EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015023030 (Gene tree)
Gene ID: -
Gene Symbol: ddx28
Alias: -
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 28
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 3289 bases
Position: chr3:25969033-25972321
Accession: ZDB-GENE-061013-64
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015000293	DEAD	PF00270.29	2.4e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015014592	-	1650	-	ENSORLP00015000293	549 (aa)	-	-

Gene Model

Click here to download ENSORLG00015023030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015023030's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015023030	ddx28	67	30.366	ENSORLG00015004885	ddx55	75	33.333
ENSORLG00015023030	ddx28	66	33.780	ENSORLG00015004882	DDX41	57	33.780
ENSORLG00015023030	ddx28	70	31.266	ENSORLG00015017712	ddx47	73	31.266

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015023030	ddx28	93	48.256	ENSG00000182810	DDX28	94	48.256	Homo_sapiens
ENSORLG00015023030	ddx28	99	76.259	ENSAPOG00000000991	ddx28	97	76.259	Acanthochromis_polyacanthus
ENSORLG00015023030	ddx28	92	48.544	ENSAMEG00000019426	DDX28	94	48.544	Ailuropoda_melanoleuca
ENSORLG00015023030	ddx28	99	73.788	ENSACIG00000021615	ddx28	99	73.788	Amphilophus_citrinellus
ENSORLG00015023030	ddx28	99	75.899	ENSAOCG00000004610	ddx28	97	75.899	Amphiprion_ocellaris
ENSORLG00015023030	ddx28	99	75.719	ENSAPEG00000002143	ddx28	97	75.719	Amphiprion_percula
ENSORLG00015023030	ddx28	99	75.224	ENSATEG00000018691	ddx28	99	75.224	Anabas_testudineus
ENSORLG00015023030	ddx28	92	46.351	ENSACAG00000009755	DDX28	93	46.351	Anolis_carolinensis
ENSORLG00015023030	ddx28	98	71.403	ENSACLG00000012984	ddx28	97	71.403	Astatotilapia_calliptera
ENSORLG00015023030	ddx28	93	62.998	ENSAMXG00000005878	ddx28	92	62.998	Astyanax_mexicanus
ENSORLG00015023030	ddx28	93	48.846	ENSBTAG00000004290	DDX28	93	48.940	Bos_taurus
ENSORLG00015023030	ddx28	92	48.047	ENSCAFG00000020327	DDX28	95	48.047	Canis_familiaris
ENSORLG00015023030	ddx28	92	48.047	ENSCAFG00020019785	DDX28	95	48.047	Canis_lupus_dingo
ENSORLG00015023030	ddx28	92	49.130	ENSCHIG00000009658	DDX28	93	49.130	Capra_hircus
ENSORLG00015023030	ddx28	98	47.166	ENSCPOG00000013746	DDX28	98	47.166	Cavia_porcellus
ENSORLG00015023030	ddx28	93	47.868	ENSCSAG00000018472	DDX28	93	47.868	Chlorocebus_sabaeus
ENSORLG00015023030	ddx28	85	49.041	ENSCPBG00000012105	DDX28	81	51.852	Chrysemys_picta_bellii
ENSORLG00015023030	ddx28	66	36.066	ENSCSAVG00000006341	-	94	36.066	Ciona_savignyi
ENSORLG00015023030	ddx28	89	47.791	ENSCGRG00001024412	Ddx28	94	47.791	Cricetulus_griseus_chok1gshd
