EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020000708 (Gene tree)
Gene ID: -
Gene Symbol: trmt12
Alias: -
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 5091 bases
Position: chr10:8793016-8798106
Accession: ZDB-GENE-060825-182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020021001	MTS	PF05175.14	1.5e-06	1	1
ENSORLP00020021001	Met_10	PF02475.16	2.4e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020030535	-	3449	-	ENSORLP00020021001	396 (aa)	-	-

Gene Model

Click here to download ENSORLG00020000708's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020000708's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020000708	trmt12	96	50.605	ENSG00000183665	TRMT12	92	50.121	Homo_sapiens
ENSORLG00020000708	trmt12	100	74.564	ENSAPOG00000011979	trmt12	100	74.564	Acanthochromis_polyacanthus
ENSORLG00020000708	trmt12	96	51.816	ENSAMEG00000019612	TRMT12	92	51.574	Ailuropoda_melanoleuca
ENSORLG00020000708	trmt12	95	73.037	ENSACIG00000012982	trmt12	99	73.037	Amphilophus_citrinellus
ENSORLG00020000708	trmt12	100	74.564	ENSAOCG00000020570	trmt12	100	74.564	Amphiprion_ocellaris
ENSORLG00020000708	trmt12	100	74.813	ENSAPEG00000006335	trmt12	100	74.813	Amphiprion_percula
ENSORLG00020000708	trmt12	100	71.852	ENSATEG00000018316	trmt12	100	71.852	Anabas_testudineus
ENSORLG00020000708	trmt12	100	72.319	ENSACLG00000001008	trmt12	100	72.319	Astatotilapia_calliptera
ENSORLG00020000708	trmt12	99	54.048	ENSAMXG00000040366	trmt12	99	53.810	Astyanax_mexicanus
ENSORLG00020000708	trmt12	96	51.449	ENSBTAG00000020398	TRMT12	89	51.208	Bos_taurus
ENSORLG00020000708	trmt12	54	38.605	WBGene00009586	F40F9.10	57	35.206	Caenorhabditis_elegans
ENSORLG00020000708	trmt12	96	49.153	ENSCJAG00000022174	TRMT12	92	48.668	Callithrix_jacchus
ENSORLG00020000708	trmt12	96	51.574	ENSCAFG00000001040	TRMT12	94	51.332	Canis_familiaris
ENSORLG00020000708	trmt12	96	51.574	ENSCAFG00020006500	TRMT12	94	51.332	Canis_lupus_dingo
ENSORLG00020000708	trmt12	96	51.456	ENSCHIG00000016574	TRMT12	94	51.214	Capra_hircus
ENSORLG00020000708	trmt12	96	50.121	ENSCPOG00000026520	TRMT12	93	50.363	Cavia_porcellus
ENSORLG00020000708	trmt12	96	50.847	ENSCSAG00000018615	TRMT12	92	50.363	Chlorocebus_sabaeus
ENSORLG00020000708	trmt12	99	51.724	ENSCPBG00000014290	TRMT12	95	51.264	Chrysemys_picta_bellii
ENSORLG00020000708	trmt12	72	49.141	ENSCING00000019633	-	97	49.141	Ciona_intestinalis
ENSORLG00020000708	trmt12	75	51.171	ENSCSAVG00000000415	-	94	51.342	Ciona_savignyi
ENSORLG00020000708	trmt12	74	59.532	ENSCGRG00001014834	Trmt12	71	59.532	Cricetulus_griseus_chok1gshd
ENSORLG00020000708	trmt12	99	64.216	ENSCSEG00000002675	trmt12	95	64.216	Cynoglossus_semilaevis
ENSORLG00020000708	trmt12	100	70.250	ENSCVAG00000005590	trmt12	100	68.500	Cyprinodon_variegatus
ENSORLG00020000708	trmt12	99	56.265	ENSDARG00000060338	trmt12	99	56.265	Danio_rerio
ENSORLG00020000708	trmt12	96	48.675	ENSETEG00000009373	TRMT12	92	48.675	Echinops_telfairi
ENSORLG00020000708	trmt12	96	51.816	ENSEASG00005022441	TRMT12	94	51.574	Equus_asinus_asinus
ENSORLG00020000708	trmt12	96	49.758	ENSEEUG00000004844	TRMT12	93	49.758	Erinaceus_europaeus
ENSORLG00020000708	trmt12	99	59.852	ENSELUG00000004240	trmt12	99	60.753	Esox_lucius
ENSORLG00020000708	trmt12	65	60.142	ENSFALG00000003825	TRMT12	98	65.888	Ficedula_albicollis
