EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020000801 (Gene tree)
Gene ID: -
Gene Symbol: sharpin
Alias: -
Full Name: SHANK-associated RH domain interacting protein
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 7281 bases
Position: chr17:23897633-23904913
Accession: ZDB-GENE-101223-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020027068	zf-RanBP	PF00641.18	2.6e-06	1	1
ENSORLP00020008967	zf-RanBP	PF00641.18	2.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020000285	-	3369	-	ENSORLP00020008967	433 (aa)	-	-
ENSORLT00020000305	-	3292	-	ENSORLP00020027068	433 (aa)	-	-

Gene Model

Click here to download ENSORLG00020000801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020000801's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020000801	sharpin	95	55.809	ENSORLG00020018619	shrprbck1r	60	55.809

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020000801	sharpin	95	56.335	ENSAPOG00000022737	shrprbck1r	60	56.335	Acanthochromis_polyacanthus
ENSORLG00020000801	sharpin	100	85.388	ENSAPOG00000023352	sharpin	100	85.388	Acanthochromis_polyacanthus
ENSORLG00020000801	sharpin	95	56.909	ENSACIG00000002184	shrprbck1r	88	54.801	Amphilophus_citrinellus
ENSORLG00020000801	sharpin	100	85.616	ENSAOCG00000017464	sharpin	100	85.616	Amphiprion_ocellaris
ENSORLG00020000801	sharpin	95	56.463	ENSAOCG00000002890	shrprbck1r	60	56.463	Amphiprion_ocellaris
ENSORLG00020000801	sharpin	100	85.845	ENSAPEG00000004049	sharpin	100	85.845	Amphiprion_percula
ENSORLG00020000801	sharpin	95	55.402	ENSAPEG00000023274	shrprbck1r	59	55.402	Amphiprion_percula
ENSORLG00020000801	sharpin	100	83.218	ENSATEG00000007832	sharpin	90	83.218	Anabas_testudineus
ENSORLG00020000801	sharpin	95	55.760	ENSATEG00000014561	shrprbck1r	59	56.221	Anabas_testudineus
ENSORLG00020000801	sharpin	95	55.684	ENSACLG00000022609	shrprbck1r	60	56.148	Astatotilapia_calliptera
ENSORLG00020000801	sharpin	62	87.879	ENSACLG00000020160	-	86	87.879	Astatotilapia_calliptera
ENSORLG00020000801	sharpin	95	57.399	ENSAMXG00000021016	shrprbck1r	66	56.951	Astyanax_mexicanus
ENSORLG00020000801	sharpin	87	56.853	ENSAMXG00000006229	sharpin	97	55.838	Astyanax_mexicanus
ENSORLG00020000801	sharpin	95	50.467	ENSCSEG00000011306	shrprbck1r	59	51.869	Cynoglossus_semilaevis
ENSORLG00020000801	sharpin	100	77.294	ENSCVAG00000006586	sharpin	100	77.294	Cyprinodon_variegatus
ENSORLG00020000801	sharpin	98	53.167	ENSCVAG00000007250	shrprbck1r	62	53.167	Cyprinodon_variegatus
ENSORLG00020000801	sharpin	91	53.285	ENSDARG00000076995	sharpin	98	53.285	Danio_rerio
ENSORLG00020000801	sharpin	99	54.873	ENSDARG00000059871	shrprbck1r	96	56.034	Danio_rerio
ENSORLG00020000801	sharpin	95	60.329	ENSELUG00000016022	shrprbck1r	59	60.329	Esox_lucius
ENSORLG00020000801	sharpin	100	79.128	ENSFHEG00000013564	sharpin	99	79.128	Fundulus_heteroclitus
ENSORLG00020000801	sharpin	84	75.229	ENSGMOG00000010123	sharpin	94	75.229	Gadus_morhua
ENSORLG00020000801	sharpin	96	58.513	ENSGAFG00000021405	sharpin	97	58.513	Gambusia_affinis
ENSORLG00020000801	sharpin	95	53.846	ENSGAFG00000009309	shrprbck1r	59	53.846	Gambusia_affinis
ENSORLG00020000801	sharpin	95	56.148	ENSHBUG00000021933	shrprbck1r	60	56.148	Haplochromis_burtoni
ENSORLG00020000801	sharpin	97	70.000	ENSHCOG00000018847	sharpin	80	71.359	Hippocampus_comes
ENSORLG00020000801	sharpin	87	57.364	ENSIPUG00000011951	sharpin	99	56.331	Ictalurus_punctatus
ENSORLG00020000801	sharpin	88	55.949	ENSIPUG00000014247	shrprbck1r	58	54.265	Ictalurus_punctatus
ENSORLG00020000801	sharpin	95	54.525	ENSKMAG00000015215	shrprbck1r	60	54.977	Kryptolebias_marmoratus
ENSORLG00020000801	sharpin	97	78.220	ENSKMAG00000015204	sharpin	77	78.220	Kryptolebias_marmoratus
ENSORLG00020000801	sharpin	95	55.220	ENSLBEG00000016876	shrprbck1r	60	56.381	Labrus_bergylta
ENSORLG00020000801	sharpin	100	84.932	ENSLBEG00000016624	sharpin	99	84.932	Labrus_bergylta
