EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020000277 (Gene tree)
Gene ID: -
Gene Symbol: pan2
Alias: -
Full Name: poly(A) specific ribonuclease subunit PAN2
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 17446 bases
Position: chr7:21614290-21631735
Accession: ZDB-GENE-030131-3113
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020010246	RNase_T	PF00929.24	5.5e-20	1	1
ENSORLP00020027919	RNase_T	PF00929.24	5.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020016817	-	3654	-	ENSORLP00020027919	1217 (aa)	-	-
ENSORLT00020016849	-	5571	-	ENSORLP00020010246	1206 (aa)	-	-

Gene Model

Click here to download ENSORLG00020000277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020000277's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020000277	pan2	100	92.206	ENSAPOG00000022955	pan2	99	92.289	Acanthochromis_polyacanthus
ENSORLG00020000277	pan2	100	75.144	ENSAMEG00000003824	PAN2	100	75.144	Ailuropoda_melanoleuca
ENSORLG00020000277	pan2	99	71.057	ENSACIG00000012858	PAN2	99	70.628	Amphilophus_citrinellus
ENSORLG00020000277	pan2	99	89.140	ENSACIG00000013079	pan2	99	89.223	Amphilophus_citrinellus
ENSORLG00020000277	pan2	100	92.454	ENSAOCG00000022334	pan2	99	92.454	Amphiprion_ocellaris
ENSORLG00020000277	pan2	100	92.066	ENSAPEG00000022760	pan2	99	92.066	Amphiprion_percula
ENSORLG00020000277	pan2	99	92.815	ENSATEG00000024030	pan2	100	92.899	Anabas_testudineus
ENSORLG00020000277	pan2	94	76.916	ENSAPLG00000005195	PAN2	100	76.916	Anas_platyrhynchos
ENSORLG00020000277	pan2	100	76.218	ENSACAG00000007067	PAN2	100	76.218	Anolis_carolinensis
ENSORLG00020000277	pan2	100	74.815	ENSANAG00000036468	PAN2	99	80.053	Aotus_nancymaae
ENSORLG00020000277	pan2	100	92.149	ENSACLG00000023674	pan2	99	92.565	Astatotilapia_calliptera
ENSORLG00020000277	pan2	99	68.293	ENSACLG00000023821	pan2	99	69.003	Astatotilapia_calliptera
ENSORLG00020000277	pan2	99	85.250	ENSAMXG00000005418	pan2	98	85.750	Astyanax_mexicanus
ENSORLG00020000277	pan2	100	75.062	ENSBTAG00000004376	PAN2	100	75.062	Bos_taurus
ENSORLG00020000277	pan2	100	74.568	ENSCJAG00000011141	PAN2	100	74.568	Callithrix_jacchus
ENSORLG00020000277	pan2	100	74.979	ENSCAFG00000000119	PAN2	100	78.462	Canis_familiaris
ENSORLG00020000277	pan2	100	74.092	ENSCAFG00020024865	PAN2	100	73.845	Canis_lupus_dingo
ENSORLG00020000277	pan2	100	74.325	ENSCHIG00000026935	PAN2	100	73.917	Capra_hircus
ENSORLG00020000277	pan2	100	74.020	ENSTSYG00000006927	PAN2	100	77.411	Carlito_syrichta
ENSORLG00020000277	pan2	100	74.632	ENSCPOG00000014918	PAN2	100	74.468	Cavia_porcellus
ENSORLG00020000277	pan2	100	74.733	ENSCCAG00000036637	PAN2	99	79.787	Cebus_capucinus
