EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020000785 (Gene tree)
Gene ID: -
Gene Symbol: atxn2
Alias: -
Full Name: ataxin 2
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 19927 bases
Position: chr9:6879701-6899627
Accession: ZDB-GENE-060526-217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020002463	PAM2	PF07145.15	6.9e-06	1	1
ENSORLP00020002471	PAM2	PF07145.15	7e-06	1	1
ENSORLP00020002463	LsmAD	PF06741.13	5.5e-15	1	1
ENSORLP00020002471	LsmAD	PF06741.13	1.7e-14	1	1
ENSORLP00020002463	SM-ATX	PF14438.6	2.9e-21	1	1
ENSORLP00020002471	SM-ATX	PF14438.6	3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020011256	-	3505	-	ENSORLP00020002471	1042 (aa)	-	-
ENSORLT00020011282	-	3523	-	ENSORLP00020002463	1033 (aa)	-	-

Gene Model

Click here to download ENSORLG00020000785's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020000785's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020000785	atxn2	99	84.608	ENSAPOG00000014663	atxn2	99	84.660	Acanthochromis_polyacanthus
ENSORLG00020000785	atxn2	94	88.732	ENSACIG00000004928	atxn2	79	88.732	Amphilophus_citrinellus
ENSORLG00020000785	atxn2	99	83.988	ENSAOCG00000001107	atxn2	99	84.851	Amphiprion_ocellaris
ENSORLG00020000785	atxn2	99	84.130	ENSAPEG00000020250	atxn2	99	84.947	Amphiprion_percula
ENSORLG00020000785	atxn2	94	87.324	ENSATEG00000018587	atxn2	99	62.364	Anabas_testudineus
ENSORLG00020000785	atxn2	96	67.203	ENSACAG00000002419	ATXN2	98	62.155	Anolis_carolinensis
ENSORLG00020000785	atxn2	97	67.197	ENSANAG00000022522	ATXN2	98	62.353	Aotus_nancymaae
ENSORLG00020000785	atxn2	94	87.324	ENSACLG00000013359	atxn2	97	68.904	Astatotilapia_calliptera
ENSORLG00020000785	atxn2	99	69.466	ENSAMXG00000002342	atxn2	99	68.966	Astyanax_mexicanus
ENSORLG00020000785	atxn2	89	51.976	ENSBTAG00000022069	ATXN2	99	47.934	Bos_taurus
ENSORLG00020000785	atxn2	97	67.085	ENSCJAG00000011756	ATXN2	99	47.481	Callithrix_jacchus
ENSORLG00020000785	atxn2	95	68.333	ENSCAFG00000008606	ATXN2	68	65.103	Canis_familiaris
ENSORLG00020000785	atxn2	94	69.204	ENSCAFG00020017041	ATXN2	99	47.842	Canis_lupus_dingo
ENSORLG00020000785	atxn2	73	79.646	ENSCAPG00000013332	ATXN2	97	50.365	Cavia_aperea
ENSORLG00020000785	atxn2	97	67.192	ENSCCAG00000026267	ATXN2	98	62.353	Cebus_capucinus
ENSORLG00020000785	atxn2	95	53.090	ENSCATG00000017877	ATXN2	99	47.810	Cercocebus_atys
ENSORLG00020000785	atxn2	76	60.648	ENSCHOG00000004284	ATXN2	78	60.930	Choloepus_hoffmanni
ENSORLG00020000785	atxn2	94	57.605	ENSCPBG00000003465	ATXN2	99	57.507	Chrysemys_picta_bellii
ENSORLG00020000785	atxn2	95	60.606	ENSCGRG00001022603	Atxn2	81	58.358	Cricetulus_griseus_chok1gshd
ENSORLG00020000785	atxn2	97	68.153	ENSCGRG00000015823	Atxn2	97	62.740	Cricetulus_griseus_crigri
ENSORLG00020000785	atxn2	99	80.340	ENSCSEG00000018366	atxn2	99	80.248	Cynoglossus_semilaevis
ENSORLG00020000785	atxn2	99	78.232	ENSCSEG00000009072	-	99	78.386	Cynoglossus_semilaevis
ENSORLG00020000785	atxn2	97	81.158	ENSCVAG00000020160	atxn2	99	80.115	Cyprinodon_variegatus
ENSORLG00020000785	atxn2	88	58.824	ENSDORG00000000808	Atxn2	96	38.086	Dipodomys_ordii
ENSORLG00020000785	atxn2	90	57.878	ENSETEG00000005224	ATXN2	72	57.878	Echinops_telfairi
