EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020000341 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 7069 bases
Position: chr18:10900202-10907270
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020012135	RVT_1	PF00078.27	1.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020019213	-	393	-	ENSORLP00020012135	130 (aa)	-	-

Gene Model

Click here to download ENSORLG00020000341's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020000341's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020000341	-	77	99.000	ENSORLG00020008448	-	62	99.000
ENSORLG00020000341	-	82	89.623	ENSORLG00020014807	-	75	89.623
ENSORLG00020000341	-	68	96.629	ENSORLG00020017866	-	56	96.629
ENSORLG00020000341	-	65	73.333	ENSORLG00020022651	-	54	73.333
ENSORLG00020000341	-	76	97.980	ENSORLG00020005309	-	69	97.980
ENSORLG00020000341	-	91	67.213	ENSORLG00020021895	-	96	67.213
ENSORLG00020000341	-	77	100.000	ENSORLG00020017820	-	61	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020000341	-	72	41.414	ENSLBEG00000021860	-	64	41.414	Labrus_bergylta
ENSORLG00020000341	-	79	90.291	ENSORLG00000024721	-	71	90.291	Oryzias_latipes
ENSORLG00020000341	-	76	95.960	ENSORLG00000025417	-	66	95.960	Oryzias_latipes
ENSORLG00020000341	-	78	92.157	ENSORLG00000023269	-	64	92.157	Oryzias_latipes
ENSORLG00020000341	-	72	86.408	ENSORLG00000022176	-	65	86.408	Oryzias_latipes
ENSORLG00020000341	-	78	97.059	ENSORLG00000022894	-	56	97.059	Oryzias_latipes
ENSORLG00020000341	-	77	99.000	ENSORLG00000026838	-	60	99.000	Oryzias_latipes
ENSORLG00020000341	-	77	98.000	ENSORLG00000022972	-	66	98.000	Oryzias_latipes
ENSORLG00020000341	-	79	87.500	ENSORLG00000022721	-	59	87.500	Oryzias_latipes
ENSORLG00020000341	-	77	97.000	ENSORLG00015001036	-	58	97.000	Oryzias_latipes_hsok
ENSORLG00020000341	-	77	71.429	ENSORLG00015005894	-	58	71.429	Oryzias_latipes_hsok
ENSORLG00020000341	-	76	88.889	ENSORLG00015016137	-	74	88.889	Oryzias_latipes_hsok
ENSORLG00020000341	-	77	98.000	ENSORLG00015011500	-	51	98.000	Oryzias_latipes_hsok
ENSORLG00020000341	-	79	63.107	ENSOMEG00000014346	-	67	63.107	Oryzias_melastigma
ENSORLG00020000341	-	78	64.356	ENSOMEG00000007757	-	67	64.356	Oryzias_melastigma
ENSORLG00020000341	-	67	65.517	ENSOMEG00000022260	-	57	65.517	Oryzias_melastigma