EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020000404 (Gene tree)
Gene ID: -
Gene Symbol: safb
Alias: -
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 7693 bases
Position: chr4:29750329-29758021
Accession: ZDB-GENE-030131-698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020030416	RRM_1	PF00076.22	1e-13	1	1
ENSORLP00020030416	SAP	PF02037.27	2.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020021512	-	2172	-	ENSORLP00020030416	723 (aa)	-	-

Gene Model

Click here to download ENSORLG00020000404's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020000404's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020000404	safb	98	39.326	ENSG00000160633	SAFB	94	40.662	Homo_sapiens
ENSORLG00020000404	safb	100	67.947	ENSAPOG00000022508	safb	66	71.014	Acanthochromis_polyacanthus
ENSORLG00020000404	safb	68	39.209	ENSAMEG00000012254	SAFB	95	40.805	Ailuropoda_melanoleuca
ENSORLG00020000404	safb	98	72.114	ENSACIG00000006247	safb	98	72.207	Amphilophus_citrinellus
ENSORLG00020000404	safb	100	71.447	ENSAOCG00000006308	safb	98	71.673	Amphiprion_ocellaris
ENSORLG00020000404	safb	100	67.266	ENSAPEG00000023342	safb	67	69.620	Amphiprion_percula
ENSORLG00020000404	safb	100	66.389	ENSATEG00000004998	safb	98	67.683	Anabas_testudineus
ENSORLG00020000404	safb	60	42.884	ENSAPLG00000006355	-	99	44.364	Anas_platyrhynchos
ENSORLG00020000404	safb	61	39.107	ENSAPLG00000005780	-	97	41.677	Anas_platyrhynchos
ENSORLG00020000404	safb	98	40.114	ENSANAG00000028821	SAFB	94	43.049	Aotus_nancymaae
ENSORLG00020000404	safb	100	67.159	ENSACLG00000001926	safb	65	69.737	Astatotilapia_calliptera
ENSORLG00020000404	safb	96	54.885	ENSAMXG00000018154	safb	96	56.695	Astyanax_mexicanus
ENSORLG00020000404	safb	98	39.043	ENSBTAG00000007875	SAFB	95	41.040	Bos_taurus
ENSORLG00020000404	safb	68	39.539	ENSCAFG00000018803	SAFB	81	41.551	Canis_familiaris
ENSORLG00020000404	safb	68	39.374	ENSCAFG00020018943	SAFB	94	40.506	Canis_lupus_dingo
ENSORLG00020000404	safb	60	47.004	ENSCHIG00000007262	SAFB	95	41.647	Capra_hircus
ENSORLG00020000404	safb	51	56.148	ENSCPOG00000026322	SAFB	77	50.192	Cavia_porcellus
ENSORLG00020000404	safb	70	42.133	ENSCCAG00000020193	SAFB	94	43.293	Cebus_capucinus
ENSORLG00020000404	safb	98	39.326	ENSCATG00000029994	SAFB	94	43.032	Cercocebus_atys
ENSORLG00020000404	safb	66	38.625	ENSCLAG00000007734	SAFB	94	40.883	Chinchilla_lanigera
ENSORLG00020000404	safb	98	39.326	ENSCSAG00000009949	SAFB	94	39.909	Chlorocebus_sabaeus
ENSORLG00020000404	safb	60	30.866	ENSCHOG00000003208	SAFB	87	36.111	Choloepus_hoffmanni
ENSORLG00020000404	safb	87	40.920	ENSCPBG00000010936	-	91	43.052	Chrysemys_picta_bellii
ENSORLG00020000404	safb	89	42.034	ENSCPBG00000010928	-	92	43.726	Chrysemys_picta_bellii