ENSORLG00020000785	atxn2	96	56.950	ENSEASG00005012077	ATXN2	99	57.674	Equus_asinus_asinus
ENSORLG00020000785	atxn2	74	67.419	ENSEEUG00000014635	-	71	67.419	Erinaceus_europaeus
ENSORLG00020000785	atxn2	99	67.140	ENSELUG00000019632	atxn2	99	67.113	Esox_lucius
ENSORLG00020000785	atxn2	95	69.000	ENSFCAG00000003178	ATXN2	99	47.530	Felis_catus
ENSORLG00020000785	atxn2	91	80.669	ENSFHEG00000019561	atxn2	98	80.243	Fundulus_heteroclitus
ENSORLG00020000785	atxn2	88	86.348	ENSGMOG00000007412	atxn2	65	86.395	Gadus_morhua
ENSORLG00020000785	atxn2	94	89.761	ENSGAFG00000003302	atxn2	99	81.592	Gambusia_affinis
ENSORLG00020000785	atxn2	94	58.541	ENSGAGG00000005014	ATXN2	99	58.442	Gopherus_agassizii
ENSORLG00020000785	atxn2	98	65.732	ENSGGOG00000002137	ATXN2	99	48.485	Gorilla_gorilla
ENSORLG00020000785	atxn2	99	84.408	ENSHBUG00000002921	atxn2	99	84.019	Haplochromis_burtoni
ENSORLG00020000785	atxn2	99	79.524	ENSHCOG00000005278	atxn2	96	78.877	Hippocampus_comes
ENSORLG00020000785	atxn2	99	65.403	ENSIPUG00000016649	atxn2	99	66.032	Ictalurus_punctatus
ENSORLG00020000785	atxn2	67	52.493	ENSSTOG00000000978	ATXN2	99	52.891	Ictidomys_tridecemlineatus
ENSORLG00020000785	atxn2	99	83.301	ENSKMAG00000000980	atxn2	99	83.685	Kryptolebias_marmoratus
ENSORLG00020000785	atxn2	59	76.013	ENSLBEG00000017484	atxn2	89	76.792	Labrus_bergylta
ENSORLG00020000785	atxn2	97	75.719	ENSLOCG00000007880	atxn2	96	67.285	Lepisosteus_oculatus
ENSORLG00020000785	atxn2	96	68.167	ENSLAFG00000007416	ATXN2	94	68.167	Loxodonta_africana
ENSORLG00020000785	atxn2	99	84.069	ENSMAMG00000019160	atxn2	99	83.654	Mastacembelus_armatus
ENSORLG00020000785	atxn2	99	84.312	ENSMZEG00005008476	atxn2	99	83.923	Maylandia_zebra
ENSORLG00020000785	atxn2	65	52.933	ENSMAUG00000008223	-	97	52.847	Mesocricetus_auratus
ENSORLG00020000785	atxn2	58	54.295	ENSMICG00000013541	ATXN2	96	54.561	Microcebus_murinus
ENSORLG00020000785	atxn2	65	52.489	ENSMOCG00000005219	Atxn2	98	52.180	Microtus_ochrogaster
ENSORLG00020000785	atxn2	99	82.991	ENSMMOG00000013189	atxn2	98	89.167	Mola_mola
ENSORLG00020000785	atxn2	98	66.667	ENSMODG00000012221	ATXN2	79	68.269	Monodelphis_domestica
ENSORLG00020000785	atxn2	99	82.726	ENSMALG00000018529	atxn2	99	82.630	Monopterus_albus
ENSORLG00020000785	atxn2	95	67.114	MGP_CAROLIEiJ_G0027692	Atxn2	93	61.308	Mus_caroli
ENSORLG00020000785	atxn2	65	51.433	ENSMUSG00000042605	Atxn2	95	60.526	Mus_musculus
ENSORLG00020000785	atxn2	65	51.289	MGP_PahariEiJ_G0024272	Atxn2	97	51.095	Mus_pahari
ENSORLG00020000785	atxn2	95	67.450	MGP_SPRETEiJ_G0028690	Atxn2	95	60.150	Mus_spretus
ENSORLG00020000785	atxn2	97	68.371	ENSMLUG00000015559	ATXN2	99	48.068	Myotis_lucifugus
ENSORLG00020000785	atxn2	82	75.000	ENSMEUG00000012244	-	67	75.000	Notamacropus_eugenii
ENSORLG00020000785	atxn2	95	60.403	ENSOPRG00000014599	ATXN2	99	46.049	Ochotona_princeps
ENSORLG00020000785	atxn2	96	88.746	ENSONIG00000014521	atxn2	92	88.746	Oreochromis_niloticus
ENSORLG00020000785	atxn2	82	75.796	ENSOANG00000004796	ATXN2	99	47.440	Ornithorhynchus_anatinus
ENSORLG00020000785	atxn2	96	66.881	ENSOCUG00000002855	ATXN2	69	61.602	Oryctolagus_cuniculus
ENSORLG00020000785	atxn2	94	98.774	ENSORLG00000003606	atxn2	100	98.671	Oryzias_latipes
