EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00020000307 (Gene tree)
Gene ID
-
Gene Symbol
ythdf1
Alias
-
Full Name
YTH N(6)-methyladenosine RNA binding protein 1
Gene Type
protein_coding
Species
Oryzias_latipes_hni
Status
putative
Strand
Plus strand
Length
12264 bases
Position
chr7:21105237-21117500
Accession
ZDB-GENE-040426-2786
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00020011227YTHPF04146.153.9e-4111
ENSORLP00020028616YTHPF04146.154e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00020018076-4080-ENSORLP00020011227609 (aa)--
ENSORLT00020018089-5592-ENSORLP00020028616620 (aa)--
Gene Model
Click here to download ENSORLG00020000307's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020000307's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00020000307ythdf19756.210ENSORLG00020014684ythdf39757.236
ENSORLG00020000307ythdf19975.241ENSORLG00020001332YTHDF19975.767
ENSORLG00020000307ythdf19556.169ENSORLG00020013978ythdf29357.492
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00020000307ythdf19570.548ENSG00000149658YTHDF19670.242Homo_sapiens
ENSORLG00020000307ythdf19974.286ENSAPOG00000010796YTHDF19976.763Acanthochromis_polyacanthus
ENSORLG00020000307ythdf110089.228ENSAPOG00000004358ythdf110090.193Acanthochromis_polyacanthus
ENSORLG00020000307ythdf19581.122ENSACIG00000011264ythdf19681.293Amphilophus_citrinellus
ENSORLG00020000307ythdf19574.701ENSACIG00000020083YTHDF19675.779Amphilophus_citrinellus
ENSORLG00020000307ythdf19974.762ENSAOCG00000012567YTHDF19976.603Amphiprion_ocellaris
ENSORLG00020000307ythdf110089.533ENSAOCG00000022251ythdf110090.660Amphiprion_ocellaris
ENSORLG00020000307ythdf110089.533ENSAPEG00000021878ythdf110090.660Amphiprion_percula
ENSORLG00020000307ythdf19974.921ENSAPEG00000008750YTHDF19976.763Amphiprion_percula
ENSORLG00020000307ythdf110088.961ENSATEG00000023840ythdf110090.422Anabas_testudineus
ENSORLG00020000307ythdf19976.433ENSATEG00000005996YTHDF19976.640Anabas_testudineus
ENSORLG00020000307ythdf19471.875ENSAPLG00000005985YTHDF19571.579Anas_platyrhynchos
ENSORLG00020000307ythdf19570.719ENSACAG00000005560YTHDF19670.568Anolis_carolinensis
ENSORLG00020000307ythdf19759.153ENSANAG00000021022-9659.413Aotus_nancymaae
ENSORLG00020000307ythdf19569.863ENSANAG00000034786-9670.746Aotus_nancymaae
ENSORLG00020000307ythdf19976.886ENSACLG00000025518YTHDF19977.653Astatotilapia_calliptera
ENSORLG00020000307ythdf19569.655ENSBTAG00000010383YTHDF19670.498Bos_taurus
ENSORLG00020000307ythdf19569.692ENSCJAG00000010056YTHDF19669.948Callithrix_jacchus
ENSORLG00020000307ythdf18669.886ENSCAFG00000012772YTHDF19670.498Canis_familiaris
ENSORLG00020000307ythdf18669.886ENSCAFG00020001214YTHDF19670.498Canis_lupus_dingo
ENSORLG00020000307ythdf19568.448ENSCHIG00000026494YTHDF19669.723Capra_hircus
ENSORLG00020000307ythdf19271.708ENSTSYG00000033436YTHDF19471.326Carlito_syrichta
ENSORLG00020000307ythdf19370.775ENSCAPG00000002544YTHDF19071.583Cavia_aperea
