EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020000575 (Gene tree)
Gene ID: -
Gene Symbol: mbd1b
Alias: -
Full Name: methyl-CpG binding domain protein 1b
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 18568 bases
Position: chr5:26039223-26057790
Accession: ZDB-GENE-030131-6318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020018194	MBD	PF01429.19	6.3e-12	1	1
ENSORLP00020018213	MBD	PF01429.19	6.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020026995	-	7380	-	ENSORLP00020018213	829 (aa)	-	-
ENSORLT00020034633	-	7359	-	ENSORLP00020018194	822 (aa)	-	-

Gene Model

Click here to download ENSORLG00020000575's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020000575's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020000575	mbd1b	99	66.587	ENSAPOG00000012810	mbd1b	99	66.707	Acanthochromis_polyacanthus
ENSORLG00020000575	mbd1b	87	76.974	ENSACIG00000010590	mbd1b	99	56.792	Amphilophus_citrinellus
ENSORLG00020000575	mbd1b	99	67.545	ENSAOCG00000020272	mbd1b	99	68.144	Amphiprion_ocellaris
ENSORLG00020000575	mbd1b	99	67.464	ENSAPEG00000023230	mbd1b	99	67.943	Amphiprion_percula
ENSORLG00020000575	mbd1b	99	67.378	ENSATEG00000009608	mbd1b	99	67.616	Anabas_testudineus
ENSORLG00020000575	mbd1b	99	66.042	ENSACLG00000021383	mbd1b	99	65.925	Astatotilapia_calliptera
ENSORLG00020000575	mbd1b	97	56.098	ENSCSEG00000009082	mbd1b	99	56.214	Cynoglossus_semilaevis
ENSORLG00020000575	mbd1b	99	62.827	ENSCVAG00000001167	mbd1b	99	63.258	Cyprinodon_variegatus
ENSORLG00020000575	mbd1b	92	36.175	ENSDARG00000025699	mbd1b	88	34.386	Danio_rerio
ENSORLG00020000575	mbd1b	97	44.457	ENSELUG00000004375	mbd1b	99	42.558	Esox_lucius
ENSORLG00020000575	mbd1b	99	61.740	ENSFHEG00000020120	mbd1b	99	62.098	Fundulus_heteroclitus
ENSORLG00020000575	mbd1b	99	62.395	ENSGAFG00000008975	mbd1b	99	62.694	Gambusia_affinis
ENSORLG00020000575	mbd1b	79	51.379	ENSGACG00000012106	-	99	51.375	Gasterosteus_aculeatus
ENSORLG00020000575	mbd1b	99	66.276	ENSHBUG00000014270	mbd1b	99	66.159	Haplochromis_burtoni
ENSORLG00020000575	mbd1b	98	53.809	ENSHCOG00000009952	mbd1b	99	54.272	Hippocampus_comes
ENSORLG00020000575	mbd1b	92	36.330	ENSIPUG00000015243	-	96	35.401	Ictalurus_punctatus
ENSORLG00020000575	mbd1b	99	63.604	ENSKMAG00000020760	mbd1b	99	63.797	Kryptolebias_marmoratus
ENSORLG00020000575	mbd1b	82	32.741	ENSLACG00000002414	-	71	58.462	Latimeria_chalumnae
ENSORLG00020000575	mbd1b	52	56.923	ENSMMUG00000009050	MBD1	72	31.010	Macaca_mulatta
ENSORLG00020000575	mbd1b	77	66.154	ENSMAMG00000023341	-	96	67.670	Mastacembelus_armatus
ENSORLG00020000575	mbd1b	99	66.159	ENSMZEG00005010421	mbd1b	99	66.042	Maylandia_zebra
ENSORLG00020000575	mbd1b	52	56.923	ENSMICG00000006414	MBD1	60	32.668	Microcebus_murinus
ENSORLG00020000575	mbd1b	81	87.037	ENSMMOG00000011607	mbd1b	83	87.037	Mola_mola
ENSORLG00020000575	mbd1b	99	65.207	ENSMALG00000007808	mbd1b	100	65.212	Monopterus_albus
ENSORLG00020000575	mbd1b	99	65.808	ENSONIG00000020289	mbd1b	99	65.808	Oreochromis_niloticus
ENSORLG00020000575	mbd1b	100	98.552	ENSORLG00000029390	mbd1b	100	98.552	Oryzias_latipes
ENSORLG00020000575	mbd1b	100	99.036	ENSORLG00015014812	mbd1b	100	99.036	Oryzias_latipes_hsok
ENSORLG00020000575	mbd1b	100	86.864	ENSOMEG00000023660	mbd1b	100	86.864	Oryzias_melastigma
ENSORLG00020000575	mbd1b	99	62.336	ENSPFOG00000007511	mbd1b	99	62.679	Poecilia_formosa
ENSORLG00020000575	mbd1b	99	62.455	ENSPLAG00000021258	mbd1b	99	62.321	Poecilia_latipinna
ENSORLG00020000575	mbd1b	99	61.979	ENSPMEG00000024145	mbd1b	99	62.560	Poecilia_mexicana
ENSORLG00020000575	mbd1b	99	62.857	ENSPREG00000021805	mbd1b	99	63.082	Poecilia_reticulata
ENSORLG00020000575	mbd1b	53	56.923	ENSPCOG00000012450	MBD1	50	58.333	Propithecus_coquereli
ENSORLG00020000575	mbd1b	90	40.050	ENSPNAG00000018075	mbd1b	97	38.706	Pygocentrus_nattereri
ENSORLG00020000575	mbd1b	63	52.795	ENSSFOG00015008591	-	64	52.795	Scleropages_formosus
ENSORLG00020000575	mbd1b	92	68.718	ENSSMAG00000014640	mbd1b	83	68.846	Scophthalmus_maximus
ENSORLG00020000575	mbd1b	90	71.895	ENSSDUG00000012996	mbd1b	99	65.955	Seriola_dumerili
ENSORLG00020000575	mbd1b	72	77.922	ENSSLDG00000012422	mbd1b	93	77.922	Seriola_lalandi_dorsalis
ENSORLG00020000575	mbd1b	88	80.745	ENSSPAG00000021447	mbd1b	96	80.745	Stegastes_partitus
ENSORLG00020000575	mbd1b	99	59.856	ENSTRUG00000013422	mbd1b	99	60.457	Takifugu_rubripes
ENSORLG00020000575	mbd1b	67	70.229	ENSTNIG00000007326	-	63	70.229	Tetraodon_nigroviridis
ENSORLG00020000575	mbd1b	99	61.702	ENSXMAG00000005628	mbd1b	99	62.293	Xiphophorus_maculatus