EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020000548 (Gene tree)
Gene ID: -
Gene Symbol: mrpl42
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 4610 bases
Position: chr23:12569623-12574232
Accession: ZDB-GENE-101014-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020017551	MRP-S32	PF10210.9	1.9e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020026125	-	775	-	ENSORLP00020017551	145 (aa)	-	-

Gene Model

Click here to download ENSORLG00020000548's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020000548's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020000548	mrpl42	100	72.109	ENSAPOG00000010677	mrpl42	100	72.109	Acanthochromis_polyacanthus
ENSORLG00020000548	mrpl42	100	73.973	ENSAOCG00000011620	mrpl42	100	73.973	Amphiprion_ocellaris
ENSORLG00020000548	mrpl42	100	74.658	ENSAPEG00000019516	mrpl42	100	74.658	Amphiprion_percula
ENSORLG00020000548	mrpl42	90	74.242	ENSATEG00000014106	mrpl42	100	74.242	Anabas_testudineus
ENSORLG00020000548	mrpl42	68	69.697	ENSACAG00000012606	MRPL42	68	69.697	Anolis_carolinensis
ENSORLG00020000548	mrpl42	100	71.724	ENSACLG00000026856	mrpl42	100	71.724	Astatotilapia_calliptera
ENSORLG00020000548	mrpl42	66	55.670	ENSAMXG00000035149	mrpl42	71	55.670	Astyanax_mexicanus
ENSORLG00020000548	mrpl42	99	67.361	ENSCSEG00000010067	mrpl42	98	67.361	Cynoglossus_semilaevis
ENSORLG00020000548	mrpl42	100	74.830	ENSCVAG00000002612	mrpl42	100	74.830	Cyprinodon_variegatus
ENSORLG00020000548	mrpl42	100	53.425	ENSDARG00000079391	mrpl42	100	53.425	Danio_rerio
ENSORLG00020000548	mrpl42	68	45.714	ENSEBUG00000005581	mrpl42	78	45.714	Eptatretus_burgeri
ENSORLG00020000548	mrpl42	98	61.806	ENSELUG00000001973	mrpl42	97	61.806	Esox_lucius
ENSORLG00020000548	mrpl42	100	69.388	ENSFHEG00000018696	mrpl42	100	69.388	Fundulus_heteroclitus
ENSORLG00020000548	mrpl42	66	75.258	ENSGMOG00000002972	mrpl42	100	75.258	Gadus_morhua
ENSORLG00020000548	mrpl42	100	71.233	ENSGAFG00000018373	mrpl42	100	71.233	Gambusia_affinis
ENSORLG00020000548	mrpl42	66	81.250	ENSGACG00000018811	mrpl42	99	81.250	Gasterosteus_aculeatus
ENSORLG00020000548	mrpl42	100	70.345	ENSHBUG00000015960	mrpl42	100	70.345	Haplochromis_burtoni
ENSORLG00020000548	mrpl42	100	61.644	ENSHCOG00000014046	mrpl42	100	61.644	Hippocampus_comes
ENSORLG00020000548	mrpl42	68	59.596	ENSIPUG00000015395	mrpl42	67	59.596	Ictalurus_punctatus
ENSORLG00020000548	mrpl42	100	69.178	ENSKMAG00000013671	mrpl42	100	69.178	Kryptolebias_marmoratus
ENSORLG00020000548	mrpl42	100	70.548	ENSLBEG00000028618	mrpl42	99	70.548	Labrus_bergylta
ENSORLG00020000548	mrpl42	100	71.918	ENSMAMG00000009737	mrpl42	100	71.918	Mastacembelus_armatus
ENSORLG00020000548	mrpl42	100	71.724	ENSMZEG00005008545	mrpl42	96	71.724	Maylandia_zebra
ENSORLG00020000548	mrpl42	72	68.571	ENSMMOG00000002317	mrpl42	68	68.571	Mola_mola
ENSORLG00020000548	mrpl42	100	63.462	ENSMALG00000015794	mrpl42	96	63.462	Monopterus_albus
ENSORLG00020000548	mrpl42	100	70.345	ENSNBRG00000003307	mrpl42	100	70.345	Neolamprologus_brichardi
ENSORLG00020000548	mrpl42	100	70.345	ENSONIG00000011753	mrpl42	100	70.345	Oreochromis_niloticus
ENSORLG00020000548	mrpl42	77	53.982	ENSOANG00000019984	-	76	53.982	Ornithorhynchus_anatinus
ENSORLG00020000548	mrpl42	100	95.890	ENSORLG00000013500	mrpl42	85	95.890	Oryzias_latipes
ENSORLG00020000548	mrpl42	100	95.862	ENSORLG00015016984	mrpl42	100	95.862	Oryzias_latipes_hsok
ENSORLG00020000548	mrpl42	100	87.671	ENSOMEG00000010700	mrpl42	100	87.671	Oryzias_melastigma
ENSORLG00020000548	mrpl42	100	60.544	ENSPKIG00000025457	mrpl42	100	60.544	Paramormyrops_kingsleyae
ENSORLG00020000548	mrpl42	68	74.747	ENSPMGG00000019705	mrpl42	70	74.747	Periophthalmus_magnuspinnatus
ENSORLG00020000548	mrpl42	68	53.922	ENSPMAG00000008091	mrpl42	66	53.922	Petromyzon_marinus
ENSORLG00020000548	mrpl42	100	69.178	ENSPFOG00000016539	mrpl42	99	69.178	Poecilia_formosa
ENSORLG00020000548	mrpl42	100	70.548	ENSPLAG00000001255	mrpl42	100	70.548	Poecilia_latipinna
ENSORLG00020000548	mrpl42	100	69.863	ENSPMEG00000016462	mrpl42	100	69.863	Poecilia_mexicana
ENSORLG00020000548	mrpl42	92	67.910	ENSPREG00000012053	mrpl42	96	67.910	Poecilia_reticulata
ENSORLG00020000548	mrpl42	100	71.724	ENSPNYG00000009586	mrpl42	100	71.724	Pundamilia_nyererei
ENSORLG00020000548	mrpl42	68	65.657	ENSPNAG00000020753	mrpl42	68	65.657	Pygocentrus_nattereri
ENSORLG00020000548	mrpl42	100	71.918	ENSSMAG00000000262	mrpl42	100	71.918	Scophthalmus_maximus
ENSORLG00020000548	mrpl42	100	71.918	ENSSDUG00000005949	mrpl42	100	71.918	Seriola_dumerili
ENSORLG00020000548	mrpl42	100	71.233	ENSSLDG00000010159	mrpl42	100	71.233	Seriola_lalandi_dorsalis
ENSORLG00020000548	mrpl42	100	66.438	ENSTRUG00000025949	mrpl42	99	66.438	Takifugu_rubripes
ENSORLG00020000548	mrpl42	83	54.545	ENSXETG00000032902	mrpl42	97	54.545	Xenopus_tropicalis
ENSORLG00020000548	mrpl42	100	64.384	ENSXCOG00000013875	mrpl42	98	64.384	Xiphophorus_couchianus