EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00020000370 (Gene tree)
Gene ID
-
Gene Symbol
hbp1
Alias
-
Full Name
HMG-box transcription factor 1
Gene Type
protein_coding
Species
Oryzias_latipes_hni
Status
putative
Strand
Plus strand
Length
9964 bases
Position
chr6:11698546-11708509
Accession
ZDB-GENE-050522-414
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00020012677AXHPF08517.122.3e-3411
ENSORLP00020012708AXHPF08517.122.4e-3411
ENSORLP00020029613AXHPF08517.122.4e-3411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00020032316-2595-ENSORLP00020012677451 (aa)--
ENSORLT00020019973-3122-ENSORLP00020029613489 (aa)--
ENSORLT00020019958-2732-ENSORLP00020012708489 (aa)--
Gene Model
Click here to download ENSORLG00020000370's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020000370's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00020000370hbp19958.798ENSORLG00020004269-9258.369
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00020000370hbp19961.350ENSG00000105856HBP19772.483Homo_sapiens
ENSORLG00020000370hbp19992.889ENSAPOG00000015816hbp110092.683Acanthochromis_polyacanthus
ENSORLG00020000370hbp19962.090ENSAMEG00000013492HBP19459.754Ailuropoda_melanoleuca
ENSORLG00020000370hbp19958.785ENSACIG00000019093-9656.394Amphilophus_citrinellus
ENSORLG00020000370hbp19890.991ENSACIG00000018873hbp19190.991Amphilophus_citrinellus
ENSORLG00020000370hbp19960.934ENSAOCG00000001429-9259.873Amphiprion_ocellaris
ENSORLG00020000370hbp19992.222ENSAOCG00000010889hbp110092.018Amphiprion_ocellaris
ENSORLG00020000370hbp19992.000ENSAPEG00000002330hbp110091.796Amphiprion_percula
ENSORLG00020000370hbp19960.554ENSAPEG00000022589-9259.488Amphiprion_percula
ENSORLG00020000370hbp19991.796ENSATEG00000016411hbp110091.593Anabas_testudineus
ENSORLG00020000370hbp19860.086ENSATEG00000003902-9759.362Anabas_testudineus
ENSORLG00020000370hbp19963.765ENSAPLG00000007110HBP19563.821Anas_platyrhynchos
ENSORLG00020000370hbp19960.362ENSACAG00000015023HBP19458.859Anolis_carolinensis
ENSORLG00020000370hbp19961.554ENSANAG00000022302HBP18773.171Aotus_nancymaae
ENSORLG00020000370hbp19991.778ENSACLG00000004758hbp19591.574Astatotilapia_calliptera
ENSORLG00020000370hbp19960.776ENSACLG00000003606HBP19259.483Astatotilapia_calliptera
ENSORLG00020000370hbp19974.090ENSAMXG00000017678hbp19375.214Astyanax_mexicanus
ENSORLG00020000370hbp19961.602ENSBTAG00000005524HBP19359.877Bos_taurus
ENSORLG00020000370hbp19961.759ENSCJAG00000016260HBP18773.171Callithrix_jacchus
ENSORLG00020000370hbp19962.218ENSCAFG00000003939HBP19359.465Canis_familiaris
ENSORLG00020000370hbp19962.218ENSCAFG00020023119HBP19359.465Canis_lupus_dingo
ENSORLG00020000370hbp19961.191ENSCHIG00000024405HBP19559.465Capra_hircus
ENSORLG00020000370hbp19961.224ENSTSYG00000010057HBP19560.408Carlito_syrichta
ENSORLG00020000370hbp19961.475ENSCAPG00000017460HBP19459.548Cavia_aperea
ENSORLG00020000370hbp19961.885ENSCPOG00000002375HBP19359.959Cavia_porcellus
ENSORLG00020000370hbp19961.554ENSCCAG00000026359HBP18773.171Cebus_capucinus
