EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020000533 (Gene tree)
Gene ID: -
Gene Symbol: polr1d
Alias: -
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 11574 bases
Position: chr10:25164478-25176051
Accession: ZDB-GENE-040930-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020017507	RNA_pol_L_2	PF13656.6	1e-29	1	1
ENSORLP00020017480	RNA_pol_L_2	PF13656.6	1.5e-29	1	1
ENSORLP00020017494	RNA_pol_L_2	PF13656.6	2.3e-29	1	1
ENSORLP00020017507	RNA_pol_L	PF01193.24	2.7e-12	1	1
ENSORLP00020017480	RNA_pol_L	PF01193.24	3.8e-12	1	1
ENSORLP00020017494	RNA_pol_L	PF01193.24	5.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020026046	-	630	-	ENSORLP00020017494	209 (aa)	-	-
ENSORLT00020026062	-	581	-	ENSORLP00020017480	169 (aa)	-	-
ENSORLT00020026050	-	2100	-	ENSORLP00020017507	148 (aa)	-	-

Gene Model

Click here to download ENSORLG00020000533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020000533's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020000533	polr1d	70	31.731	ENSORLG00020007625	polr2j	72	31.731

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020000533	polr1d	75	66.667	ENSG00000186184	POLR1D	92	68.224	Homo_sapiens
ENSORLG00020000533	polr1d	69	80.392	ENSAPOG00000021882	polr1d	100	81.132	Acanthochromis_polyacanthus
ENSORLG00020000533	polr1d	76	66.964	ENSAMEG00000019095	POLR1D	90	66.964	Ailuropoda_melanoleuca
ENSORLG00020000533	polr1d	77	81.739	ENSACIG00000013328	polr1d	100	81.739	Amphilophus_citrinellus
ENSORLG00020000533	polr1d	77	78.947	ENSAOCG00000018500	polr1d	100	78.947	Amphiprion_ocellaris
ENSORLG00020000533	polr1d	77	79.825	ENSAPEG00000009489	polr1d	100	79.825	Amphiprion_percula
ENSORLG00020000533	polr1d	77	82.456	ENSATEG00000019322	polr1d	100	82.456	Anabas_testudineus
ENSORLG00020000533	polr1d	73	67.593	ENSACAG00000015753	POLR1D	93	67.593	Anolis_carolinensis
ENSORLG00020000533	polr1d	75	66.667	ENSANAG00000024486	POLR1D	83	66.667	Aotus_nancymaae
ENSORLG00020000533	polr1d	77	82.456	ENSACLG00000023805	polr1d	100	82.456	Astatotilapia_calliptera
ENSORLG00020000533	polr1d	76	71.681	ENSAMXG00000036118	polr1d	98	71.681	Astyanax_mexicanus
ENSORLG00020000533	polr1d	75	69.369	ENSBTAG00000008642	POLR1D	83	69.369	Bos_taurus
ENSORLG00020000533	polr1d	75	69.369	ENSBTAG00000033252	-	83	69.369	Bos_taurus
ENSORLG00020000533	polr1d	62	36.170	WBGene00010230	rpac-19	65	36.170	Caenorhabditis_elegans
ENSORLG00020000533	polr1d	75	67.568	ENSCJAG00000044669	POLR1D	83	67.568	Callithrix_jacchus
ENSORLG00020000533	polr1d	75	67.568	ENSCAFG00000006755	POLR1D	83	67.568	Canis_familiaris
ENSORLG00020000533	polr1d	75	67.568	ENSCHIG00000021910	POLR1D	83	67.568	Capra_hircus
ENSORLG00020000533	polr1d	76	66.964	ENSTSYG00000026817	-	84	66.964	Carlito_syrichta