ENSORLG00020000307ythdf19569.880ENSCPOG00000010202YTHDF19670.884Cavia_porcellus
ENSORLG00020000307ythdf19769.595ENSCCAG00000024650YTHDF19670.069Cebus_capucinus
ENSORLG00020000307ythdf19570.548ENSCATG00000033272YTHDF19670.934Cercocebus_atys
ENSORLG00020000307ythdf19571.062ENSCLAG00000005989YTHDF19670.588Chinchilla_lanigera
ENSORLG00020000307ythdf19570.548ENSCSAG00000016266YTHDF19670.934Chlorocebus_sabaeus
ENSORLG00020000307ythdf19572.089ENSCPBG00000027183YTHDF19671.799Chrysemys_picta_bellii
ENSORLG00020000307ythdf19470.486ENSCANG00000029082YTHDF19570.702Colobus_angolensis_palliatus
ENSORLG00020000307ythdf19770.995ENSCGRG00001016568Ythdf19670.242Cricetulus_griseus_chok1gshd
ENSORLG00020000307ythdf19471.154ENSCGRG00000009207Ythdf19670.246Cricetulus_griseus_crigri
ENSORLG00020000307ythdf19582.931ENSCSEG00000020623YTHDF19782.069Cynoglossus_semilaevis
ENSORLG00020000307ythdf19976.244ENSCVAG00000014378YTHDF19977.010Cyprinodon_variegatus
ENSORLG00020000307ythdf110087.175ENSCVAG00000017940ythdf110088.149Cyprinodon_variegatus
ENSORLG00020000307ythdf19979.221ENSDARG00000016447ythdf19980.744Danio_rerio
ENSORLG00020000307ythdf19570.034ENSDNOG00000043590YTHDF19670.934Dasypus_novemcinctus
ENSORLG00020000307ythdf19269.217ENSDORG00000002879Ythdf19169.821Dipodomys_ordii
ENSORLG00020000307ythdf18056.863ENSETEG00000017860-9654.902Echinops_telfairi
ENSORLG00020000307ythdf19869.064ENSEASG00005023186YTHDF19670.069Equus_asinus_asinus
ENSORLG00020000307ythdf19769.543ENSECAG00000019475YTHDF19670.690Equus_caballus
ENSORLG00020000307ythdf18771.186ENSEEUG00000007461YTHDF19670.209Erinaceus_europaeus
ENSORLG00020000307ythdf19970.923ENSELUG00000001906YTHDF19673.469Esox_lucius
ENSORLG00020000307ythdf19982.143ENSELUG00000022768ythdf19983.819Esox_lucius
ENSORLG00020000307ythdf19571.233ENSFALG00000010463YTHDF19671.280Ficedula_albicollis
ENSORLG00020000307ythdf19570.034ENSFDAG00000019602YTHDF19669.880Fukomys_damarensis
ENSORLG00020000307ythdf19975.835ENSFHEG00000002540YTHDF19976.480Fundulus_heteroclitus
ENSORLG00020000307ythdf110087.642ENSFHEG00000023218ythdf110088.455Fundulus_heteroclitus
ENSORLG00020000307ythdf19980.782ENSGMOG00000019610ythdf15584.257Gadus_morhua
ENSORLG00020000307ythdf19571.747ENSGALG00000005745YTHDF19671.648Gallus_gallus
ENSORLG00020000307ythdf19973.975ENSGAFG00000021100YTHDF19976.640Gambusia_affinis
ENSORLG00020000307ythdf19987.356ENSGACG00000012014ythdf19987.521Gasterosteus_aculeatus
ENSORLG00020000307ythdf19774.756ENSGACG00000002613YTHDF19775.125Gasterosteus_aculeatus
ENSORLG00020000307ythdf19572.089ENSGAGG00000003007YTHDF19671.799Gopherus_agassizii
ENSORLG00020000307ythdf19571.062ENSGGOG00000008340YTHDF19670.588Gorilla_gorilla
ENSORLG00020000307ythdf19989.655ENSHBUG00000011284ythdf19889.587Haplochromis_burtoni
ENSORLG00020000307ythdf19976.726ENSHBUG00000004875YTHDF19977.492Haplochromis_burtoni
ENSORLG00020000307ythdf19570.377ENSHGLG00000006585YTHDF19670.294Heterocephalus_glaber_female
