EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020000082 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 15530 bases
Position: chr17:27438960-27454489
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020003565	RRM_1	PF00076.22	3.7e-12	1	1
ENSORLP00020003576	RRM_1	PF00076.22	3.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020009383	-	4622	-	ENSORLP00020003576	288 (aa)	-	-
ENSORLT00020009405	-	4224	-	ENSORLP00020003565	288 (aa)	-	-

Gene Model

Click here to download ENSORLG00020000082's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020000082's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020000082	-	75	51.339	ENSORLG00020018228	hnrnpc	68	53.097
ENSORLG00020000082	-	100	70.270	ENSORLG00020004438	-	100	71.284

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020000082	-	100	86.644	ENSAPOG00000008744	-	100	86.644	Acanthochromis_polyacanthus
ENSORLG00020000082	-	97	79.038	ENSACIG00000007143	-	97	79.381	Amphilophus_citrinellus
ENSORLG00020000082	-	100	88.356	ENSAOCG00000023599	-	100	88.699	Amphiprion_ocellaris
ENSORLG00020000082	-	100	70.946	ENSAOCG00000001605	-	100	71.622	Amphiprion_ocellaris
ENSORLG00020000082	-	84	71.545	ENSATEG00000023356	-	96	70.518	Anabas_testudineus
ENSORLG00020000082	-	97	82.373	ENSATEG00000022219	-	93	82.712	Anabas_testudineus
ENSORLG00020000082	-	100	70.608	ENSACLG00000006949	-	100	71.284	Astatotilapia_calliptera
ENSORLG00020000082	-	100	87.671	ENSACLG00000011720	-	100	87.671	Astatotilapia_calliptera
ENSORLG00020000082	-	100	63.423	ENSAMXG00000032617	-	90	64.925	Astyanax_mexicanus
ENSORLG00020000082	-	100	70.608	ENSAMXG00000019031	-	100	70.946	Astyanax_mexicanus
ENSORLG00020000082	-	100	76.370	ENSCSEG00000014237	-	100	76.712	Cynoglossus_semilaevis
ENSORLG00020000082	-	100	86.986	ENSCVAG00000013624	-	100	87.329	Cyprinodon_variegatus
ENSORLG00020000082	-	100	70.608	ENSCVAG00000018104	-	100	70.946	Cyprinodon_variegatus
ENSORLG00020000082	-	63	71.038	ENSDARG00000090292	ralyl	81	77.778	Danio_rerio
ENSORLG00020000082	-	97	61.620	ENSELUG00000001702	-	92	61.255	Esox_lucius
ENSORLG00020000082	-	57	72.727	ENSGMOG00000005914	-	100	72.727	Gadus_morhua
ENSORLG00020000082	-	61	78.090	ENSGACG00000004991	-	91	81.928	Gasterosteus_aculeatus
ENSORLG00020000082	-	100	70.608	ENSHBUG00000015412	-	100	71.284	Haplochromis_burtoni
ENSORLG00020000082	-	100	87.671	ENSHBUG00000010040	-	100	88.014	Haplochromis_burtoni
ENSORLG00020000082	-	100	70.608	ENSIPUG00000000507	ralyl	100	70.946	Ictalurus_punctatus
ENSORLG00020000082	-	100	83.904	ENSKMAG00000022093	-	100	84.932	Kryptolebias_marmoratus
ENSORLG00020000082	-	100	69.932	ENSKMAG00000018155	-	100	70.270	Kryptolebias_marmoratus
ENSORLG00020000082	-	100	83.904	ENSLBEG00000012873	-	100	84.247	Labrus_bergylta
ENSORLG00020000082	-	100	71.284	ENSLBEG00000011011	-	100	70.946	Labrus_bergylta
ENSORLG00020000082	-	100	69.932	ENSLOCG00000012787	ralyl	99	68.581	Lepisosteus_oculatus
ENSORLG00020000082	-	99	82.759	ENSMAMG00000001723	-	97	83.103	Mastacembelus_armatus
ENSORLG00020000082	-	100	87.671	ENSMZEG00005024447	-	100	87.671	Maylandia_zebra
ENSORLG00020000082	-	97	69.178	ENSMZEG00005018748	-	93	69.928	Maylandia_zebra
ENSORLG00020000082	-	97	78.041	ENSMMOG00000020441	-	86	80.405	Mola_mola
