUS1	98	66.944	Myotis_lucifugus
ENSORLG00015023012	pus1	84	75.076	ENSNGAG00000012976	Pus1	78	75.076	Nannospalax_galili
ENSORLG00015023012	pus1	99	81.282	ENSNBRG00000020502	pus1	99	81.867	Neolamprologus_brichardi
ENSORLG00015023012	pus1	90	68.571	ENSNLEG00000008505	PUS1	99	70.794	Nomascus_leucogenys
ENSORLG00015023012	pus1	89	62.178	ENSMEUG00000002825	PUS1	93	62.178	Notamacropus_eugenii
ENSORLG00015023012	pus1	84	63.914	ENSOPRG00000002701	-	91	61.383	Ochotona_princeps
ENSORLG00015023012	pus1	89	70.809	ENSODEG00000008248	PUS1	91	70.809	Octodon_degus
ENSORLG00015023012	pus1	99	80.253	ENSONIG00000003803	pus1	99	80.253	Oreochromis_niloticus
ENSORLG00015023012	pus1	87	71.006	ENSOANG00000010619	PUS1	77	71.006	Ornithorhynchus_anatinus
ENSORLG00015023012	pus1	93	67.867	ENSOCUG00000007310	PUS1	79	67.671	Oryctolagus_cuniculus
ENSORLG00015023012	pus1	100	98.558	ENSORLG00000010787	pus1	100	98.558	Oryzias_latipes
ENSORLG00015023012	pus1	100	99.279	ENSORLG00020011483	pus1	100	99.279	Oryzias_latipes_hni
ENSORLG00015023012	pus1	97	92.876	ENSOMEG00000022655	pus1	96	91.241	Oryzias_melastigma
ENSORLG00015023012	pus1	94	67.847	ENSOGAG00000008720	PUS1	95	68.392	Otolemur_garnettii
ENSORLG00015023012	pus1	89	70.231	ENSOARG00000013316	PUS1	79	70.231	Ovis_aries
ENSORLG00015023012	pus1	90	70.857	ENSPPAG00000040971	PUS1	87	71.166	Pan_paniscus
ENSORLG00015023012	pus1	85	73.030	ENSPPRG00000015456	PUS1	84	73.030	Panthera_pardus
ENSORLG00015023012	pus1	84	73.006	ENSPTIG00000004201	PUS1	86	73.030	Panthera_tigris_altaica
ENSORLG00015023012	pus1	90	70.571	ENSPTRG00000005643	PUS1	87	70.859	Pan_troglodytes
ENSORLG00015023012	pus1	86	72.024	ENSPANG00000000376	PUS1	83	73.355	Papio_anubis
ENSORLG00015023012	pus1	91	69.359	ENSPKIG00000019369	pus1	87	65.641	Paramormyrops_kingsleyae
ENSORLG00015023012	pus1	92	67.680	ENSPSIG00000016432	PUS1	94	63.210	Pelodiscus_sinensis
ENSORLG00015023012	pus1	97	75.789	ENSPMGG00000004522	pus1	97	76.330	Periophthalmus_magnuspinnatus
ENSORLG00015023012	pus1	87	73.451	ENSPEMG00000013448	Pus1	80	73.451	Peromyscus_maniculatus_bairdii
ENSORLG00015023012	pus1	84	59.517	ENSPMAG00000004636	pus1	99	59.517	Petromyzon_marinus
ENSORLG00015023012	pus1	77	60.797	ENSPCIG00000022609	-	73	59.935	Phascolarctos_cinereus
ENSORLG00015023012	pus1	99	82.732	ENSPFOG00000019669	pus1	100	80.000	Poecilia_formosa
ENSORLG00015023012	pus1	99	82.474	ENSPLAG00000002692	-	100	79.762	Poecilia_latipinna
ENSORLG00015023012	pus1	99	82.474	ENSPLAG00000007185	pus1	100	79.762	Poecilia_latipinna
ENSORLG00015023012	pus1	99	82.474	ENSPMEG00000006038	pus1	98	82.071	Poecilia_mexicana
ENSORLG00015023012	pus1	99	82.474	ENSPMEG00000011115	PUS1	100	79.762	Poecilia_mexicana
ENSORLG00015023012	pus1	99	81.959	ENSPREG00000007231	pus1	99	83.565	Poecilia_reticulata