ENSORLG00020000370hbp19961.350ENSCATG00000021910HBP19559.426Cercocebus_atys
ENSORLG00020000370hbp19961.963ENSCLAG00000005170HBP19559.836Chinchilla_lanigera
ENSORLG00020000370hbp19961.350ENSCSAG00000011395HBP19359.426Chlorocebus_sabaeus
ENSORLG00020000370hbp16894.118ENSCHOG00000006820HBP16494.118Choloepus_hoffmanni
ENSORLG00020000370hbp19964.431ENSCPBG00000000954HBP19263.136Chrysemys_picta_bellii
ENSORLG00020000370hbp19961.350ENSCANG00000022804HBP19559.426Colobus_angolensis_palliatus
ENSORLG00020000370hbp110060.692ENSCGRG00001014437Hbp19359.100Cricetulus_griseus_chok1gshd
ENSORLG00020000370hbp110060.692ENSCGRG00000013859Hbp19359.100Cricetulus_griseus_crigri
ENSORLG00020000370hbp19987.805ENSCSEG00000003373hbp110087.611Cynoglossus_semilaevis
ENSORLG00020000370hbp19960.044ENSCVAG00000008501-9358.734Cyprinodon_variegatus
ENSORLG00020000370hbp110090.687ENSCVAG00000008930hbp110090.687Cyprinodon_variegatus
ENSORLG00020000370hbp19974.728ENSDARG00000028517hbp19576.304Danio_rerio
ENSORLG00020000370hbp19961.350ENSDNOG00000004405HBP19059.426Dasypus_novemcinctus
ENSORLG00020000370hbp16754.985ENSDORG00000010576Hbp18952.727Dipodomys_ordii
ENSORLG00020000370hbp19953.988ENSETEG00000018542HBP19552.869Echinops_telfairi
ENSORLG00020000370hbp19844.468ENSEBUG00000016475hbp18742.915Eptatretus_burgeri
ENSORLG00020000370hbp19961.837ENSEASG00005017469HBP18659.548Equus_asinus_asinus
ENSORLG00020000370hbp19961.475ENSECAG00000020969HBP19359.754Equus_caballus
ENSORLG00020000370hbp19964.946ENSELUG00000017031-8763.034Esox_lucius
ENSORLG00020000370hbp19979.039ENSELUG00000006967hbp19977.729Esox_lucius
ENSORLG00020000370hbp19961.270ENSFCAG00000005858HBP18659.548Felis_catus
ENSORLG00020000370hbp19963.821ENSFALG00000010259HBP19263.008Ficedula_albicollis
ENSORLG00020000370hbp19961.145ENSFDAG00000007897HBP19360.532Fukomys_damarensis
ENSORLG00020000370hbp19959.740ENSFHEG00000014389-9357.511Fundulus_heteroclitus
ENSORLG00020000370hbp19990.000ENSFHEG00000008222hbp110089.800Fundulus_heteroclitus
ENSORLG00020000370hbp19982.483ENSGMOG00000013782hbp110082.301Gadus_morhua
ENSORLG00020000370hbp19963.618ENSGALG00000008050HBP19261.914Gallus_gallus
ENSORLG00020000370hbp19991.333ENSGAFG00000021976hbp110091.131Gambusia_affinis
ENSORLG00020000370hbp19961.538ENSGAFG00000004651-9260.220Gambusia_affinis
ENSORLG00020000370hbp110084.430ENSGACG00000010054hbp110084.430Gasterosteus_aculeatus
ENSORLG00020000370hbp19959.740ENSGACG00000019192-9558.351Gasterosteus_aculeatus
ENSORLG00020000370hbp19964.634ENSGAGG00000023042HBP19263.544Gopherus_agassizii
ENSORLG00020000370hbp19961.145ENSGGOG00000007788HBP18773.361Gorilla_gorilla
ENSORLG00020000370hbp19960.128ENSHBUG00000016198-9259.062Haplochromis_burtoni
ENSORLG00020000370hbp19992.000ENSHBUG00000004967hbp19591.796Haplochromis_burtoni
ENSORLG00020000370hbp19960.736ENSHGLG00000019188HBP19359.426Heterocephalus_glaber_female
ENSORLG00020000370hbp19960.736ENSHGLG00100001912HBP19359.426Heterocephalus_glaber_male
ENSORLG00020000370hbp19945.851ENSHGLG00100014672-9444.025Heterocephalus_glaber_male