ENSORLG00020000277	pan2	100	74.650	ENSCATG00000045076	PAN2	99	80.481	Cercocebus_atys
ENSORLG00020000277	pan2	100	74.632	ENSCLAG00000011700	PAN2	100	74.468	Chinchilla_lanigera
ENSORLG00020000277	pan2	100	74.403	ENSCSAG00000005173	PAN2	100	74.403	Chlorocebus_sabaeus
ENSORLG00020000277	pan2	100	76.568	ENSCPBG00000014029	PAN2	100	76.403	Chrysemys_picta_bellii
ENSORLG00020000277	pan2	76	61.516	ENSCSAVG00000003833	-	98	61.516	Ciona_savignyi
ENSORLG00020000277	pan2	100	73.273	ENSCANG00000017798	PAN2	100	73.026	Colobus_angolensis_palliatus
ENSORLG00020000277	pan2	100	75.144	ENSCGRG00001019707	Pan2	100	75.144	Cricetulus_griseus_chok1gshd
ENSORLG00020000277	pan2	100	74.428	ENSCGRG00000009996	Pan2	100	74.020	Cricetulus_griseus_crigri
ENSORLG00020000277	pan2	100	86.650	ENSCSEG00000021529	pan2	99	86.733	Cynoglossus_semilaevis
ENSORLG00020000277	pan2	100	92.040	ENSCVAG00000010197	pan2	99	92.057	Cyprinodon_variegatus
ENSORLG00020000277	pan2	100	85.336	ENSDARG00000074675	pan2	99	85.418	Danio_rerio
ENSORLG00020000277	pan2	100	74.938	ENSDNOG00000010940	PAN2	100	74.938	Dasypus_novemcinctus
ENSORLG00020000277	pan2	97	41.335	FBgn0033352	PAN2	98	40.590	Drosophila_melanogaster
ENSORLG00020000277	pan2	74	84.682	ENSETEG00000012041	PAN2	81	84.682	Echinops_telfairi
ENSORLG00020000277	pan2	98	56.725	ENSEBUG00000002773	pan2	99	64.530	Eptatretus_burgeri
ENSORLG00020000277	pan2	100	74.652	ENSEASG00005005235	PAN2	100	74.652	Equus_asinus_asinus
ENSORLG00020000277	pan2	100	75.144	ENSECAG00000019814	PAN2	100	75.144	Equus_caballus
ENSORLG00020000277	pan2	99	87.500	ENSELUG00000024604	pan2	99	87.500	Esox_lucius
ENSORLG00020000277	pan2	100	75.062	ENSFCAG00000012021	PAN2	100	75.062	Felis_catus
ENSORLG00020000277	pan2	99	76.839	ENSFALG00000000464	PAN2	98	76.672	Ficedula_albicollis
ENSORLG00020000277	pan2	100	74.673	ENSFDAG00000017104	PAN2	100	74.265	Fukomys_damarensis
ENSORLG00020000277	pan2	90	90.132	ENSFHEG00000000157	pan2	97	90.132	Fundulus_heteroclitus
ENSORLG00020000277	pan2	100	85.243	ENSGMOG00000007249	pan2	99	85.326	Gadus_morhua
ENSORLG00020000277	pan2	100	76.733	ENSGALG00000031512	PAN2	100	76.733	Gallus_gallus
ENSORLG00020000277	pan2	100	91.957	ENSGAFG00000000284	pan2	99	91.957	Gambusia_affinis
ENSORLG00020000277	pan2	100	89.539	ENSGACG00000010722	pan2	99	89.868	Gasterosteus_aculeatus
ENSORLG00020000277	pan2	100	75.970	ENSGAGG00000007868	PAN2	100	75.805	Gopherus_agassizii
ENSORLG00020000277	pan2	100	74.568	ENSGGOG00000009115	PAN2	99	80.481	Gorilla_gorilla
ENSORLG00020000277	pan2	100	92.454	ENSHBUG00000005234	pan2	99	92.703	Haplochromis_burtoni