ENSORLG00020000307ythdf19570.377ENSHGLG00100004683YTHDF19670.294Heterocephalus_glaber_male
ENSORLG00020000307ythdf19975.441ENSHCOG00000011303YTHDF19975.884Hippocampus_comes
ENSORLG00020000307ythdf19784.833ENSHCOG00000008866ythdf19784.014Hippocampus_comes
ENSORLG00020000307ythdf19978.444ENSIPUG00000000425Ythdf19977.706Ictalurus_punctatus
ENSORLG00020000307ythdf19469.512ENSSTOG00000023001YTHDF19670.702Ictidomys_tridecemlineatus
ENSORLG00020000307ythdf19470.804ENSJJAG00000013589Ythdf19670.775Jaculus_jaculus
ENSORLG00020000307ythdf19976.167ENSKMAG00000017472YTHDF19976.849Kryptolebias_marmoratus
ENSORLG00020000307ythdf110088.399ENSKMAG00000005595ythdf110088.399Kryptolebias_marmoratus
ENSORLG00020000307ythdf110089.593ENSLBEG00000014105ythdf110090.569Labrus_bergylta
ENSORLG00020000307ythdf19974.684ENSLBEG00000012068YTHDF19976.282Labrus_bergylta
ENSORLG00020000307ythdf19371.201ENSLACG00000014195YTHDF19572.072Latimeria_chalumnae
ENSORLG00020000307ythdf19972.951ENSLOCG00000005020ythdf19973.476Lepisosteus_oculatus
ENSORLG00020000307ythdf19570.619ENSLAFG00000008884YTHDF19670.069Loxodonta_africana
ENSORLG00020000307ythdf19570.548ENSMFAG00000042868YTHDF19670.934Macaca_fascicularis
ENSORLG00020000307ythdf19570.548ENSMMUG00000009227YTHDF19670.934Macaca_mulatta
ENSORLG00020000307ythdf19570.548ENSMNEG00000030851YTHDF19670.934Macaca_nemestrina
ENSORLG00020000307ythdf19570.890ENSMLEG00000009252YTHDF19670.951Mandrillus_leucophaeus
ENSORLG00020000307ythdf110087.928ENSMAMG00000024255ythdf110088.091Mastacembelus_armatus
ENSORLG00020000307ythdf19976.274ENSMAMG00000011072YTHDF19976.077Mastacembelus_armatus
ENSORLG00020000307ythdf110089.723ENSMZEG00005026397ythdf110090.049Maylandia_zebra
ENSORLG00020000307ythdf19976.726ENSMZEG00005023596YTHDF19977.492Maylandia_zebra
ENSORLG00020000307ythdf19570.962ENSMGAG00000006139YTHDF19670.660Meleagris_gallopavo
ENSORLG00020000307ythdf19571.134ENSMAUG00000017660Ythdf19670.242Mesocricetus_auratus
ENSORLG00020000307ythdf19569.931ENSMICG00000032266YTHDF19669.723Microcebus_murinus
ENSORLG00020000307ythdf19571.134ENSMOCG00000013573Ythdf19670.242Microtus_ochrogaster
ENSORLG00020000307ythdf19584.486ENSMMOG00000017500ythdf19585.185Mola_mola
ENSORLG00020000307ythdf19974.880ENSMMOG00000020467YTHDF19975.161Mola_mola
ENSORLG00020000307ythdf18672.243ENSMODG00000016842YTHDF19672.222Monodelphis_domestica
ENSORLG00020000307ythdf110087.419ENSMALG00000015672ythdf110088.387Monopterus_albus
ENSORLG00020000307ythdf19975.362ENSMALG00000022209YTHDF19975.968Monopterus_albus
ENSORLG00020000307ythdf19570.548MGP_CAROLIEiJ_G0024790Ythdf19670.588Mus_caroli
ENSORLG00020000307ythdf19570.548ENSMUSG00000038848Ythdf19670.588Mus_musculus
ENSORLG00020000307ythdf19570.548MGP_PahariEiJ_G0026237Ythdf19670.588Mus_pahari
ENSORLG00020000307ythdf19570.548MGP_SPRETEiJ_G0025715Ythdf19670.588Mus_spretus
ENSORLG00020000307ythdf18667.045ENSMPUG00000008111YTHDF19669.349Mustela_putorius_furo
ENSORLG00020000307ythdf19271.658ENSMLUG00000002241YTHDF19371.095Myotis_lucifugus