ENSORLG00020000370hbp110082.301ENSHCOG00000011877hbp110082.301Hippocampus_comes
ENSORLG00020000370hbp19557.339ENSHCOG00000010740-8554.128Hippocampus_comes
ENSORLG00020000370hbp19975.000ENSIPUG00000023044hbp19375.267Ictalurus_punctatus
ENSORLG00020000370hbp19961.145ENSSTOG00000013846HBP19359.221Ictidomys_tridecemlineatus
ENSORLG00020000370hbp19961.350ENSJJAG00000015341Hbp19359.426Jaculus_jaculus
ENSORLG00020000370hbp19959.170ENSKMAG00000000266-9458.681Kryptolebias_marmoratus
ENSORLG00020000370hbp110090.909ENSKMAG00000003132hbp110090.909Kryptolebias_marmoratus
ENSORLG00020000370hbp19958.495ENSLBEG00000023959-9358.836Labrus_bergylta
ENSORLG00020000370hbp19989.135ENSLBEG00000012078hbp110088.938Labrus_bergylta
ENSORLG00020000370hbp19963.673ENSLACG00000009119HBP19261.350Latimeria_chalumnae
ENSORLG00020000370hbp19971.753ENSLOCG00000015822hbp19268.388Lepisosteus_oculatus
ENSORLG00020000370hbp19960.000ENSLAFG00000005317HBP19558.078Loxodonta_africana
ENSORLG00020000370hbp19961.350ENSMFAG00000030375HBP18873.361Macaca_fascicularis
ENSORLG00020000370hbp19961.031ENSMMUG00000015409HBP18670.833Macaca_mulatta
ENSORLG00020000370hbp19958.873ENSMNEG00000037516HBP19457.322Macaca_nemestrina
ENSORLG00020000370hbp19961.350ENSMLEG00000031993HBP19559.426Mandrillus_leucophaeus
ENSORLG00020000370hbp110090.044ENSMAMG00000023227hbp110090.044Mastacembelus_armatus
ENSORLG00020000370hbp19960.297ENSMAMG00000023588-9159.236Mastacembelus_armatus
ENSORLG00020000370hbp110090.909ENSMZEG00005005999hbp18388.323Maylandia_zebra
ENSORLG00020000370hbp19960.776ENSMZEG00005015065HBP19259.483Maylandia_zebra
ENSORLG00020000370hbp19963.618ENSMGAG00000006880HBP19361.711Meleagris_gallopavo
ENSORLG00020000370hbp19960.408ENSMAUG00000011449Hbp19358.691Mesocricetus_auratus
ENSORLG00020000370hbp19961.759ENSMICG00000012858HBP18973.469Microcebus_murinus
ENSORLG00020000370hbp19960.816ENSMOCG00000019227Hbp19359.717Microtus_ochrogaster
ENSORLG00020000370hbp19986.353ENSMMOG00000012207hbp19486.130Mola_mola
ENSORLG00020000370hbp19960.304ENSMMOG00000010239-9859.524Mola_mola
ENSORLG00020000370hbp19963.136ENSMODG00000016376HBP18460.408Monodelphis_domestica
ENSORLG00020000370hbp19957.543ENSMALG00000010834-9555.819Monopterus_albus
ENSORLG00020000370hbp19989.579ENSMALG00000009884hbp110089.381Monopterus_albus
ENSORLG00020000370hbp19961.179MGP_CAROLIEiJ_G0017683Hbp19359.184Mus_caroli
ENSORLG00020000370hbp19961.179ENSMUSG00000002996Hbp19359.184Mus_musculus
ENSORLG00020000370hbp19960.896MGP_PahariEiJ_G0029441Hbp17280.153Mus_pahari
ENSORLG00020000370hbp19961.179MGP_SPRETEiJ_G0018525Hbp19359.184Mus_spretus
ENSORLG00020000370hbp19962.090ENSMPUG00000018249HBP19359.754Mustela_putorius_furo
ENSORLG00020000370hbp19961.475ENSMLUG00000012425HBP19359.754Myotis_lucifugus
ENSORLG00020000370hbp19961.350ENSNGAG00000023485Hbp19359.426Nannospalax_galili
ENSORLG00020000370hbp19992.222ENSNBRG00000001405hbp19592.018Neolamprologus_brichardi
ENSORLG00020000370hbp19960.341ENSNBRG00000017820-9259.062Neolamprologus_brichardi
ENSORLG00020000370hbp19961.350ENSNLEG00000008761HBP18773.361Nomascus_leucogenys