ENSORLG00020000404	safb	97	41.274	ENSCANG00000019754	-	90	39.882	Colobus_angolensis_palliatus
ENSORLG00020000404	safb	98	37.437	ENSCANG00000004774	-	93	35.344	Colobus_angolensis_palliatus
ENSORLG00020000404	safb	52	54.472	ENSCGRG00001002254	Safb	78	48.767	Cricetulus_griseus_chok1gshd
ENSORLG00020000404	safb	99	72.541	ENSCSEG00000019870	safb	98	73.352	Cynoglossus_semilaevis
ENSORLG00020000404	safb	100	63.085	ENSCVAG00000002226	safb	98	62.953	Cyprinodon_variegatus
ENSORLG00020000404	safb	95	51.741	ENSDARG00000020467	safb	96	50.120	Danio_rerio
ENSORLG00020000404	safb	70	38.730	ENSDNOG00000015746	SAFB	96	39.521	Dasypus_novemcinctus
ENSORLG00020000404	safb	51	54.694	ENSDORG00000016200	Safb	78	42.745	Dipodomys_ordii
ENSORLG00020000404	safb	99	55.529	ENSELUG00000022327	safb	99	54.907	Esox_lucius
ENSORLG00020000404	safb	68	40.328	ENSFCAG00000011835	SAFB	94	40.460	Felis_catus
ENSORLG00020000404	safb	66	41.472	ENSFALG00000013882	-	87	42.824	Ficedula_albicollis
ENSORLG00020000404	safb	55	41.075	ENSFALG00000013881	-	92	44.059	Ficedula_albicollis
ENSORLG00020000404	safb	78	41.775	ENSFDAG00000020306	SAFB	75	39.080	Fukomys_damarensis
ENSORLG00020000404	safb	100	62.797	ENSFHEG00000004219	safb	98	64.194	Fundulus_heteroclitus
ENSORLG00020000404	safb	100	61.425	ENSGMOG00000014280	safb	98	62.516	Gadus_morhua
ENSORLG00020000404	safb	68	41.749	ENSGALG00000013365	-	96	42.712	Gallus_gallus
ENSORLG00020000404	safb	83	42.581	ENSGALG00000001948	-	95	44.614	Gallus_gallus
ENSORLG00020000404	safb	100	61.585	ENSGAFG00000016162	safb	98	61.423	Gambusia_affinis
ENSORLG00020000404	safb	100	63.325	ENSGACG00000011385	safb	67	65.310	Gasterosteus_aculeatus
ENSORLG00020000404	safb	68	50.337	ENSGAGG00000017702	-	87	53.091	Gopherus_agassizii
ENSORLG00020000404	safb	93	43.722	ENSGAGG00000008424	-	97	44.457	Gopherus_agassizii
ENSORLG00020000404	safb	98	39.438	ENSGGOG00000015109	SAFB	94	41.312	Gorilla_gorilla
ENSORLG00020000404	safb	100	74.899	ENSHBUG00000009218	safb	98	75.207	Haplochromis_burtoni
ENSORLG00020000404	safb	51	55.738	ENSHGLG00000015883	SAFB	94	40.455	Heterocephalus_glaber_female
ENSORLG00020000404	safb	60	40.079	ENSHGLG00100004228	SAFB	51	41.372	Heterocephalus_glaber_male
ENSORLG00020000404	safb	93	56.806	ENSHCOG00000001705	safb	65	58.367	Hippocampus_comes
ENSORLG00020000404	safb	100	53.209	ENSIPUG00000024869	safb2	98	55.702	Ictalurus_punctatus
ENSORLG00020000404	safb	60	36.796	ENSSTOG00000002783	SAFB	97	39.197	Ictidomys_tridecemlineatus
ENSORLG00020000404	safb	100	66.947	ENSKMAG00000022308	safb	98	68.673	Kryptolebias_marmoratus
ENSORLG00020000404	safb	100	65.371	ENSLBEG00000006015	safb	66	68.280	Labrus_bergylta
ENSORLG00020000404	safb	67	41.137	ENSLACG00000018090	SAFB	97	44.432	Latimeria_chalumnae
ENSORLG00020000404	safb	98	53.372	ENSLOCG00000003613	safb	98	52.019	Lepisosteus_oculatus