ENSORLG00020000708	trmt12	96	50.605	ENSFDAG00000016647	TRMT12	94	50.363	Fukomys_damarensis
ENSORLG00020000708	trmt12	93	62.198	ENSFHEG00000017338	trmt12	96	62.198	Fundulus_heteroclitus
ENSORLG00020000708	trmt12	79	60.237	ENSGALG00000006773	TRMT12	71	61.111	Gallus_gallus
ENSORLG00020000708	trmt12	100	70.896	ENSGAFG00000020056	trmt12	100	69.652	Gambusia_affinis
ENSORLG00020000708	trmt12	95	68.668	ENSGACG00000017351	trmt12	99	67.102	Gasterosteus_aculeatus
ENSORLG00020000708	trmt12	99	51.620	ENSGAGG00000006032	TRMT12	97	51.157	Gopherus_agassizii
ENSORLG00020000708	trmt12	100	72.070	ENSHBUG00000016412	trmt12	100	72.070	Haplochromis_burtoni
ENSORLG00020000708	trmt12	96	49.879	ENSHGLG00000020498	TRMT12	94	49.637	Heterocephalus_glaber_female
ENSORLG00020000708	trmt12	96	49.879	ENSHGLG00100020132	TRMT12	94	49.637	Heterocephalus_glaber_male
ENSORLG00020000708	trmt12	100	67.419	ENSHCOG00000005050	trmt12	94	73.765	Hippocampus_comes
ENSORLG00020000708	trmt12	99	56.158	ENSIPUG00000018011	trmt12	92	56.158	Ictalurus_punctatus
ENSORLG00020000708	trmt12	97	49.880	ENSSTOG00000030617	TRMT12	94	49.639	Ictidomys_tridecemlineatus
ENSORLG00020000708	trmt12	99	71.500	ENSKMAG00000000891	trmt12	99	71.500	Kryptolebias_marmoratus
ENSORLG00020000708	trmt12	100	66.667	ENSLBEG00000028712	trmt12	100	66.667	Labrus_bergylta
ENSORLG00020000708	trmt12	54	75.688	ENSLBEG00000017456	-	89	75.688	Labrus_bergylta
ENSORLG00020000708	trmt12	97	52.983	ENSLACG00000015869	TRMT12	94	52.506	Latimeria_chalumnae
ENSORLG00020000708	trmt12	99	55.665	ENSLOCG00000015290	trmt12	99	55.665	Lepisosteus_oculatus
ENSORLG00020000708	trmt12	96	51.574	ENSLAFG00000012519	TRMT12	94	51.332	Loxodonta_africana
ENSORLG00020000708	trmt12	96	50.363	ENSMMUG00000015490	TRMT12	93	49.879	Macaca_mulatta
ENSORLG00020000708	trmt12	99	67.568	ENSMAMG00000020311	trmt12	99	67.568	Mastacembelus_armatus
ENSORLG00020000708	trmt12	100	71.571	ENSMZEG00005007349	trmt12	100	71.571	Maylandia_zebra
ENSORLG00020000708	trmt12	99	51.064	ENSMGAG00000004174	TRMT12	95	51.537	Meleagris_gallopavo
ENSORLG00020000708	trmt12	99	70.720	ENSMMOG00000000412	trmt12	99	70.720	Mola_mola
ENSORLG00020000708	trmt12	96	52.500	ENSMODG00000021403	-	92	52.500	Monodelphis_domestica
ENSORLG00020000708	trmt12	95	50.378	ENSMODG00000011798	-	84	50.126	Monodelphis_domestica
ENSORLG00020000708	trmt12	100	71.605	ENSMALG00000008668	trmt12	100	71.605	Monopterus_albus
ENSORLG00020000708	trmt12	96	49.758	MGP_CAROLIEiJ_G0019820	Trmt12	93	49.758	Mus_caroli
ENSORLG00020000708	trmt12	96	50.242	ENSMUSG00000037085	Trmt12	92	50.242	Mus_musculus
ENSORLG00020000708	trmt12	96	51.932	MGP_PahariEiJ_G0019829	Trmt12	93	51.691	Mus_pahari
ENSORLG00020000708	trmt12	96	50.000	MGP_SPRETEiJ_G0020717	Trmt12	92	50.000	Mus_spretus
ENSORLG00020000708	trmt12	96	51.683	ENSMPUG00000019150	TRMT12	93	51.442	Mustela_putorius_furo
ENSORLG00020000708	trmt12	96	50.120	ENSMLUG00000003753	TRMT12	94	49.880	Myotis_lucifugus
ENSORLG00020000708	trmt12	96	48.792	ENSNGAG00000014548	Trmt12	95	48.551	Nannospalax_galili
ENSORLG00020000708	trmt12	100	71.859	ENSNBRG00000021510	trmt12	100	71.859	Neolamprologus_brichardi
ENSORLG00020000708	trmt12	96	48.058	ENSOPRG00000008067	TRMT12	92	48.301	Ochotona_princeps
ENSORLG00020000708	trmt12	96	51.090	ENSODEG00000018933	TRMT12	94	50.847	Octodon_degus
ENSORLG00020000708	trmt12	100	74.314	ENSONIG00000002614	trmt12	100	74.314	Oreochromis_niloticus