ENSORLG00015023030	ddx28	95	68.190	ENSCSEG00000011651	ddx28	92	68.190	Cynoglossus_semilaevis
ENSORLG00015023030	ddx28	99	74.495	ENSCVAG00000004044	ddx28	97	74.495	Cyprinodon_variegatus
ENSORLG00015023030	ddx28	91	63.043	ENSDARG00000060411	ddx28	90	63.043	Danio_rerio
ENSORLG00015023030	ddx28	66	54.247	ENSDNOG00000033593	DDX28	98	54.247	Dasypus_novemcinctus
ENSORLG00015023030	ddx28	93	45.962	ENSDORG00000028868	Ddx28	94	46.833	Dipodomys_ordii
ENSORLG00015023030	ddx28	82	37.637	FBgn0086130	Dbp21E2	82	37.637	Drosophila_melanogaster
ENSORLG00015023030	ddx28	94	48.282	ENSETEG00000001062	-	95	48.282	Echinops_telfairi
ENSORLG00015023030	ddx28	75	41.489	ENSEBUG00000004791	ddx28	81	40.580	Eptatretus_burgeri
ENSORLG00015023030	ddx28	93	47.683	ENSEASG00005020387	DDX28	94	47.776	Equus_asinus_asinus
ENSORLG00015023030	ddx28	92	48.155	ENSECAG00000006451	DDX28	94	48.155	Equus_caballus
ENSORLG00015023030	ddx28	73	42.439	ENSEEUG00000005017	DDX28	94	42.439	Erinaceus_europaeus
ENSORLG00015023030	ddx28	93	66.794	ENSELUG00000005302	ddx28	98	67.375	Esox_lucius
ENSORLG00015023030	ddx28	92	48.638	ENSFCAG00000012858	DDX28	94	48.638	Felis_catus
ENSORLG00015023030	ddx28	99	72.022	ENSFHEG00000012573	ddx28	99	72.022	Fundulus_heteroclitus
ENSORLG00015023030	ddx28	94	70.115	ENSGMOG00000017045	ddx28	98	70.115	Gadus_morhua
ENSORLG00015023030	ddx28	92	44.981	ENSGALG00000048700	DDX28	90	44.592	Gallus_gallus
ENSORLG00015023030	ddx28	94	76.686	ENSGAFG00000009249	ddx28	92	76.686	Gambusia_affinis
ENSORLG00015023030	ddx28	93	75.097	ENSGACG00000016367	ddx28	95	75.097	Gasterosteus_aculeatus
ENSORLG00015023030	ddx28	79	48.055	ENSGAGG00000004565	DDX28	95	48.055	Gopherus_agassizii
ENSORLG00015023030	ddx28	93	48.450	ENSGGOG00000001220	DDX28	94	48.450	Gorilla_gorilla
ENSORLG00015023030	ddx28	98	74.681	ENSHBUG00000001016	ddx28	97	74.681	Haplochromis_burtoni
ENSORLG00015023030	ddx28	99	68.124	ENSHCOG00000017590	ddx28	98	68.124	Hippocampus_comes
ENSORLG00015023030	ddx28	92	63.065	ENSIPUG00000017350	Ddx28	89	63.065	Ictalurus_punctatus
ENSORLG00015023030	ddx28	95	48.037	ENSSTOG00000002064	DDX28	96	48.037	Ictidomys_tridecemlineatus
ENSORLG00015023030	ddx28	93	46.318	ENSJJAG00000012460	-	94	46.318	Jaculus_jaculus
ENSORLG00015023030	ddx28	96	77.127	ENSKMAG00000018183	ddx28	93	77.127	Kryptolebias_marmoratus
ENSORLG00015023030	ddx28	99	74.368	ENSLBEG00000006072	ddx28	98	74.368	Labrus_bergylta
ENSORLG00015023030	ddx28	93	55.534	ENSLACG00000005578	DDX28	88	55.534	Latimeria_chalumnae
ENSORLG00015023030	ddx28	94	59.387	ENSLOCG00000017604	ddx28	92	59.387	Lepisosteus_oculatus
ENSORLG00015023030	ddx28	92	49.222	ENSLAFG00000031239	DDX28	99	47.706	Loxodonta_africana