ENSORLG00020000533	polr1d	71	58.879	ENSTSYG00000034852	-	88	58.879	Carlito_syrichta
ENSORLG00020000533	polr1d	75	66.667	ENSCCAG00000021349	-	83	66.667	Cebus_capucinus
ENSORLG00020000533	polr1d	76	51.786	ENSCCAG00000020191	-	82	51.786	Cebus_capucinus
ENSORLG00020000533	polr1d	75	56.757	ENSCATG00000022900	-	83	56.757	Cercocebus_atys
ENSORLG00020000533	polr1d	75	66.667	ENSCATG00000030710	-	83	66.667	Cercocebus_atys
ENSORLG00020000533	polr1d	76	67.857	ENSCLAG00000017623	POLR1D	90	67.857	Chinchilla_lanigera
ENSORLG00020000533	polr1d	68	70.297	ENSCPBG00000004719	POLR1D	99	72.000	Chrysemys_picta_bellii
ENSORLG00020000533	polr1d	75	66.667	ENSCANG00000028632	-	83	66.667	Colobus_angolensis_palliatus
ENSORLG00020000533	polr1d	75	65.766	ENSCANG00000037694	-	83	65.766	Colobus_angolensis_palliatus
ENSORLG00020000533	polr1d	75	67.568	ENSCGRG00001021251	Polr1d	83	67.568	Cricetulus_griseus_chok1gshd
ENSORLG00020000533	polr1d	75	67.568	ENSCGRG00000011639	Polr1d	83	67.568	Cricetulus_griseus_crigri
ENSORLG00020000533	polr1d	72	79.245	ENSCSEG00000018268	polr1d	100	75.214	Cynoglossus_semilaevis
ENSORLG00020000533	polr1d	77	84.211	ENSCVAG00000018527	polr1d	100	84.211	Cyprinodon_variegatus
ENSORLG00020000533	polr1d	74	70.000	ENSDARG00000037570	polr1d	97	70.000	Danio_rerio
ENSORLG00020000533	polr1d	79	63.248	ENSDNOG00000043676	-	88	63.248	Dasypus_novemcinctus
ENSORLG00020000533	polr1d	79	62.393	ENSDNOG00000046247	-	87	62.393	Dasypus_novemcinctus
ENSORLG00020000533	polr1d	74	68.807	ENSDORG00000029155	Polr1d	82	68.807	Dipodomys_ordii
ENSORLG00020000533	polr1d	74	43.119	FBgn0086447	l(2)37Cg	80	48.235	Drosophila_melanogaster
ENSORLG00020000533	polr1d	75	70.270	ENSETEG00000012797	POLR1D	90	70.270	Echinops_telfairi
ENSORLG00020000533	polr1d	63	62.366	ENSEBUG00000011748	polr1d	65	62.366	Eptatretus_burgeri
ENSORLG00020000533	polr1d	77	66.667	ENSEASG00005022487	POLR1D	88	66.667	Equus_asinus_asinus
ENSORLG00020000533	polr1d	75	67.568	ENSEEUG00000013144	POLR1D	90	67.568	Erinaceus_europaeus
ENSORLG00020000533	polr1d	75	75.893	ENSELUG00000005105	rpac2	98	75.893	Esox_lucius
ENSORLG00020000533	polr1d	75	67.568	ENSFCAG00000030162	POLR1D	83	67.568	Felis_catus
ENSORLG00020000533	polr1d	68	74.000	ENSFALG00000011463	POLR1D	99	74.000	Ficedula_albicollis
ENSORLG00020000533	polr1d	75	67.568	ENSFDAG00000004463	POLR1D	83	67.568	Fukomys_damarensis
ENSORLG00020000533	polr1d	78	85.217	ENSFHEG00000015410	polr1d	100	85.217	Fundulus_heteroclitus
ENSORLG00020000533	polr1d	77	84.211	ENSGAFG00000001693	polr1d	100	84.211	Gambusia_affinis
ENSORLG00020000533	polr1d	74	81.818	ENSGACG00000018585	polr1d	93	81.818	Gasterosteus_aculeatus
ENSORLG00020000533	polr1d	77	71.930	ENSGAGG00000008503	POLR1D	100	71.930	Gopherus_agassizii
ENSORLG00020000533	polr1d	75	66.667	ENSGGOG00000004235	POLR1D	83	66.667	Gorilla_gorilla
