EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015023093 (Gene tree)
Gene ID: -
Gene Symbol: sfswap
Alias: -
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 57317 bases
Position: chr12:17001834-17059150
Accession: 101155209
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015021767	DRY_EERY	PF09750.9	4.1e-32	1	1
ENSORLP00015000203	DRY_EERY	PF09750.9	4.2e-32	1	1
ENSORLP00015021767	Surp	PF01805.20	1e-28	1	2
ENSORLP00015021767	Surp	PF01805.20	1e-28	2	2
ENSORLP00015000203	Surp	PF01805.20	1.1e-28	1	2
ENSORLP00015000203	Surp	PF01805.20	1.1e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015014719	-	3640	XM_011481916	ENSORLP00015021767	940 (aa)	XP_011480218	-
ENSORLT00015014724	-	6057	-	ENSORLP00015000203	953 (aa)	-	-

Gene Model

Click here to download ENSORLG00015023093's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015023093's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015023093	sfswap	89	67.302	ENSG00000061936	SFSWAP	67	80.247	Homo_sapiens
ENSORLG00015023093	sfswap	94	95.652	ENSAPOG00000005784	sfswap	75	95.652	Acanthochromis_polyacanthus
ENSORLG00015023093	sfswap	97	56.620	ENSAMEG00000013818	SFSWAP	82	58.298	Ailuropoda_melanoleuca
ENSORLG00015023093	sfswap	77	80.000	ENSAOCG00000016469	sfswap	75	79.586	Amphiprion_ocellaris
ENSORLG00015023093	sfswap	77	80.276	ENSAPEG00000004965	sfswap	76	79.862	Amphiprion_percula
ENSORLG00015023093	sfswap	79	77.644	ENSATEG00000021053	sfswap	79	77.322	Anabas_testudineus
ENSORLG00015023093	sfswap	74	56.764	ENSANAG00000001518	SFSWAP	86	56.499	Aotus_nancymaae
ENSORLG00015023093	sfswap	77	79.890	ENSACLG00000020159	sfswap	79	80.028	Astatotilapia_calliptera
ENSORLG00015023093	sfswap	72	65.049	ENSAMXG00000008657	sfswap	72	66.900	Astyanax_mexicanus
ENSORLG00015023093	sfswap	86	56.671	ENSBTAG00000000439	SFSWAP	85	56.159	Bos_taurus
ENSORLG00015023093	sfswap	99	50.200	ENSCJAG00000003613	SFSWAP	80	56.574	Callithrix_jacchus
ENSORLG00015023093	sfswap	86	59.914	ENSCAFG00000006625	SFSWAP	80	59.971	Canis_familiaris
ENSORLG00015023093	sfswap	87	45.704	ENSCAFG00020011254	SFSWAP	66	55.495	Canis_lupus_dingo
ENSORLG00015023093	sfswap	50	67.480	ENSCHIG00000008838	SFSWAP	82	57.836	Capra_hircus
ENSORLG00015023093	sfswap	56	62.531	ENSCCAG00000037255	SFSWAP	86	55.952	Cebus_capucinus
ENSORLG00015023093	sfswap	72	54.025	ENSCATG00000031094	SFSWAP	86	55.762	Cercocebus_atys
ENSORLG00015023093	sfswap	81	57.237	ENSCHOG00000003578	SFSWAP	84	58.696	Choloepus_hoffmanni
ENSORLG00015023093	sfswap	97	52.192	ENSCPBG00000024757	SFSWAP	80	58.782	Chrysemys_picta_bellii
ENSORLG00015023093	sfswap	78	74.601	ENSCSEG00000003773	sfswap	76	74.966	Cynoglossus_semilaevis
ENSORLG00015023093	sfswap	72	67.465	ENSDARG00000005980	sfswap	73	68.741	Danio_rerio
ENSORLG00015023093	sfswap	99	49.058	ENSDNOG00000018742	SFSWAP	83	58.540	Dasypus_novemcinctus
ENSORLG00015023093	sfswap	61	58.527	ENSDORG00000010352	Sfswap	70	53.266	Dipodomys_ordii
ENSORLG00015023093	sfswap	54	100.000	ENSETEG00000016657	-	67	100.000	Echinops_telfairi
ENSORLG00015023093	sfswap	85	32.984	ENSEBUG00000016748	SFSWAP	73	38.855	Eptatretus_burgeri