ENSORLG00015023030	ddx28	93	47.674	ENSMMUG00000010836	DDX28	93	47.674	Macaca_mulatta
ENSORLG00015023030	ddx28	95	76.291	ENSMAMG00000020220	ddx28	93	76.291	Mastacembelus_armatus
ENSORLG00015023030	ddx28	98	75.046	ENSMZEG00005009292	ddx28	97	75.046	Maylandia_zebra
ENSORLG00015023030	ddx28	92	39.571	ENSMICG00000012346	-	93	39.571	Microcebus_murinus
ENSORLG00015023030	ddx28	91	48.627	ENSMOCG00000009815	Ddx28	93	48.627	Microtus_ochrogaster
ENSORLG00015023030	ddx28	94	73.541	ENSMMOG00000000270	ddx28	92	73.541	Mola_mola
ENSORLG00015023030	ddx28	93	48.054	ENSMODG00000005303	DDX28	93	49.027	Monodelphis_domestica
ENSORLG00015023030	ddx28	96	75.803	ENSMALG00000008864	ddx28	93	75.803	Monopterus_albus
ENSORLG00015023030	ddx28	91	48.047	MGP_CAROLIEiJ_G0031510	Ddx28	93	48.047	Mus_caroli
ENSORLG00015023030	ddx28	91	47.852	ENSMUSG00000045538	Ddx28	93	47.852	Mus_musculus
ENSORLG00015023030	ddx28	91	47.860	MGP_PahariEiJ_G0023110	Ddx28	93	47.860	Mus_pahari
ENSORLG00015023030	ddx28	91	47.647	MGP_SPRETEiJ_G0032628	Ddx28	93	47.647	Mus_spretus
ENSORLG00015023030	ddx28	70	48.601	ENSMPUG00000006915	DDX28	97	48.601	Mustela_putorius_furo
ENSORLG00015023030	ddx28	92	48.054	ENSMLUG00000005899	DDX28	94	48.054	Myotis_lucifugus
ENSORLG00015023030	ddx28	91	48.141	ENSNGAG00000015762	Ddx28	99	46.606	Nannospalax_galili
ENSORLG00015023030	ddx28	98	74.863	ENSNBRG00000001337	ddx28	99	74.863	Neolamprologus_brichardi
ENSORLG00015023030	ddx28	98	75.774	ENSONIG00000020597	ddx28	97	75.774	Oreochromis_niloticus
ENSORLG00015023030	ddx28	50	52.878	ENSOANG00000003551	-	96	52.878	Ornithorhynchus_anatinus
ENSORLG00015023030	ddx28	92	49.709	ENSOCUG00000023074	DDX28	94	49.709	Oryctolagus_cuniculus
ENSORLG00015023030	ddx28	99	97.628	ENSORLG00000011968	ddx28	99	97.628	Oryzias_latipes
ENSORLG00015023030	ddx28	100	98.543	ENSORLG00020001951	ddx28	100	98.543	Oryzias_latipes_hni
ENSORLG00015023030	ddx28	99	87.319	ENSOMEG00000012445	ddx28	99	87.319	Oryzias_melastigma
ENSORLG00015023030	ddx28	93	48.936	ENSOGAG00000016895	DDX28	94	48.936	Otolemur_garnettii
ENSORLG00015023030	ddx28	80	47.216	ENSOARG00000003313	DDX28	99	47.216	Ovis_aries
ENSORLG00015023030	ddx28	93	46.124	ENSPPAG00000036971	DDX28	94	46.124	Pan_paniscus
ENSORLG00015023030	ddx28	92	49.031	ENSPPRG00000018322	DDX28	94	49.031	Panthera_pardus
ENSORLG00015023030	ddx28	92	47.481	ENSPTIG00000006444	DDX28	94	47.481	Panthera_tigris_altaica
ENSORLG00015023030	ddx28	93	48.256	ENSPTRG00000008258	DDX28	94	48.256	Pan_troglodytes
ENSORLG00015023030	ddx28	93	64.008	ENSPKIG00000021200	ddx28	94	64.008	Paramormyrops_kingsleyae
ENSORLG00015023030	ddx28	50	58.333	ENSPSIG00000001127	DDX28	91	58.333	Pelodiscus_sinensis