ENSORLG00020000404	safb	98	39.527	ENSLAFG00000003840	SAFB	95	40.888	Loxodonta_africana
ENSORLG00020000404	safb	70	41.754	ENSMFAG00000003885	SAFB	94	43.032	Macaca_fascicularis
ENSORLG00020000404	safb	98	40.136	ENSMMUG00000017970	SAFB	94	43.032	Macaca_mulatta
ENSORLG00020000404	safb	98	40.799	ENSMNEG00000035637	SAFB	94	41.760	Macaca_nemestrina
ENSORLG00020000404	safb	70	36.554	ENSMLEG00000038637	SAFB	94	39.055	Mandrillus_leucophaeus
ENSORLG00020000404	safb	100	66.746	ENSMAMG00000003357	safb	90	67.439	Mastacembelus_armatus
ENSORLG00020000404	safb	100	67.159	ENSMZEG00005009120	safb	67	68.262	Maylandia_zebra
ENSORLG00020000404	safb	63	39.649	ENSMGAG00000001101	-	95	41.863	Meleagris_gallopavo
ENSORLG00020000404	safb	65	43.243	ENSMGAG00000001051	-	96	45.271	Meleagris_gallopavo
ENSORLG00020000404	safb	84	37.581	ENSMICG00000046795	-	67	65.217	Microcebus_murinus
ENSORLG00020000404	safb	70	42.832	ENSMICG00000008739	-	95	38.662	Microcebus_murinus
ENSORLG00020000404	safb	51	54.472	ENSMOCG00000014040	Safb	78	48.767	Microtus_ochrogaster
ENSORLG00020000404	safb	69	40.665	ENSMODG00000001236	SAFB	94	41.270	Monodelphis_domestica
ENSORLG00020000404	safb	100	64.976	ENSMALG00000020330	safb	99	66.169	Monopterus_albus
ENSORLG00020000404	safb	50	54.393	MGP_PahariEiJ_G0020769	Safb	77	48.362	Mus_pahari
ENSORLG00020000404	safb	98	39.410	ENSMLUG00000001081	SAFB	94	39.909	Myotis_lucifugus
ENSORLG00020000404	safb	97	39.435	ENSNLEG00000013551	SAFB	95	40.632	Nomascus_leucogenys
ENSORLG00020000404	safb	51	56.612	ENSODEG00000014838	SAFB	94	40.930	Octodon_degus
ENSORLG00020000404	safb	100	66.468	ENSONIG00000002318	safb	67	69.231	Oreochromis_niloticus
ENSORLG00020000404	safb	87	37.918	ENSOCUG00000014628	SAFB	85	39.764	Oryctolagus_cuniculus
ENSORLG00020000404	safb	100	88.243	ENSORLG00000016989	safb	100	88.243	Oryzias_latipes
ENSORLG00020000404	safb	100	87.376	ENSORLG00015010733	safb	98	87.089	Oryzias_latipes_hsok
ENSORLG00020000404	safb	100	79.459	ENSOMEG00000009066	safb	98	81.132	Oryzias_melastigma
ENSORLG00020000404	safb	66	39.898	ENSOGAG00000027769	SAFB	94	39.908	Otolemur_garnettii
ENSORLG00020000404	safb	60	42.935	ENSOARG00000007662	-	95	38.273	Ovis_aries
ENSORLG00020000404	safb	70	41.754	ENSPPAG00000035129	SAFB	94	40.409	Pan_paniscus
ENSORLG00020000404	safb	68	40.328	ENSPPRG00000017197	SAFB	94	40.460	Panthera_pardus
ENSORLG00020000404	safb	70	41.754	ENSPTRG00000010335	SAFB	94	40.068	Pan_troglodytes
ENSORLG00020000404	safb	70	38.270	ENSPANG00000007770	SAFB	94	43.032	Papio_anubis
ENSORLG00020000404	safb	99	53.272	ENSPKIG00000009902	safb	98	52.787	Paramormyrops_kingsleyae
ENSORLG00020000404	safb	98	41.309	ENSPSIG00000009367	-	94	43.679	Pelodiscus_sinensis
ENSORLG00020000404	safb	93	41.395	ENSPSIG00000011679	-	96	43.566	Pelodiscus_sinensis