ENSORLG00020000307ythdf19570.377ENSNGAG00000000334Ythdf19671.107Nannospalax_galili
ENSORLG00020000307ythdf19577.273ENSNBRG00000015321YTHDF19778.078Neolamprologus_brichardi
ENSORLG00020000307ythdf19588.718ENSNBRG00000008213ythdf19689.402Neolamprologus_brichardi
ENSORLG00020000307ythdf19265.412ENSOPRG00000001758-9865.225Ochotona_princeps
ENSORLG00020000307ythdf19558.103ENSODEG00000000074-9559.343Octodon_degus
ENSORLG00020000307ythdf19569.178ENSODEG00000004380-9670.242Octodon_degus
ENSORLG00020000307ythdf19587.822ENSONIG00000016799ythdf19990.248Oreochromis_niloticus
ENSORLG00020000307ythdf19572.260ENSOANG00000003723YTHDF19671.626Ornithorhynchus_anatinus
ENSORLG00020000307ythdf110099.344ENSORLG00000014665YTHDF110099.344Oryzias_latipes
ENSORLG00020000307ythdf19974.092ENSORLG00000009739YTHDF19975.806Oryzias_latipes
ENSORLG00020000307ythdf19973.776ENSORLG00015018321YTHDF19975.484Oryzias_latipes_hsok
ENSORLG00020000307ythdf110099.836ENSORLG00015006302ythdf110099.836Oryzias_latipes_hsok
ENSORLG00020000307ythdf110097.701ENSOMEG00000002941YTHDF110097.701Oryzias_melastigma
ENSORLG00020000307ythdf19974.437ENSOMEG00000011843YTHDF19976.129Oryzias_melastigma
ENSORLG00020000307ythdf19569.072ENSOGAG00000000480YTHDF19670.242Otolemur_garnettii
ENSORLG00020000307ythdf19366.608ENSOARG00000011639YTHDF19467.368Ovis_aries
ENSORLG00020000307ythdf19571.062ENSPPAG00000023277YTHDF19670.526Pan_paniscus
ENSORLG00020000307ythdf17779.372ENSPTIG00000017355YTHDF19666.784Panthera_tigris_altaica
ENSORLG00020000307ythdf19571.062ENSPTRG00000013730YTHDF19670.588Pan_troglodytes
ENSORLG00020000307ythdf19570.548ENSPANG00000021472YTHDF19670.934Papio_anubis
ENSORLG00020000307ythdf19771.812ENSPKIG00000005026YTHDF19671.698Paramormyrops_kingsleyae
ENSORLG00020000307ythdf19572.089ENSPSIG00000005529YTHDF19571.579Pelodiscus_sinensis
ENSORLG00020000307ythdf19286.146ENSPMGG00000015328ythdf19686.501Periophthalmus_magnuspinnatus
ENSORLG00020000307ythdf19178.596ENSPMGG00000009101YTHDF19678.910Periophthalmus_magnuspinnatus
ENSORLG00020000307ythdf19372.281ENSPEMG00000020199Ythdf19671.712Peromyscus_maniculatus_bairdii
ENSORLG00020000307ythdf19772.542ENSPCIG00000017170YTHDF19672.222Phascolarctos_cinereus
ENSORLG00020000307ythdf110087.234ENSPFOG00000005405ythdf110088.380Poecilia_formosa
ENSORLG00020000307ythdf19974.250ENSPLAG00000006298YTHDF19976.442Poecilia_latipinna
ENSORLG00020000307ythdf110087.234ENSPLAG00000006653ythdf110088.380Poecilia_latipinna
ENSORLG00020000307ythdf19974.250ENSPMEG00000020969-9976.442Poecilia_mexicana
ENSORLG00020000307ythdf110086.601ENSPMEG00000023753ythdf110088.399Poecilia_mexicana
ENSORLG00020000307ythdf110087.725ENSPREG00000002173ythdf110088.871Poecilia_reticulata
ENSORLG00020000307ythdf19674.551ENSPREG00000017662YTHDF19876.821Poecilia_reticulata
ENSORLG00020000307ythdf17990.659ENSPPYG00000011226YTHDF19691.011Pongo_abelii
ENSORLG00020000307ythdf18768.491ENSPCAG00000002452YTHDF19868.182Procavia_capensis