ENSORLG00015023012	pus1	90	70.000	ENSPPYG00000005132	PUS1	82	70.000	Pongo_abelii
ENSORLG00015023012	pus1	68	66.165	ENSPCAG00000009110	-	65	66.165	Procavia_capensis
ENSORLG00015023012	pus1	88	62.209	ENSPCOG00000015595	PUS1	90	61.035	Propithecus_coquereli
ENSORLG00015023012	pus1	99	81.026	ENSPNYG00000013571	pus1	100	78.673	Pundamilia_nyererei
ENSORLG00015023012	pus1	97	74.536	ENSPNAG00000003938	pus1	88	74.536	Pygocentrus_nattereri
ENSORLG00015023012	pus1	91	70.538	ENSRNOG00000037500	Pus1	83	70.538	Rattus_norvegicus
ENSORLG00015023012	pus1	90	70.571	ENSRBIG00000043177	PUS1	90	70.859	Rhinopithecus_bieti
ENSORLG00015023012	pus1	90	70.571	ENSRROG00000039744	PUS1	88	70.199	Rhinopithecus_roxellana
ENSORLG00015023012	pus1	83	46.667	YPL212C	-	69	39.267	Saccharomyces_cerevisiae
ENSORLG00015023012	pus1	90	70.000	ENSSBOG00000023593	PUS1	92	69.969	Saimiri_boliviensis_boliviensis
ENSORLG00015023012	pus1	94	66.757	ENSSHAG00000013193	PUS1	89	66.757	Sarcophilus_harrisii
ENSORLG00015023012	pus1	92	73.407	ENSSFOG00015003463	pus1	84	72.312	Scleropages_formosus
ENSORLG00015023012	pus1	99	80.513	ENSSMAG00000019075	pus1	100	77.014	Scophthalmus_maximus
ENSORLG00015023012	pus1	99	83.333	ENSSDUG00000007102	pus1	100	80.095	Seriola_dumerili
ENSORLG00015023012	pus1	99	83.077	ENSSLDG00000022850	pus1	100	79.858	Seriola_lalandi_dorsalis
ENSORLG00015023012	pus1	78	62.046	ENSSARG00000008367	PUS1	98	62.046	Sorex_araneus
ENSORLG00015023012	pus1	87	70.760	ENSSPUG00000010009	PUS1	87	69.405	Sphenodon_punctatus
ENSORLG00015023012	pus1	100	82.653	ENSSPAG00000006272	pus1	100	82.653	Stegastes_partitus
ENSORLG00015023012	pus1	98	66.150	ENSSSCG00000009741	PUS1	93	66.150	Sus_scrofa
ENSORLG00015023012	pus1	85	74.545	ENSTGUG00000008068	PUS1	99	75.229	Taeniopygia_guttata
ENSORLG00015023012	pus1	94	79.235	ENSTRUG00000002198	pus1	91	81.127	Takifugu_rubripes
ENSORLG00015023012	pus1	96	76.267	ENSTNIG00000003942	pus1	94	76.800	Tetraodon_nigroviridis
ENSORLG00015023012	pus1	99	63.706	ENSTTRG00000000632	PUS1	95	62.469	Tursiops_truncatus
ENSORLG00015023012	pus1	91	68.908	ENSUAMG00000017197	PUS1	90	68.908	Ursus_americanus
ENSORLG00015023012	pus1	88	70.145	ENSUMAG00000002831	PUS1	94	73.248	Ursus_maritimus
ENSORLG00015023012	pus1	78	30.084	ENSVPAG00000001495	PUS3	67	30.084	Vicugna_pacos
ENSORLG00015023012	pus1	85	72.424	ENSVVUG00000004199	PUS1	75	72.424	Vulpes_vulpes
ENSORLG00015023012	pus1	89	67.919	ENSXETG00000002030	pus1	86	67.919	Xenopus_tropicalis
ENSORLG00015023012	pus1	82	49.688	ENSXETG00000033640	-	99	49.688	Xenopus_tropicalis
ENSORLG00015023012	pus1	99	84.536	ENSXCOG00000004722	pus1	98	85.185	Xiphophorus_couchianus
ENSORLG00015023012	pus1	99	84.278	ENSXMAG00000000988	pus1	100	81.667	Xiphophorus_maculatus