ENSORLG00020000370hbp18857.859ENSMEUG00000011116HBP18454.920Notamacropus_eugenii
ENSORLG00020000370hbp16894.118ENSOPRG00000005315HBP16494.118Ochotona_princeps
ENSORLG00020000370hbp19951.940ENSODEG00000000482-9550.324Octodon_degus
ENSORLG00020000370hbp19961.145ENSODEG00000001327-9359.426Octodon_degus
ENSORLG00020000370hbp110045.011ENSODEG00000010517-9442.979Octodon_degus
ENSORLG00020000370hbp19991.778ENSONIG00000008523hbp110091.574Oreochromis_niloticus
ENSORLG00020000370hbp19958.368ENSONIG00000011868-9658.368Oreochromis_niloticus
ENSORLG00020000370hbp19962.551ENSOANG00000003174HBP19559.298Ornithorhynchus_anatinus
ENSORLG00020000370hbp19962.963ENSOCUG00000012758HBP19460.744Oryctolagus_cuniculus
ENSORLG00020000370hbp19958.369ENSORLG00000009474-9257.940Oryzias_latipes
ENSORLG00020000370hbp110099.557ENSORLG00000004396hbp110099.557Oryzias_latipes
ENSORLG00020000370hbp110099.335ENSORLG00015006557hbp110099.335Oryzias_latipes_hsok
ENSORLG00020000370hbp110097.118ENSOMEG00000012837hbp110097.118Oryzias_melastigma
ENSORLG00020000370hbp19959.524ENSOMEG00000013045-9059.477Oryzias_melastigma
ENSORLG00020000370hbp19961.759ENSOGAG00000013102HBP19561.145Otolemur_garnettii
ENSORLG00020000370hbp19960.986ENSOARG00000005055HBP19359.259Ovis_aries
ENSORLG00020000370hbp19961.350ENSPPAG00000042116HBP18773.361Pan_paniscus
ENSORLG00020000370hbp19961.270ENSPPRG00000007240HBP19559.548Panthera_pardus
ENSORLG00020000370hbp19959.221ENSPTIG00000002734HBP19557.495Panthera_tigris_altaica
ENSORLG00020000370hbp19961.350ENSPTRG00000019575HBP18773.361Pan_troglodytes
ENSORLG00020000370hbp19961.350ENSPANG00000024385HBP18873.361Papio_anubis
ENSORLG00020000370hbp19972.318ENSPKIG00000016967hbp19572.785Paramormyrops_kingsleyae
ENSORLG00020000370hbp19864.719ENSPKIG00000016269HBP19163.964Paramormyrops_kingsleyae
ENSORLG00020000370hbp19963.765ENSPSIG00000012478HBP18761.633Pelodiscus_sinensis
ENSORLG00020000370hbp19956.277ENSPMGG00000008031-9454.286Periophthalmus_magnuspinnatus
ENSORLG00020000370hbp19988.377ENSPMGG00000005789hbp19687.309Periophthalmus_magnuspinnatus
ENSORLG00020000370hbp19960.612ENSPEMG00000014801Hbp19358.896Peromyscus_maniculatus_bairdii
ENSORLG00020000370hbp19849.467ENSPMAG00000002631hbp19449.160Petromyzon_marinus
ENSORLG00020000370hbp19962.398ENSPCIG00000004275HBP18459.796Phascolarctos_cinereus
ENSORLG00020000370hbp19991.556ENSPFOG00000003951hbp110091.353Poecilia_formosa
ENSORLG00020000370hbp19961.488ENSPFOG00000012271-8960.175Poecilia_formosa
ENSORLG00020000370hbp19991.556ENSPLAG00000003142hbp110091.353Poecilia_latipinna
ENSORLG00020000370hbp19962.115ENSPLAG00000012669-9960.965Poecilia_latipinna
ENSORLG00020000370hbp19991.556ENSPMEG00000003800hbp110091.353Poecilia_mexicana
ENSORLG00020000370hbp19961.488ENSPMEG00000015095-9260.175Poecilia_mexicana
ENSORLG00020000370hbp16465.517ENSPREG00000015242-8464.948Poecilia_reticulata
ENSORLG00020000370hbp19991.111ENSPREG00000004000hbp110090.909Poecilia_reticulata
ENSORLG00020000370hbp19960.941ENSPPYG00000017898HBP19259.426Pongo_abelii
ENSORLG00020000370hbp19960.455ENSPCAG00000014060HBP19558.714Procavia_capensis