ENSORLG00020000307ythdf19570.275ENSPCOG00000025969YTHDF19670.242Propithecus_coquereli
ENSORLG00020000307ythdf19665.136ENSPVAG00000017568YTHDF19765.972Pteropus_vampyrus
ENSORLG00020000307ythdf19976.726ENSPNYG00000002266YTHDF19977.492Pundamilia_nyererei
ENSORLG00020000307ythdf19989.655ENSPNYG00000014007ythdf19889.577Pundamilia_nyererei
ENSORLG00020000307ythdf19980.488ENSPNAG00000012447ythdf19981.789Pygocentrus_nattereri
ENSORLG00020000307ythdf19570.377ENSRNOG00000027015Ythdf19670.415Rattus_norvegicus
ENSORLG00020000307ythdf19570.034ENSRBIG00000044959YTHDF19670.415Rhinopithecus_bieti
ENSORLG00020000307ythdf19570.034ENSRROG00000033014YTHDF19670.415Rhinopithecus_roxellana
ENSORLG00020000307ythdf19269.982ENSSBOG00000027278YTHDF19669.407Saimiri_boliviensis_boliviensis
ENSORLG00020000307ythdf19472.203ENSSHAG00000010430YTHDF18572.183Sarcophilus_harrisii
ENSORLG00020000307ythdf19973.453ENSSFOG00015000284ythdf19975.163Scleropages_formosus
ENSORLG00020000307ythdf19381.759ENSSMAG00000007635YTHDF19876.393Scophthalmus_maximus
ENSORLG00020000307ythdf16994.904ENSSMAG00000013715ythdf19389.098Scophthalmus_maximus
ENSORLG00020000307ythdf19973.292ENSSDUG00000015823YTHDF19974.259Seriola_dumerili
ENSORLG00020000307ythdf110089.176ENSSDUG00000000435ythdf110090.468Seriola_dumerili
ENSORLG00020000307ythdf17894.972ENSSLDG00000001054YTHDF19195.480Seriola_lalandi_dorsalis
ENSORLG00020000307ythdf19989.286ENSSLDG00000024948ythdf19990.438Seriola_lalandi_dorsalis
ENSORLG00020000307ythdf18671.402ENSSPUG00000015143YTHDF19671.648Sphenodon_punctatus
ENSORLG00020000307ythdf19974.603ENSSPAG00000003666YTHDF19975.840Stegastes_partitus
ENSORLG00020000307ythdf110088.800ENSSPAG00000014989ythdf110089.600Stegastes_partitus
ENSORLG00020000307ythdf19471.875ENSTGUG00000007565YTHDF19671.404Taeniopygia_guttata
ENSORLG00020000307ythdf19587.863ENSTRUG00000004288ythdf19786.838Takifugu_rubripes
ENSORLG00020000307ythdf19574.295ENSTRUG00000005049YTHDF19776.134Takifugu_rubripes
ENSORLG00020000307ythdf19579.346ENSTNIG00000012490ythdf19679.690Tetraodon_nigroviridis
ENSORLG00020000307ythdf19573.966ENSTNIG00000003975YTHDF19673.310Tetraodon_nigroviridis
ENSORLG00020000307ythdf19768.074ENSTTRG00000001804YTHDF19767.993Tursiops_truncatus
ENSORLG00020000307ythdf18669.886ENSUAMG00000011021YTHDF19671.264Ursus_americanus
ENSORLG00020000307ythdf18669.697ENSUMAG00000022290YTHDF19671.073Ursus_maritimus
ENSORLG00020000307ythdf18669.886ENSVVUG00000015275YTHDF19670.498Vulpes_vulpes
ENSORLG00020000307ythdf19372.222ENSXETG00000027086ythdf19471.886Xenopus_tropicalis
ENSORLG00020000307ythdf19485.789ENSXCOG00000002490ythdf19385.664Xiphophorus_couchianus
ENSORLG00020000307ythdf19673.736ENSXCOG00000008115YTHDF19976.490Xiphophorus_couchianus
ENSORLG00020000307ythdf110087.889ENSXMAG00000008525ythdf110088.543Xiphophorus_maculatus
ENSORLG00020000307ythdf19973.817ENSXMAG00000015644YTHDF19976.480Xiphophorus_maculatus

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