ENSORLG00020000082	-	100	68.919	ENSMALG00000012952	-	100	69.595	Monopterus_albus
ENSORLG00020000082	-	100	86.644	ENSMALG00000019019	-	78	86.986	Monopterus_albus
ENSORLG00020000082	-	97	75.342	ENSNBRG00000011206	-	97	79.038	Neolamprologus_brichardi
ENSORLG00020000082	-	97	68.836	ENSNBRG00000011376	-	93	70.290	Neolamprologus_brichardi
ENSORLG00020000082	-	100	70.270	ENSORLG00000012719	-	100	71.284	Oryzias_latipes
ENSORLG00020000082	-	100	98.958	ENSORLG00000017934	-	100	98.958	Oryzias_latipes
ENSORLG00020000082	-	100	98.264	ENSORLG00015004280	-	100	98.264	Oryzias_latipes_hsok
ENSORLG00020000082	-	100	70.270	ENSORLG00015004727	-	100	71.284	Oryzias_latipes_hsok
ENSORLG00020000082	-	100	70.270	ENSOMEG00000001170	-	100	71.284	Oryzias_melastigma
ENSORLG00020000082	-	100	90.000	ENSOMEG00000011821	-	100	90.000	Oryzias_melastigma
ENSORLG00020000082	-	100	69.128	ENSPKIG00000015926	-	100	69.625	Paramormyrops_kingsleyae
ENSORLG00020000082	-	79	67.811	ENSPMGG00000014481	-	95	68.670	Periophthalmus_magnuspinnatus
ENSORLG00020000082	-	97	70.790	ENSPMGG00000009532	-	91	72.263	Periophthalmus_magnuspinnatus
ENSORLG00020000082	-	97	82.653	ENSPFOG00000006120	-	99	82.993	Poecilia_formosa
ENSORLG00020000082	-	97	70.345	ENSPLAG00000011323	ralyl	94	71.533	Poecilia_latipinna
ENSORLG00020000082	-	97	80.142	ENSPLAG00000009877	-	76	80.142	Poecilia_latipinna
ENSORLG00020000082	-	97	70.345	ENSPMEG00000023847	ralyl	94	71.533	Poecilia_mexicana
ENSORLG00020000082	-	97	80.142	ENSPMEG00000013624	-	79	80.142	Poecilia_mexicana
ENSORLG00020000082	-	97	70.345	ENSPREG00000001956	ralyl	94	70.803	Poecilia_reticulata
ENSORLG00020000082	-	97	86.219	ENSPREG00000013805	-	100	80.449	Poecilia_reticulata
ENSORLG00020000082	-	97	75.342	ENSPNYG00000008772	-	97	79.038	Pundamilia_nyererei
ENSORLG00020000082	-	97	69.178	ENSPNYG00000003548	-	93	69.928	Pundamilia_nyererei
ENSORLG00020000082	-	100	69.595	ENSPNAG00000000498	-	88	69.932	Pygocentrus_nattereri
ENSORLG00020000082	-	100	64.726	ENSPNAG00000026098	-	100	64.726	Pygocentrus_nattereri
ENSORLG00020000082	-	100	58.703	ENSSFOG00015004575	-	100	58.703	Scleropages_formosus
ENSORLG00020000082	-	100	71.622	ENSSFOG00015009401	-	100	71.959	Scleropages_formosus
ENSORLG00020000082	-	97	82.456	ENSSMAG00000015907	-	93	82.807	Scophthalmus_maximus
ENSORLG00020000082	-	100	70.608	ENSSMAG00000005608	-	100	70.946	Scophthalmus_maximus
ENSORLG00020000082	-	100	70.270	ENSSDUG00000007587	-	100	70.946	Seriola_dumerili
ENSORLG00020000082	-	100	88.699	ENSSDUG00000012473	-	100	89.041	Seriola_dumerili
ENSORLG00020000082	-	100	88.356	ENSSLDG00000011534	-	100	88.699	Seriola_lalandi_dorsalis
ENSORLG00020000082	-	100	69.932	ENSSLDG00000020603	-	100	70.608	Seriola_lalandi_dorsalis
ENSORLG00020000082	-	97	76.157	ENSSPAG00000013858	-	96	74.483	Stegastes_partitus
ENSORLG00020000082	-	97	81.979	ENSTRUG00000003829	-	95	80.919	Takifugu_rubripes
ENSORLG00020000082	-	97	77.551	ENSTNIG00000005594	-	99	77.551	Tetraodon_nigroviridis
ENSORLG00020000082	-	100	62.081	ENSXETG00000017729	ralyl	99	62.416	Xenopus_tropicalis
ENSORLG00020000082	-	97	68.121	ENSXCOG00000015156	-	88	69.504	Xiphophorus_couchianus
ENSORLG00020000082	-	100	86.301	ENSXMAG00000007614	-	100	86.644	Xiphophorus_maculatus
ENSORLG00020000082	-	100	70.946	ENSXMAG00000008396	-	100	71.622	Xiphophorus_maculatus