ENSORLG00020000370hbp18167.363ENSPCOG00000015370HBP18764.921Propithecus_coquereli
ENSORLG00020000370hbp19961.475ENSPVAG00000014543HBP19559.754Pteropus_vampyrus
ENSORLG00020000370hbp19960.768ENSPNYG00000015063HBP19259.488Pundamilia_nyererei
ENSORLG00020000370hbp110090.909ENSPNYG00000001079hbp19591.574Pundamilia_nyererei
ENSORLG00020000370hbp19975.375ENSPNAG00000029977hbp19376.333Pygocentrus_nattereri
ENSORLG00020000370hbp19960.941ENSRNOG00000008927Hbp19358.943Rattus_norvegicus
ENSORLG00020000370hbp19955.394ENSRBIG00000042410HBP17874.615Rhinopithecus_bieti
ENSORLG00020000370hbp19961.350ENSRROG00000036622HBP19173.361Rhinopithecus_roxellana
ENSORLG00020000370hbp19961.554ENSSBOG00000023603HBP18673.171Saimiri_boliviensis_boliviensis
ENSORLG00020000370hbp19962.398ENSSHAG00000010948HBP19359.796Sarcophilus_harrisii
ENSORLG00020000370hbp19973.474ENSSFOG00015011155hbp19473.474Scleropages_formosus
ENSORLG00020000370hbp19990.022ENSSMAG00000009892hbp110089.823Scophthalmus_maximus
ENSORLG00020000370hbp19959.110ENSSMAG00000012631-8659.023Scophthalmus_maximus
ENSORLG00020000370hbp110092.035ENSSDUG00000022273hbp110092.035Seriola_dumerili
ENSORLG00020000370hbp19960.421ENSSDUG00000015387-8959.072Seriola_dumerili
ENSORLG00020000370hbp110091.814ENSSLDG00000009669hbp110091.814Seriola_lalandi_dorsalis
ENSORLG00020000370hbp19960.000ENSSLDG00000017324-9958.898Seriola_lalandi_dorsalis
ENSORLG00020000370hbp18858.257ENSSARG00000007731HBP19455.402Sorex_araneus
ENSORLG00020000370hbp19963.951ENSSPUG00000019157HBP18963.544Sphenodon_punctatus
ENSORLG00020000370hbp19960.300ENSSPAG00000009193-9259.227Stegastes_partitus
ENSORLG00020000370hbp110092.683ENSSPAG00000004739hbp110092.683Stegastes_partitus
ENSORLG00020000370hbp19962.295ENSSSCG00000035673HBP19560.164Sus_scrofa
ENSORLG00020000370hbp19964.024ENSTGUG00000003100HBP19563.211Taeniopygia_guttata
ENSORLG00020000370hbp19953.404ENSTRUG00000011881-7952.473Takifugu_rubripes
ENSORLG00020000370hbp19989.135ENSTRUG00000016990hbp110088.938Takifugu_rubripes
ENSORLG00020000370hbp19988.914ENSTNIG00000016027hbp19988.717Tetraodon_nigroviridis
ENSORLG00020000370hbp19953.049ENSTNIG00000002023-9451.829Tetraodon_nigroviridis
ENSORLG00020000370hbp19954.037ENSTBEG00000007793HBP19451.767Tupaia_belangeri
ENSORLG00020000370hbp19962.705ENSTTRG00000006826HBP19560.370Tursiops_truncatus
ENSORLG00020000370hbp19961.807ENSUAMG00000005951HBP19359.671Ursus_americanus
ENSORLG00020000370hbp19961.807ENSUMAG00000018257HBP19359.465Ursus_maritimus
ENSORLG00020000370hbp18160.733ENSVPAG00000008629HBP19257.662Vicugna_pacos
ENSORLG00020000370hbp19962.218ENSVVUG00000022009HBP19359.465Vulpes_vulpes
ENSORLG00020000370hbp19961.100ENSXETG00000005922hbp19557.087Xenopus_tropicalis
ENSORLG00020000370hbp19991.256ENSXCOG00000020795hbp19191.256Xiphophorus_couchianus
ENSORLG00020000370hbp19990.667ENSXMAG00000016455hbp110090.466Xiphophorus_maculatus
ENSORLG00020000370hbp19961.488ENSXMAG00000007586-9260.175Xiphophorus_maculatus

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