ENSORLG00020000533	polr1d	77	82.456	ENSHBUG00000002111	polr1d	100	82.456	Haplochromis_burtoni
ENSORLG00020000533	polr1d	75	66.667	ENSHGLG00000003202	POLR1D	83	66.667	Heterocephalus_glaber_female
ENSORLG00020000533	polr1d	75	66.667	ENSHGLG00100009393	POLR1D	83	66.667	Heterocephalus_glaber_male
ENSORLG00020000533	polr1d	77	74.561	ENSHCOG00000003258	polr1d	100	74.561	Hippocampus_comes
ENSORLG00020000533	polr1d	77	73.043	ENSIPUG00000014810	polr1d	100	73.043	Ictalurus_punctatus
ENSORLG00020000533	polr1d	75	66.667	ENSSTOG00000013877	POLR1D	83	66.667	Ictidomys_tridecemlineatus
ENSORLG00020000533	polr1d	75	52.252	ENSJJAG00000021667	-	65	52.252	Jaculus_jaculus
ENSORLG00020000533	polr1d	84	60.484	ENSJJAG00000022671	-	93	66.071	Jaculus_jaculus
ENSORLG00020000533	polr1d	77	84.211	ENSKMAG00000015256	polr1d	100	84.211	Kryptolebias_marmoratus
ENSORLG00020000533	polr1d	77	81.579	ENSLBEG00000015919	polr1d	100	81.579	Labrus_bergylta
ENSORLG00020000533	polr1d	76	67.257	ENSLACG00000006810	POLR1D	93	67.257	Latimeria_chalumnae
ENSORLG00020000533	polr1d	74	67.273	ENSLAFG00000032290	POLR1D	83	67.273	Loxodonta_africana
ENSORLG00020000533	polr1d	75	66.667	ENSMFAG00000045264	POLR1D	86	66.667	Macaca_fascicularis
ENSORLG00020000533	polr1d	54	67.500	ENSMMUG00000041570	-	72	67.500	Macaca_mulatta
ENSORLG00020000533	polr1d	72	68.224	ENSMMUG00000020386	POLR1D	92	68.224	Macaca_mulatta
ENSORLG00020000533	polr1d	67	55.556	ENSMNEG00000038120	-	83	55.556	Macaca_nemestrina
ENSORLG00020000533	polr1d	75	66.667	ENSMNEG00000008630	-	83	66.667	Macaca_nemestrina
ENSORLG00020000533	polr1d	75	66.667	ENSMLEG00000041048	-	83	66.667	Mandrillus_leucophaeus
ENSORLG00020000533	polr1d	75	57.658	ENSMLEG00000032251	-	83	57.658	Mandrillus_leucophaeus
ENSORLG00020000533	polr1d	69	83.333	ENSMAMG00000014834	polr1d	93	86.000	Mastacembelus_armatus
ENSORLG00020000533	polr1d	69	81.373	ENSMZEG00005006638	polr1d	91	82.524	Maylandia_zebra
ENSORLG00020000533	polr1d	62	76.087	ENSMGAG00000005322	POLR1D	83	78.889	Meleagris_gallopavo
ENSORLG00020000533	polr1d	75	67.568	ENSMAUG00000001946	Polr1d	83	67.568	Mesocricetus_auratus
ENSORLG00020000533	polr1d	74	52.727	ENSMICG00000007349	-	82	52.727	Microcebus_murinus
ENSORLG00020000533	polr1d	75	66.667	ENSMICG00000016883	-	83	66.667	Microcebus_murinus
ENSORLG00020000533	polr1d	75	66.667	ENSMOCG00000021288	Polr1d	83	66.667	Microtus_ochrogaster
ENSORLG00020000533	polr1d	77	84.211	ENSMMOG00000009605	polr1d	100	84.211	Mola_mola
ENSORLG00020000533	polr1d	77	69.298	ENSMODG00000023881	POLR1D	100	69.298	Monodelphis_domestica
ENSORLG00020000533	polr1d	77	77.193	ENSMALG00000010652	polr1d	100	77.193	Monopterus_albus
ENSORLG00020000533	polr1d	74	66.972	MGP_CAROLIEiJ_G0028034	Polr1d	82	66.972	Mus_caroli