ENSORLG00015023093	sfswap	86	59.634	ENSEASG00005016502	SFSWAP	82	59.085	Equus_asinus_asinus
ENSORLG00015023093	sfswap	86	59.775	ENSECAG00000007657	SFSWAP	82	59.085	Equus_caballus
ENSORLG00015023093	sfswap	84	49.660	ENSEEUG00000001713	SFSWAP	63	63.743	Erinaceus_europaeus
ENSORLG00015023093	sfswap	99	58.672	ENSELUG00000010942	sfswap	94	63.447	Esox_lucius
ENSORLG00015023093	sfswap	97	53.751	ENSFCAG00000010778	SFSWAP	70	60.522	Felis_catus
ENSORLG00015023093	sfswap	68	59.019	ENSFALG00000009577	SFSWAP	75	58.167	Ficedula_albicollis
ENSORLG00015023093	sfswap	100	75.767	ENSGAFG00000006272	sfswap	79	77.915	Gambusia_affinis
ENSORLG00015023093	sfswap	80	68.188	ENSGACG00000017647	sfswap	98	65.416	Gasterosteus_aculeatus
ENSORLG00015023093	sfswap	97	52.020	ENSGAGG00000002611	SFSWAP	80	58.782	Gopherus_agassizii
ENSORLG00015023093	sfswap	53	63.158	ENSGGOG00000014877	SFSWAP	86	56.192	Gorilla_gorilla
ENSORLG00015023093	sfswap	77	79.642	ENSHBUG00000005629	sfswap	74	79.780	Haplochromis_burtoni
ENSORLG00015023093	sfswap	100	68.730	ENSHCOG00000009475	sfswap	77	72.517	Hippocampus_comes
ENSORLG00015023093	sfswap	86	68.534	ENSIPUG00000010598	sfswap	74	68.085	Ictalurus_punctatus
ENSORLG00015023093	sfswap	77	77.610	ENSKMAG00000013168	sfswap	75	77.945	Kryptolebias_marmoratus
ENSORLG00015023093	sfswap	75	77.700	ENSLBEG00000010239	sfswap	78	77.840	Labrus_bergylta
ENSORLG00015023093	sfswap	71	55.775	ENSLACG00000018678	SFSWAP	71	56.942	Latimeria_chalumnae
ENSORLG00015023093	sfswap	98	49.902	ENSMFAG00000037352	SFSWAP	84	56.486	Macaca_fascicularis
ENSORLG00015023093	sfswap	72	56.929	ENSMMUG00000020343	SFSWAP	75	56.486	Macaca_mulatta
ENSORLG00015023093	sfswap	91	56.929	ENSMNEG00000041002	SFSWAP	84	56.486	Macaca_nemestrina
ENSORLG00015023093	sfswap	57	58.750	ENSMLEG00000035728	SFSWAP	85	54.122	Mandrillus_leucophaeus
ENSORLG00015023093	sfswap	100	76.285	ENSMAMG00000006631	sfswap	76	78.363	Mastacembelus_armatus
ENSORLG00015023093	sfswap	77	79.890	ENSMZEG00005017834	SFSWAP	75	80.028	Maylandia_zebra
ENSORLG00015023093	sfswap	56	63.317	ENSMICG00000004465	SFSWAP	83	57.975	Microcebus_murinus
ENSORLG00015023093	sfswap	57	61.774	ENSMODG00000015581	SFSWAP	68	53.343	Monodelphis_domestica
ENSORLG00015023093	sfswap	77	76.471	ENSMALG00000012603	sfswap	82	75.787	Monopterus_albus
ENSORLG00015023093	sfswap	71	57.563	ENSMPUG00000002218	SFSWAP	73	59.078	Mustela_putorius_furo
ENSORLG00015023093	sfswap	71	56.764	ENSMLUG00000011296	SFSWAP	77	58.889	Myotis_lucifugus
ENSORLG00015023093	sfswap	71	78.326	ENSNBRG00000020857	sfswap	73	78.916	Neolamprologus_brichardi
ENSORLG00015023093	sfswap	72	56.233	ENSNLEG00000008386	SFSWAP	84	56.911	Nomascus_leucogenys
ENSORLG00015023093	sfswap	71	65.014	ENSOPRG00000006983	-	75	60.643	Ochotona_princeps
ENSORLG00015023093	sfswap	88	71.332	ENSONIG00000003757	sfswap	88	73.171	Oreochromis_niloticus
ENSORLG00015023093	sfswap	100	97.983	ENSORLG00000010983	sfswap	100	97.983	Oryzias_latipes
ENSORLG00015023093	sfswap	100	97.775	ENSORLG00020010779	sfswap	100	97.775	Oryzias_latipes_hni