ENSORLG00020000708	trmt12	96	45.966	ENSOANG00000009987	TRMT12	95	45.477	Ornithorhynchus_anatinus
ENSORLG00020000708	trmt12	96	47.826	ENSOCUG00000026379	TRMT12	92	47.585	Oryctolagus_cuniculus
ENSORLG00020000708	trmt12	100	97.727	ENSORLG00000001280	trmt12	100	97.727	Oryzias_latipes
ENSORLG00020000708	trmt12	100	97.475	ENSORLG00015012344	trmt12	100	97.475	Oryzias_latipes_hsok
ENSORLG00020000708	trmt12	100	85.606	ENSOMEG00000015267	trmt12	98	85.606	Oryzias_melastigma
ENSORLG00020000708	trmt12	96	50.240	ENSOGAG00000015845	TRMT12	94	50.000	Otolemur_garnettii
ENSORLG00020000708	trmt12	99	58.663	ENSPKIG00000004640	trmt12	99	58.663	Paramormyrops_kingsleyae
ENSORLG00020000708	trmt12	59	60.595	ENSPSIG00000003476	TRMT12	99	60.595	Pelodiscus_sinensis
ENSORLG00020000708	trmt12	99	63.027	ENSPMGG00000016356	trmt12	97	63.027	Periophthalmus_magnuspinnatus
ENSORLG00020000708	trmt12	96	52.500	ENSPCIG00000002967	TRMT12	85	51.750	Phascolarctos_cinereus
ENSORLG00020000708	trmt12	98	67.176	ENSPFOG00000016931	trmt12	97	65.903	Poecilia_formosa
ENSORLG00020000708	trmt12	100	68.000	ENSPLAG00000020621	trmt12	100	68.000	Poecilia_latipinna
ENSORLG00020000708	trmt12	100	69.327	ENSPMEG00000000818	trmt12	100	68.080	Poecilia_mexicana
ENSORLG00020000708	trmt12	100	69.925	ENSPREG00000011621	trmt12	100	68.672	Poecilia_reticulata
ENSORLG00020000708	trmt12	96	50.363	ENSPPYG00000018866	TRMT12	92	49.879	Pongo_abelii
ENSORLG00020000708	trmt12	96	51.449	ENSPCAG00000000556	TRMT12	93	50.966	Procavia_capensis
ENSORLG00020000708	trmt12	96	51.090	ENSPVAG00000009149	TRMT12	93	50.847	Pteropus_vampyrus
ENSORLG00020000708	trmt12	95	71.990	ENSPNYG00000010696	trmt12	99	71.990	Pundamilia_nyererei
ENSORLG00020000708	trmt12	99	53.938	ENSPNAG00000019028	trmt12	99	53.938	Pygocentrus_nattereri
ENSORLG00020000708	trmt12	96	51.699	ENSRNOG00000008978	Trmt12	94	51.456	Rattus_norvegicus
ENSORLG00020000708	trmt12	96	51.750	ENSSHAG00000003345	TRMT12	92	51.000	Sarcophilus_harrisii
ENSORLG00020000708	trmt12	99	56.490	ENSSFOG00015006090	trmt12	99	56.010	Scleropages_formosus
ENSORLG00020000708	trmt12	99	71.040	ENSSMAG00000013247	trmt12	99	69.059	Scophthalmus_maximus
ENSORLG00020000708	trmt12	100	73.580	ENSSDUG00000006168	trmt12	100	73.580	Seriola_dumerili
ENSORLG00020000708	trmt12	100	73.086	ENSSLDG00000025007	trmt12	100	73.086	Seriola_lalandi_dorsalis
ENSORLG00020000708	trmt12	97	50.353	ENSSPUG00000005321	TRMT12	94	50.353	Sphenodon_punctatus
ENSORLG00020000708	trmt12	100	74.813	ENSSPAG00000009435	trmt12	97	74.813	Stegastes_partitus
ENSORLG00020000708	trmt12	99	49.879	ENSTGUG00000002280	TRMT12	99	50.363	Taeniopygia_guttata
ENSORLG00020000708	trmt12	99	66.169	ENSTRUG00000011548	trmt12	99	66.169	Takifugu_rubripes
ENSORLG00020000708	trmt12	99	66.089	ENSTNIG00000016866	trmt12	99	65.842	Tetraodon_nigroviridis
ENSORLG00020000708	trmt12	96	51.816	ENSUAMG00000002067	TRMT12	95	51.574	Ursus_americanus
ENSORLG00020000708	trmt12	96	51.574	ENSVPAG00000006519	TRMT12	93	51.332	Vicugna_pacos
ENSORLG00020000708	trmt12	97	51.429	ENSVVUG00000016790	TRMT12	93	50.478	Vulpes_vulpes
ENSORLG00020000708	trmt12	99	52.882	ENSXETG00000009641	trmt12	95	52.381	Xenopus_tropicalis
ENSORLG00020000708	trmt12	100	69.727	ENSXCOG00000016505	trmt12	100	68.238	Xiphophorus_couchianus
ENSORLG00020000708	trmt12	100	70.647	ENSXMAG00000025318	trmt12	100	69.154	Xiphophorus_maculatus