ENSORLG00020000533	polr1d	75	65.766	ENSMUSG00000029642	Polr1d	83	65.766	Mus_musculus
ENSORLG00020000533	polr1d	76	65.179	MGP_PahariEiJ_G0024600	Polr1d	84	65.179	Mus_pahari
ENSORLG00020000533	polr1d	75	64.865	MGP_SPRETEiJ_G0029032	Polr1d	83	64.865	Mus_spretus
ENSORLG00020000533	polr1d	75	66.667	ENSMLUG00000027169	-	83	66.667	Myotis_lucifugus
ENSORLG00020000533	polr1d	75	63.964	ENSMLUG00000004118	-	83	63.964	Myotis_lucifugus
ENSORLG00020000533	polr1d	73	69.444	ENSNGAG00000006014	Polr1d	93	69.444	Nannospalax_galili
ENSORLG00020000533	polr1d	77	82.456	ENSNBRG00000020327	polr1d	100	82.456	Neolamprologus_brichardi
ENSORLG00020000533	polr1d	75	66.667	ENSNLEG00000000358	POLR1D	83	66.667	Nomascus_leucogenys
ENSORLG00020000533	polr1d	75	68.468	ENSODEG00000005294	-	83	68.468	Octodon_degus
ENSORLG00020000533	polr1d	75	58.559	ENSODEG00000014801	-	82	58.559	Octodon_degus
ENSORLG00020000533	polr1d	72	73.585	ENSOANG00000008708	-	98	73.585	Ornithorhynchus_anatinus
ENSORLG00020000533	polr1d	76	66.071	ENSOCUG00000015706	POLR1D	69	66.071	Oryctolagus_cuniculus
ENSORLG00020000533	polr1d	77	100.000	ENSORLG00000010257	polr1d	100	100.000	Oryzias_latipes
ENSORLG00020000533	polr1d	98	88.966	ENSORLG00015013267	polr1d	96	88.966	Oryzias_latipes_hsok
ENSORLG00020000533	polr1d	87	87.121	ENSOMEG00000014912	polr1d	88	87.121	Oryzias_melastigma
ENSORLG00020000533	polr1d	79	64.957	ENSOGAG00000014601	POLR1D	88	64.957	Otolemur_garnettii
ENSORLG00020000533	polr1d	76	66.964	ENSOARG00000017005	POLR1D	86	66.964	Ovis_aries
ENSORLG00020000533	polr1d	79	64.103	ENSPPAG00000028138	POLR1D	88	64.103	Pan_paniscus
ENSORLG00020000533	polr1d	75	67.568	ENSPPRG00000003381	POLR1D	83	67.568	Panthera_pardus
ENSORLG00020000533	polr1d	76	66.964	ENSPTIG00000018137	POLR1D	84	66.964	Panthera_tigris_altaica
ENSORLG00020000533	polr1d	75	66.667	ENSPTRG00000005734	POLR1D	83	66.667	Pan_troglodytes
ENSORLG00020000533	polr1d	75	57.658	ENSPANG00000035051	-	83	57.658	Papio_anubis
ENSORLG00020000533	polr1d	75	66.667	ENSPANG00000020259	-	83	66.667	Papio_anubis
ENSORLG00020000533	polr1d	66	76.289	ENSPKIG00000021891	polr1d	98	57.724	Paramormyrops_kingsleyae
ENSORLG00020000533	polr1d	78	69.565	ENSPSIG00000011822	POLR1D	89	69.565	Pelodiscus_sinensis
ENSORLG00020000533	polr1d	78	68.103	ENSPMGG00000012998	POLR1D	85	68.103	Periophthalmus_magnuspinnatus
ENSORLG00020000533	polr1d	78	76.522	ENSPMGG00000010359	polr1d	100	76.522	Periophthalmus_magnuspinnatus
ENSORLG00020000533	polr1d	75	66.667	ENSPEMG00000006336	-	85	66.667	Peromyscus_maniculatus_bairdii
ENSORLG00020000533	polr1d	72	59.259	ENSPMAG00000004228	polr1d	91	59.259	Petromyzon_marinus
ENSORLG00020000533	polr1d	77	68.421	ENSPCIG00000001673	POLR1D	100	68.421	Phascolarctos_cinereus
ENSORLG00020000533	polr1d	77	85.088	ENSPFOG00000023343	polr1d	100	86.207	Poecilia_formosa