ENSORLG00015023093	sfswap	77	92.649	ENSOMEG00000022065	sfswap	77	92.445	Oryzias_melastigma
ENSORLG00015023093	sfswap	53	63.092	ENSOARG00000014314	SFSWAP	86	55.968	Ovis_aries
ENSORLG00015023093	sfswap	89	67.575	ENSPPAG00000036706	SFSWAP	82	58.217	Pan_paniscus
ENSORLG00015023093	sfswap	97	50.539	ENSPPRG00000017318	SFSWAP	80	59.475	Panthera_pardus
ENSORLG00015023093	sfswap	96	49.053	ENSPTIG00000004304	SFSWAP	68	66.120	Panthera_tigris_altaica
ENSORLG00015023093	sfswap	89	67.575	ENSPTRG00000005640	SFSWAP	82	58.217	Pan_troglodytes
ENSORLG00015023093	sfswap	72	54.025	ENSPANG00000019737	SFSWAP	86	55.762	Papio_anubis
ENSORLG00015023093	sfswap	74	62.483	ENSPKIG00000008327	sfswap	77	63.251	Paramormyrops_kingsleyae
ENSORLG00015023093	sfswap	55	62.312	ENSPEMG00000001237	Sfswap	73	57.917	Peromyscus_maniculatus_bairdii
ENSORLG00015023093	sfswap	85	68.278	ENSPCIG00000006062	SFSWAP	69	56.776	Phascolarctos_cinereus
ENSORLG00015023093	sfswap	100	76.190	ENSPFOG00000019657	sfswap	77	78.621	Poecilia_formosa
ENSORLG00015023093	sfswap	100	75.979	ENSPLAG00000008513	sfswap	77	78.621	Poecilia_latipinna
ENSORLG00015023093	sfswap	77	78.767	ENSPMEG00000008716	sfswap	78	78.493	Poecilia_mexicana
ENSORLG00015023093	sfswap	100	75.869	ENSPREG00000006692	sfswap	77	78.082	Poecilia_reticulata
ENSORLG00015023093	sfswap	52	58.032	ENSPCAG00000004977	-	60	57.570	Procavia_capensis
ENSORLG00015023093	sfswap	59	67.663	ENSPVAG00000014918	SFSWAP	58	65.823	Pteropus_vampyrus
ENSORLG00015023093	sfswap	77	79.780	ENSPNYG00000012660	sfswap	92	79.917	Pundamilia_nyererei
ENSORLG00015023093	sfswap	72	64.673	ENSPNAG00000007073	sfswap	73	67.137	Pygocentrus_nattereri
ENSORLG00015023093	sfswap	91	62.283	ENSRBIG00000036330	SFSWAP	75	54.825	Rhinopithecus_bieti
ENSORLG00015023093	sfswap	66	62.283	ENSSBOG00000026217	SFSWAP	76	55.820	Saimiri_boliviensis_boliviensis
ENSORLG00015023093	sfswap	67	66.465	ENSSFOG00015000766	sfswap	70	67.527	Scleropages_formosus
ENSORLG00015023093	sfswap	77	77.612	ENSSMAG00000018718	sfswap	76	77.038	Scophthalmus_maximus
ENSORLG00015023093	sfswap	78	79.217	ENSSDUG00000021680	sfswap	74	79.589	Seriola_dumerili
ENSORLG00015023093	sfswap	78	79.082	ENSSLDG00000010835	sfswap	74	79.041	Seriola_lalandi_dorsalis
ENSORLG00015023093	sfswap	59	53.431	ENSSPUG00000010272	SFSWAP	70	54.323	Sphenodon_punctatus
ENSORLG00015023093	sfswap	76	79.473	ENSSPAG00000014310	sfswap	77	79.258	Stegastes_partitus
ENSORLG00015023093	sfswap	71	57.361	ENSSSCG00000009744	SFSWAP	73	58.391	Sus_scrofa
ENSORLG00015023093	sfswap	75	80.488	ENSTTRG00000013478	SFSWAP	63	66.209	Tursiops_truncatus
ENSORLG00015023093	sfswap	86	58.203	ENSUAMG00000016807	SFSWAP	81	59.429	Ursus_americanus
ENSORLG00015023093	sfswap	64	68.208	ENSUMAG00000002957	SFSWAP	74	67.536	Ursus_maritimus
ENSORLG00015023093	sfswap	69	60.143	ENSVVUG00000010753	SFSWAP	70	60.204	Vulpes_vulpes
ENSORLG00015023093	sfswap	97	46.584	ENSXETG00000009350	sfswap	88	60.172	Xenopus_tropicalis
ENSORLG00015023093	sfswap	77	78.297	ENSXMAG00000009020	sfswap	77	78.022	Xiphophorus_maculatus