EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020000181 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 7452 bases
Position: chr9:4311447-4318898
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020007440	zf-C2H2	PF00096.26	2.6e-31	1	6
ENSORLP00020007440	zf-C2H2	PF00096.26	2.6e-31	2	6
ENSORLP00020007440	zf-C2H2	PF00096.26	2.6e-31	3	6
ENSORLP00020007440	zf-C2H2	PF00096.26	2.6e-31	4	6
ENSORLP00020007440	zf-C2H2	PF00096.26	2.6e-31	5	6
ENSORLP00020007440	zf-C2H2	PF00096.26	2.6e-31	6	6
ENSORLP00020007440	zf-met	PF12874.7	1e-06	1	2
ENSORLP00020007440	zf-met	PF12874.7	1e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020002904	-	6195	-	ENSORLP00020007440	841 (aa)	-	-

Gene Model

Click here to download ENSORLG00020000181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020000181's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020000181	-	65	46.330	ENSORLG00020011149	-	74	46.330
ENSORLG00020000181	-	53	42.929	ENSORLG00020007599	-	92	42.929

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020000181	-	100	97.503	ENSORLG00000027054	-	100	97.503	Oryzias_latipes
ENSORLG00020000181	-	100	94.656	ENSORLG00015017539	-	100	94.893	Oryzias_latipes_hsok
ENSORLG00020000181	-	99	72.024	ENSOMEG00000013771	-	99	71.882	Oryzias_melastigma