ENSORLG00015023030	ddx28	97	67.468	ENSPMGG00000007908	ddx28	95	67.468	Periophthalmus_magnuspinnatus
ENSORLG00015023030	ddx28	91	47.656	ENSPEMG00000003395	Ddx28	93	47.656	Peromyscus_maniculatus_bairdii
ENSORLG00015023030	ddx28	50	46.931	ENSPMAG00000006983	DDX28	92	46.931	Petromyzon_marinus
ENSORLG00015023030	ddx28	96	76.660	ENSPFOG00000020952	ddx28	92	76.660	Poecilia_formosa
ENSORLG00015023030	ddx28	96	76.660	ENSPFOG00000020838	DDX28	93	76.660	Poecilia_formosa
ENSORLG00015023030	ddx28	96	75.901	ENSPLAG00000016292	ddx28	92	75.901	Poecilia_latipinna
ENSORLG00015023030	ddx28	96	76.850	ENSPMEG00000011311	ddx28	91	76.850	Poecilia_mexicana
ENSORLG00015023030	ddx28	96	76.660	ENSPREG00000002899	ddx28	92	76.660	Poecilia_reticulata
ENSORLG00015023030	ddx28	93	48.062	ENSPPYG00000007481	DDX28	94	48.062	Pongo_abelii
ENSORLG00015023030	ddx28	92	48.932	ENSPCOG00000024632	DDX28	94	48.932	Propithecus_coquereli
ENSORLG00015023030	ddx28	98	75.046	ENSPNYG00000018804	ddx28	97	75.046	Pundamilia_nyererei
ENSORLG00015023030	ddx28	94	62.830	ENSPNAG00000014597	ddx28	97	62.830	Pygocentrus_nattereri
ENSORLG00015023030	ddx28	91	47.868	ENSRNOG00000019817	Ddx28	93	47.868	Rattus_norvegicus
ENSORLG00015023030	ddx28	93	63.566	ENSSFOG00015010181	ddx28	99	61.483	Scleropages_formosus
ENSORLG00015023030	ddx28	93	76.413	ENSSMAG00000006831	ddx28	96	76.413	Scophthalmus_maximus
ENSORLG00015023030	ddx28	99	75.893	ENSSDUG00000003257	ddx28	98	75.893	Seriola_dumerili
ENSORLG00015023030	ddx28	99	75.179	ENSSLDG00000004513	ddx28	98	75.179	Seriola_lalandi_dorsalis
ENSORLG00015023030	ddx28	92	48.638	ENSSARG00000014169	DDX28	94	48.638	Sorex_araneus
ENSORLG00015023030	ddx28	99	73.921	ENSSPAG00000000988	ddx28	99	73.921	Stegastes_partitus
ENSORLG00015023030	ddx28	92	48.155	ENSSSCG00000026038	DDX28	94	48.062	Sus_scrofa
ENSORLG00015023030	ddx28	93	73.031	ENSTRUG00000007815	ddx28	92	73.031	Takifugu_rubripes
ENSORLG00015023030	ddx28	91	71.713	ENSTNIG00000011352	ddx28	99	71.713	Tetraodon_nigroviridis
ENSORLG00015023030	ddx28	75	60.094	ENSTBEG00000017695	DDX28	76	60.094	Tupaia_belangeri
ENSORLG00015023030	ddx28	92	48.638	ENSUAMG00000016116	DDX28	99	47.514	Ursus_americanus
ENSORLG00015023030	ddx28	79	50.000	ENSUMAG00000019200	DDX28	88	50.000	Ursus_maritimus
ENSORLG00015023030	ddx28	75	43.128	ENSVVUG00000012876	DDX28	82	43.128	Vulpes_vulpes
ENSORLG00015023030	ddx28	91	47.305	ENSXETG00000005435	ddx28	97	47.305	Xenopus_tropicalis
ENSORLG00015023030	ddx28	96	76.660	ENSXCOG00000012364	ddx28	93	76.660	Xiphophorus_couchianus
ENSORLG00015023030	ddx28	93	77.432	ENSXMAG00000019603	ddx28	93	77.432	Xiphophorus_maculatus