ENSORLG00020000277	pan2	99	74.586	ENSHGLG00000005647	PAN2	99	73.377	Heterocephalus_glaber_female
ENSORLG00020000277	pan2	99	74.338	ENSHGLG00100014057	PAN2	99	72.802	Heterocephalus_glaber_male
ENSORLG00020000277	pan2	100	88.347	ENSHCOG00000007920	pan2	99	88.347	Hippocampus_comes
ENSORLG00020000277	pan2	100	85.041	ENSIPUG00000011065	PAN2	99	85.124	Ictalurus_punctatus
ENSORLG00020000277	pan2	94	74.873	ENSSTOG00000015974	PAN2	100	74.873	Ictidomys_tridecemlineatus
ENSORLG00020000277	pan2	100	74.486	ENSJJAG00000013044	Pan2	98	74.486	Jaculus_jaculus
ENSORLG00020000277	pan2	100	92.123	ENSKMAG00000006192	pan2	99	92.206	Kryptolebias_marmoratus
ENSORLG00020000277	pan2	97	86.149	ENSLBEG00000015763	pan2	99	86.149	Labrus_bergylta
ENSORLG00020000277	pan2	100	70.105	ENSLACG00000018694	PAN2	100	69.453	Latimeria_chalumnae
ENSORLG00020000277	pan2	100	84.609	ENSLOCG00000004333	pan2	99	84.691	Lepisosteus_oculatus
ENSORLG00020000277	pan2	100	72.727	ENSLAFG00000014873	PAN2	100	72.563	Loxodonta_africana
ENSORLG00020000277	pan2	100	74.486	ENSMFAG00000002293	PAN2	99	80.481	Macaca_fascicularis
ENSORLG00020000277	pan2	100	74.486	ENSMMUG00000013482	PAN2	100	77.273	Macaca_mulatta
ENSORLG00020000277	pan2	100	74.568	ENSMNEG00000033264	PAN2	99	80.214	Macaca_nemestrina
ENSORLG00020000277	pan2	100	74.650	ENSMLEG00000037388	PAN2	99	80.481	Mandrillus_leucophaeus
ENSORLG00020000277	pan2	100	92.786	ENSMAMG00000001624	pan2	100	92.786	Mastacembelus_armatus
ENSORLG00020000277	pan2	100	92.149	ENSMZEG00005026462	pan2	99	92.397	Maylandia_zebra
ENSORLG00020000277	pan2	98	70.608	ENSMZEG00005026472	pan2	99	70.524	Maylandia_zebra
ENSORLG00020000277	pan2	97	77.246	ENSMGAG00000001439	PAN2	99	77.246	Meleagris_gallopavo
ENSORLG00020000277	pan2	99	75.062	ENSMAUG00000012602	Pan2	99	74.896	Mesocricetus_auratus
ENSORLG00020000277	pan2	100	74.650	ENSMICG00000017661	PAN2	100	76.410	Microcebus_murinus
ENSORLG00020000277	pan2	100	74.815	ENSMOCG00000007191	Pan2	100	74.815	Microtus_ochrogaster
ENSORLG00020000277	pan2	99	90.643	ENSMMOG00000009313	pan2	98	89.866	Mola_mola
ENSORLG00020000277	pan2	100	91.736	ENSMALG00000013377	pan2	100	91.736	Monopterus_albus
ENSORLG00020000277	pan2	100	74.059	MGP_CAROLIEiJ_G0015930	Pan2	100	73.895	Mus_caroli
ENSORLG00020000277	pan2	100	74.691	ENSMUSG00000005682	Pan2	100	74.568	Mus_musculus
ENSORLG00020000277	pan2	100	74.223	MGP_PahariEiJ_G0031154	Pan2	100	74.059	Mus_pahari
ENSORLG00020000277	pan2	100	74.856	MGP_SPRETEiJ_G0016755	Pan2	100	74.897	Mus_spretus
ENSORLG00020000277	pan2	100	75.226	ENSMPUG00000001383	PAN2	100	75.226	Mustela_putorius_furo
ENSORLG00020000277	pan2	100	74.815	ENSMLUG00000006737	PAN2	100	74.815	Myotis_lucifugus