ENSORLG00020000533	polr1d	77	85.088	ENSPLAG00000009675	polr1d	100	85.088	Poecilia_latipinna
ENSORLG00020000533	polr1d	77	85.088	ENSPMEG00000004628	polr1d	100	85.088	Poecilia_mexicana
ENSORLG00020000533	polr1d	77	85.088	ENSPREG00000022032	polr1d	100	85.088	Poecilia_reticulata
ENSORLG00020000533	polr1d	75	65.766	ENSPCOG00000028175	POLR1D	83	65.766	Propithecus_coquereli
ENSORLG00020000533	polr1d	77	82.456	ENSPNYG00000000107	polr1d	100	82.456	Pundamilia_nyererei
ENSORLG00020000533	polr1d	74	69.725	ENSPNAG00000001512	polr1d	100	67.227	Pygocentrus_nattereri
ENSORLG00020000533	polr1d	75	66.667	ENSRBIG00000036378	-	83	66.667	Rhinopithecus_bieti
ENSORLG00020000533	polr1d	75	63.964	ENSRBIG00000000336	-	83	63.964	Rhinopithecus_bieti
ENSORLG00020000533	polr1d	75	66.667	ENSRROG00000042232	-	83	66.667	Rhinopithecus_roxellana
ENSORLG00020000533	polr1d	75	64.865	ENSRROG00000026751	-	83	64.865	Rhinopithecus_roxellana
ENSORLG00020000533	polr1d	61	53.333	YNL113W	RPC19	76	50.000	Saccharomyces_cerevisiae
ENSORLG00020000533	polr1d	75	66.667	ENSSBOG00000028482	-	83	66.667	Saimiri_boliviensis_boliviensis
ENSORLG00020000533	polr1d	70	64.423	ENSSBOG00000030146	-	76	64.423	Saimiri_boliviensis_boliviensis
ENSORLG00020000533	polr1d	76	66.071	ENSSHAG00000001190	POLR1D	87	66.071	Sarcophilus_harrisii
ENSORLG00020000533	polr1d	74	75.455	ENSSFOG00015011375	polr1d	96	75.455	Scleropages_formosus
ENSORLG00020000533	polr1d	77	83.333	ENSSMAG00000011861	polr1d	100	83.333	Scophthalmus_maximus
ENSORLG00020000533	polr1d	77	82.456	ENSSDUG00000011930	polr1d	100	82.456	Seriola_dumerili
ENSORLG00020000533	polr1d	71	79.048	ENSSLDG00000023871	polr1d	90	81.132	Seriola_lalandi_dorsalis
ENSORLG00020000533	polr1d	75	67.568	ENSSARG00000007840	POLR1D	83	67.568	Sorex_araneus
ENSORLG00020000533	polr1d	70	74.038	ENSSPUG00000005786	POLR1D	89	74.038	Sphenodon_punctatus
ENSORLG00020000533	polr1d	77	83.333	ENSSPAG00000011764	polr1d	100	83.333	Stegastes_partitus
ENSORLG00020000533	polr1d	74	67.273	ENSSSCG00000009310	POLR1D	83	67.273	Sus_scrofa
ENSORLG00020000533	polr1d	65	72.917	ENSTGUG00000005450	POLR1D	100	72.917	Taeniopygia_guttata
ENSORLG00020000533	polr1d	77	79.825	ENSTRUG00000019741	polr1d	100	79.825	Takifugu_rubripes
ENSORLG00020000533	polr1d	79	64.103	ENSTBEG00000007006	POLR1D	94	64.103	Tupaia_belangeri
ENSORLG00020000533	polr1d	75	67.568	ENSUAMG00000011413	POLR1D	83	67.568	Ursus_americanus
ENSORLG00020000533	polr1d	76	66.964	ENSUMAG00000016968	POLR1D	88	66.964	Ursus_maritimus
ENSORLG00020000533	polr1d	75	67.568	ENSVVUG00000009216	POLR1D	83	67.568	Vulpes_vulpes
ENSORLG00020000533	polr1d	68	87.129	ENSXCOG00000011731	polr1d	78	88.235	Xiphophorus_couchianus
ENSORLG00020000533	polr1d	68	86.139	ENSXMAG00000017538	polr1d	83	82.883	Xiphophorus_maculatus