ENSORLG00020000404	safb	51	54.472	ENSPEMG00000020428	Safb	78	49.234	Peromyscus_maniculatus_bairdii
ENSORLG00020000404	safb	100	64.484	ENSPFOG00000007745	safb	98	64.774	Poecilia_formosa
ENSORLG00020000404	safb	100	61.325	ENSPLAG00000001614	safb	98	61.776	Poecilia_latipinna
ENSORLG00020000404	safb	100	64.232	ENSPMEG00000021023	safb	99	64.133	Poecilia_mexicana
ENSORLG00020000404	safb	100	62.794	ENSPREG00000012496	safb	98	63.038	Poecilia_reticulata
ENSORLG00020000404	safb	98	39.302	ENSPPYG00000009428	SAFB	94	40.438	Pongo_abelii
ENSORLG00020000404	safb	90	38.480	ENSPCAG00000006475	SAFB	94	37.500	Procavia_capensis
ENSORLG00020000404	safb	95	39.763	ENSPCOG00000014090	SAFB	94	39.906	Propithecus_coquereli
ENSORLG00020000404	safb	69	48.598	ENSPVAG00000004913	SAFB	69	48.598	Pteropus_vampyrus
ENSORLG00020000404	safb	99	55.530	ENSPNAG00000021838	safb	97	56.699	Pygocentrus_nattereri
ENSORLG00020000404	safb	51	54.472	ENSRNOG00000050543	Safb	79	48.197	Rattus_norvegicus
ENSORLG00020000404	safb	70	40.909	ENSRBIG00000042509	SAFB	94	42.217	Rhinopithecus_bieti
ENSORLG00020000404	safb	70	41.930	ENSRROG00000029278	SAFB	94	42.910	Rhinopithecus_roxellana
ENSORLG00020000404	safb	98	40.114	ENSSBOG00000026291	SAFB	94	43.293	Saimiri_boliviensis_boliviensis
ENSORLG00020000404	safb	99	52.535	ENSSFOG00015008156	safb	97	52.934	Scleropages_formosus
ENSORLG00020000404	safb	100	66.825	ENSSMAG00000009316	safb	67	68.941	Scophthalmus_maximus
ENSORLG00020000404	safb	100	72.280	ENSSDUG00000009652	safb	98	72.510	Seriola_dumerili
ENSORLG00020000404	safb	100	68.421	ENSSLDG00000001670	safb	66	70.886	Seriola_lalandi_dorsalis
ENSORLG00020000404	safb	60	38.710	ENSSARG00000010475	SAFB	97	39.832	Sorex_araneus
ENSORLG00020000404	safb	58	37.380	ENSSPUG00000009747	-	97	38.119	Sphenodon_punctatus
ENSORLG00020000404	safb	100	71.671	ENSSPAG00000015682	safb	98	72.021	Stegastes_partitus
ENSORLG00020000404	safb	57	44.190	ENSSSCG00000013522	SAFB	96	41.974	Sus_scrofa
ENSORLG00020000404	safb	65	42.664	ENSTGUG00000000489	-	96	45.799	Taeniopygia_guttata
ENSORLG00020000404	safb	66	41.472	ENSTGUG00000000502	-	97	42.610	Taeniopygia_guttata
ENSORLG00020000404	safb	100	64.140	ENSTRUG00000003567	safb	98	61.255	Takifugu_rubripes
ENSORLG00020000404	safb	68	66.555	ENSTNIG00000015470	safb	76	66.054	Tetraodon_nigroviridis
ENSORLG00020000404	safb	65	75.000	ENSTTRG00000013588	SAFB	61	75.000	Tursiops_truncatus
ENSORLG00020000404	safb	69	39.274	ENSUMAG00000009734	SAFB	85	40.204	Ursus_maritimus
ENSORLG00020000404	safb	68	39.539	ENSVVUG00000013720	SAFB	81	41.339	Vulpes_vulpes
ENSORLG00020000404	safb	65	40.877	ENSXETG00000008755	safb	96	42.910	Xenopus_tropicalis
ENSORLG00020000404	safb	100	64.232	ENSXMAG00000003458	safb	98	64.645	Xiphophorus_maculatus