ENSORLG00020000277	pan2	100	74.979	ENSNGAG00000007930	Pan2	100	74.979	Nannospalax_galili
ENSORLG00020000277	pan2	92	96.279	ENSNBRG00000006585	pan2	99	96.279	Neolamprologus_brichardi
ENSORLG00020000277	pan2	100	70.337	ENSNLEG00000017499	PAN2	99	79.947	Nomascus_leucogenys
ENSORLG00020000277	pan2	100	76.030	ENSMEUG00000010125	PAN2	100	76.030	Notamacropus_eugenii
ENSORLG00020000277	pan2	100	74.466	ENSOPRG00000001468	PAN2	100	74.466	Ochotona_princeps
ENSORLG00020000277	pan2	100	74.286	ENSODEG00000007203	PAN2	100	73.878	Octodon_degus
ENSORLG00020000277	pan2	100	90.049	ENSONIG00000016732	pan2	100	89.723	Oreochromis_niloticus
ENSORLG00020000277	pan2	81	68.096	ENSOANG00000005151	PAN2	98	67.597	Ornithorhynchus_anatinus
ENSORLG00020000277	pan2	100	74.244	ENSOCUG00000007227	PAN2	100	74.080	Oryctolagus_cuniculus
ENSORLG00020000277	pan2	100	99.751	ENSORLG00000015195	pan2	100	99.751	Oryzias_latipes
ENSORLG00020000277	pan2	100	99.668	ENSORLG00015005193	pan2	100	99.668	Oryzias_latipes_hsok
ENSORLG00020000277	pan2	100	98.259	ENSOMEG00000022087	pan2	100	98.259	Oryzias_melastigma
ENSORLG00020000277	pan2	100	73.796	ENSOGAG00000030620	PAN2	100	73.633	Otolemur_garnettii
ENSORLG00020000277	pan2	100	74.897	ENSOARG00000009379	PAN2	100	74.897	Ovis_aries
ENSORLG00020000277	pan2	100	74.568	ENSPPAG00000001208	PAN2	99	80.481	Pan_paniscus
ENSORLG00020000277	pan2	100	74.979	ENSPPRG00000021586	PAN2	100	74.979	Panthera_pardus
ENSORLG00020000277	pan2	100	71.417	ENSPTIG00000012494	PAN2	100	71.417	Panthera_tigris_altaica
ENSORLG00020000277	pan2	100	74.568	ENSPTRG00000052054	PAN2	99	80.481	Pan_troglodytes
ENSORLG00020000277	pan2	92	76.097	ENSPANG00000018906	PAN2	99	80.481	Papio_anubis
ENSORLG00020000277	pan2	100	84.711	ENSPKIG00000003973	pan2	99	84.711	Paramormyrops_kingsleyae
ENSORLG00020000277	pan2	100	73.394	ENSPSIG00000003267	PAN2	100	73.394	Pelodiscus_sinensis
ENSORLG00020000277	pan2	100	88.235	ENSPMGG00000023186	pan2	100	88.235	Periophthalmus_magnuspinnatus
ENSORLG00020000277	pan2	100	74.020	ENSPEMG00000018505	Pan2	100	74.020	Peromyscus_maniculatus_bairdii
ENSORLG00020000277	pan2	91	67.269	ENSPMAG00000004731	pan2	100	67.029	Petromyzon_marinus
ENSORLG00020000277	pan2	100	76.568	ENSPCIG00000024643	PAN2	100	76.403	Phascolarctos_cinereus
ENSORLG00020000277	pan2	100	92.206	ENSPFOG00000008392	pan2	99	92.206	Poecilia_formosa
ENSORLG00020000277	pan2	100	92.206	ENSPLAG00000009198	pan2	99	92.206	Poecilia_latipinna
ENSORLG00020000277	pan2	100	92.123	ENSPMEG00000001484	pan2	99	92.123	Poecilia_mexicana
ENSORLG00020000277	pan2	100	92.371	ENSPREG00000000900	pan2	99	92.391	Poecilia_reticulata