ENSORLG00020000785	atxn2	100	98.466	ENSORLG00015012345	atxn2	100	98.466	Oryzias_latipes_hsok
ENSORLG00020000785	atxn2	99	93.828	ENSOMEG00000020080	atxn2	99	93.810	Oryzias_melastigma
ENSORLG00020000785	atxn2	95	68.667	ENSPPRG00000003573	ATXN2	99	47.530	Panthera_pardus
ENSORLG00020000785	atxn2	96	67.638	ENSPTIG00000021122	ATXN2	99	48.301	Panthera_tigris_altaica
ENSORLG00020000785	atxn2	97	78.710	ENSPKIG00000023134	atxn2	100	69.128	Paramormyrops_kingsleyae
ENSORLG00020000785	atxn2	96	71.061	ENSPSIG00000002353	-	99	45.077	Pelodiscus_sinensis
ENSORLG00020000785	atxn2	95	85.211	ENSPMGG00000005074	atxn2	97	77.341	Periophthalmus_magnuspinnatus
ENSORLG00020000785	atxn2	65	51.783	ENSPEMG00000015340	Atxn2	98	51.453	Peromyscus_maniculatus_bairdii
ENSORLG00020000785	atxn2	59	65.625	ENSPCIG00000006165	-	93	66.827	Phascolarctos_cinereus
ENSORLG00020000785	atxn2	97	81.471	ENSPLAG00000015241	atxn2	99	81.346	Poecilia_latipinna
ENSORLG00020000785	atxn2	97	81.961	ENSPMEG00000016681	atxn2	99	81.827	Poecilia_mexicana
ENSORLG00020000785	atxn2	95	89.384	ENSPREG00000014825	atxn2	93	89.384	Poecilia_reticulata
ENSORLG00020000785	atxn2	95	67.333	ENSPPYG00000004963	ATXN2	86	48.297	Pongo_abelii
ENSORLG00020000785	atxn2	94	66.784	ENSPCOG00000022031	ATXN2	99	48.844	Propithecus_coquereli
ENSORLG00020000785	atxn2	95	68.333	ENSPVAG00000013179	ATXN2	78	66.172	Pteropus_vampyrus
ENSORLG00020000785	atxn2	60	67.528	ENSPNYG00000016981	atxn2	81	84.667	Pundamilia_nyererei
ENSORLG00020000785	atxn2	99	70.433	ENSPNAG00000010889	atxn2	99	70.124	Pygocentrus_nattereri
ENSORLG00020000785	atxn2	97	67.834	ENSRNOG00000001256	Atxn2	98	47.534	Rattus_norvegicus
ENSORLG00020000785	atxn2	94	68.166	ENSSBOG00000031563	ATXN2	98	62.353	Saimiri_boliviensis_boliviensis
ENSORLG00020000785	atxn2	97	67.412	ENSSHAG00000007304	ATXN2	99	47.982	Sarcophilus_harrisii
ENSORLG00020000785	atxn2	94	77.544	ENSSFOG00015017229	atxn2	99	57.236	Scleropages_formosus
ENSORLG00020000785	atxn2	94	90.526	ENSSMAG00000004627	atxn2	93	90.526	Scophthalmus_maximus
ENSORLG00020000785	atxn2	99	84.770	ENSSDUG00000001223	atxn2	97	84.667	Seriola_dumerili
ENSORLG00020000785	atxn2	94	89.437	ENSSLDG00000019837	atxn2	99	71.150	Seriola_lalandi_dorsalis
ENSORLG00020000785	atxn2	70	66.935	ENSSARG00000006291	ATXN2	67	66.129	Sorex_araneus
ENSORLG00020000785	atxn2	99	84.226	ENSSPAG00000000377	atxn2	98	84.712	Stegastes_partitus
ENSORLG00020000785	atxn2	96	67.846	ENSSSCG00000009834	ATXN2	93	57.490	Sus_scrofa
ENSORLG00020000785	atxn2	96	56.280	ENSTGUG00000006497	ATXN2	99	56.303	Taeniopygia_guttata
ENSORLG00020000785	atxn2	94	78.809	ENSTRUG00000016801	atxn2	99	79.032	Takifugu_rubripes
ENSORLG00020000785	atxn2	79	62.222	ENSTBEG00000001985	ATXN2	82	62.222	Tupaia_belangeri
ENSORLG00020000785	atxn2	84	65.000	ENSTTRG00000000952	ATXN2	57	62.500	Tursiops_truncatus
ENSORLG00020000785	atxn2	94	69.204	ENSVVUG00000016107	ATXN2	99	48.118	Vulpes_vulpes
ENSORLG00020000785	atxn2	95	66.340	ENSXETG00000020912	atxn2	99	47.953	Xenopus_tropicalis
ENSORLG00020000785	atxn2	59	76.183	ENSXCOG00000010001	atxn2	95	76.752	Xiphophorus_couchianus
ENSORLG00020000785	atxn2	97	82.941	ENSXMAG00000003481	atxn2	99	82.246	Xiphophorus_maculatus