ENSORLG00020000277	pan2	88	76.794	ENSPPYG00000004656	PAN2	99	77.245	Pongo_abelii
ENSORLG00020000277	pan2	92	76.302	ENSPCAG00000011047	PAN2	100	75.695	Procavia_capensis
ENSORLG00020000277	pan2	100	74.733	ENSPCOG00000018263	PAN2	100	74.733	Propithecus_coquereli
ENSORLG00020000277	pan2	94	72.910	ENSPVAG00000007591	PAN2	94	73.116	Pteropus_vampyrus
ENSORLG00020000277	pan2	99	92.398	ENSPNYG00000002629	pan2	99	92.648	Pundamilia_nyererei
ENSORLG00020000277	pan2	100	86.529	ENSPNAG00000027140	pan2	99	86.612	Pygocentrus_nattereri
ENSORLG00020000277	pan2	100	74.938	ENSRNOG00000032441	Pan2	100	74.815	Rattus_norvegicus
ENSORLG00020000277	pan2	100	74.486	ENSRBIG00000029591	PAN2	99	79.947	Rhinopithecus_bieti
ENSORLG00020000277	pan2	100	74.403	ENSRROG00000041950	PAN2	99	79.947	Rhinopithecus_roxellana
ENSORLG00020000277	pan2	81	36.591	YGL094C	-	97	33.398	Saccharomyces_cerevisiae
ENSORLG00020000277	pan2	100	74.650	ENSSBOG00000027343	PAN2	99	79.787	Saimiri_boliviensis_boliviensis
ENSORLG00020000277	pan2	92	76.444	ENSSHAG00000000122	PAN2	99	77.528	Sarcophilus_harrisii
ENSORLG00020000277	pan2	100	85.537	ENSSFOG00015017740	pan2	99	85.537	Scleropages_formosus
ENSORLG00020000277	pan2	100	90.504	ENSSMAG00000020901	pan2	99	90.504	Scophthalmus_maximus
ENSORLG00020000277	pan2	100	92.810	ENSSDUG00000001840	pan2	99	92.893	Seriola_dumerili
ENSORLG00020000277	pan2	100	92.952	ENSSLDG00000013866	pan2	99	93.035	Seriola_lalandi_dorsalis
ENSORLG00020000277	pan2	92	75.556	ENSSARG00000013350	PAN2	92	75.556	Sorex_araneus
ENSORLG00020000277	pan2	92	78.206	ENSSPUG00000004270	PAN2	99	78.027	Sphenodon_punctatus
ENSORLG00020000277	pan2	100	91.901	ENSSPAG00000019970	pan2	99	91.983	Stegastes_partitus
ENSORLG00020000277	pan2	100	74.733	ENSSSCG00000000393	PAN2	100	74.733	Sus_scrofa
ENSORLG00020000277	pan2	100	90.661	ENSTRUG00000014260	pan2	99	90.661	Takifugu_rubripes
ENSORLG00020000277	pan2	100	90.331	ENSTNIG00000012537	pan2	99	90.413	Tetraodon_nigroviridis
ENSORLG00020000277	pan2	80	74.339	ENSTTRG00000007150	PAN2	80	74.339	Tursiops_truncatus
ENSORLG00020000277	pan2	100	75.000	ENSUAMG00000026522	PAN2	100	74.753	Ursus_americanus
ENSORLG00020000277	pan2	100	74.510	ENSUMAG00000017020	PAN2	100	74.510	Ursus_maritimus
ENSORLG00020000277	pan2	79	91.133	ENSVPAG00000007309	PAN2	85	91.133	Vicugna_pacos
ENSORLG00020000277	pan2	100	75.062	ENSVVUG00000021878	PAN2	100	75.062	Vulpes_vulpes
ENSORLG00020000277	pan2	99	73.217	ENSXETG00000009434	pan2	100	74.348	Xenopus_tropicalis
ENSORLG00020000277	pan2	100	86.661	ENSXCOG00000014391	pan2	100	86.661	Xiphophorus_couchianus
ENSORLG00020000277	pan2	100	92.123	ENSXMAG00000011661	pan2	99	92.123	Xiphophorus_maculatus