ENSORLG00020000801	sharpin	86	47.487	ENSLACG00000010948	-	59	45.602	Latimeria_chalumnae
ENSORLG00020000801	sharpin	94	62.322	ENSLOCG00000008910	shrprbck1r	59	61.827	Lepisosteus_oculatus
ENSORLG00020000801	sharpin	95	54.854	ENSMAMG00000014645	sharpin	94	56.416	Mastacembelus_armatus
ENSORLG00020000801	sharpin	95	54.673	ENSMAMG00000022930	shrprbck1r	60	54.801	Mastacembelus_armatus
ENSORLG00020000801	sharpin	95	55.452	ENSMZEG00005021257	shrprbck1r	60	56.148	Maylandia_zebra
ENSORLG00020000801	sharpin	79	85.393	ENSMMOG00000016788	sharpin	96	85.393	Mola_mola
ENSORLG00020000801	sharpin	95	53.776	ENSMMOG00000003764	shrprbck1r	59	53.915	Mola_mola
ENSORLG00020000801	sharpin	88	58.040	ENSMALG00000008861	shrprbck1r	55	58.040	Monopterus_albus
ENSORLG00020000801	sharpin	95	53.256	ENSMALG00000020528	sharpin	95	96.552	Monopterus_albus
ENSORLG00020000801	sharpin	76	65.653	ENSNBRG00000012382	sharpin	94	65.653	Neolamprologus_brichardi
ENSORLG00020000801	sharpin	95	54.988	ENSNBRG00000002270	shrprbck1r	60	55.684	Neolamprologus_brichardi
ENSORLG00020000801	sharpin	95	55.841	ENSONIG00000014401	shrprbck1r	60	56.542	Oreochromis_niloticus
ENSORLG00020000801	sharpin	90	73.710	ENSONIG00000009626	-	99	73.710	Oreochromis_niloticus
ENSORLG00020000801	sharpin	100	98.848	ENSORLG00000017281	sharpin	100	98.848	Oryzias_latipes
ENSORLG00020000801	sharpin	95	55.581	ENSORLG00000007392	shrprbck1r	60	55.581	Oryzias_latipes
ENSORLG00020000801	sharpin	100	98.845	ENSORLG00015009860	sharpin	100	98.845	Oryzias_latipes_hsok
ENSORLG00020000801	sharpin	95	55.455	ENSORLG00015018865	shrprbck1r	59	55.455	Oryzias_latipes_hsok
ENSORLG00020000801	sharpin	95	55.708	ENSOMEG00000012749	shrprbck1r	60	55.708	Oryzias_melastigma
ENSORLG00020000801	sharpin	97	66.268	ENSOMEG00000005729	sharpin	91	66.427	Oryzias_melastigma
ENSORLG00020000801	sharpin	100	57.082	ENSPKIG00000018308	-	88	60.520	Paramormyrops_kingsleyae
ENSORLG00020000801	sharpin	98	62.385	ENSPKIG00000006933	shrprbck1r	61	62.385	Paramormyrops_kingsleyae
ENSORLG00020000801	sharpin	73	77.108	ENSPMGG00000019318	sharpin	94	80.899	Periophthalmus_magnuspinnatus
ENSORLG00020000801	sharpin	95	54.374	ENSPMGG00000013254	shrprbck1r	59	54.374	Periophthalmus_magnuspinnatus
ENSORLG00020000801	sharpin	95	53.917	ENSPFOG00000004214	shrprbck1r	89	53.917	Poecilia_formosa
ENSORLG00020000801	sharpin	100	78.440	ENSPFOG00000015253	sharpin	100	78.440	Poecilia_formosa
ENSORLG00020000801	sharpin	95	53.917	ENSPLAG00000020523	shrprbck1r	59	53.917	Poecilia_latipinna
ENSORLG00020000801	sharpin	100	78.670	ENSPLAG00000000423	sharpin	100	78.670	Poecilia_latipinna
ENSORLG00020000801	sharpin	95	54.861	ENSPMEG00000006877	shrprbck1r	59	54.861	Poecilia_mexicana
ENSORLG00020000801	sharpin	97	54.785	ENSPMEG00000023030	sharpin	91	54.785	Poecilia_mexicana
ENSORLG00020000801	sharpin	100	77.803	ENSPREG00000009702	sharpin	100	77.803	Poecilia_reticulata
ENSORLG00020000801	sharpin	95	52.535	ENSPREG00000014689	shrprbck1r	59	52.535	Poecilia_reticulata
ENSORLG00020000801	sharpin	95	55.452	ENSPNYG00000022601	shrprbck1r	60	56.148	Pundamilia_nyererei
ENSORLG00020000801	sharpin	87	53.886	ENSPNAG00000002911	sharpin	99	52.850	Pygocentrus_nattereri
ENSORLG00020000801	sharpin	95	57.753	ENSPNAG00000007847	shrprbck1r	60	58.503	Pygocentrus_nattereri
ENSORLG00020000801	sharpin	95	53.304	ENSSFOG00015004028	sharpin	93	54.185	Scleropages_formosus
ENSORLG00020000801	sharpin	95	56.193	ENSSMAG00000018085	shrprbck1r	60	57.110	Scophthalmus_maximus
ENSORLG00020000801	sharpin	95	55.708	ENSSDUG00000002959	shrprbck1r	59	56.849	Seriola_dumerili
ENSORLG00020000801	sharpin	95	62.470	ENSSDUG00000019039	sharpin	95	62.470	Seriola_dumerili
ENSORLG00020000801	sharpin	95	55.329	ENSSLDG00000009026	shrprbck1r	60	56.463	Seriola_lalandi_dorsalis
ENSORLG00020000801	sharpin	95	55.928	ENSSPAG00000016097	shrprbck1r	61	55.928	Stegastes_partitus
ENSORLG00020000801	sharpin	62	91.892	ENSSPAG00000021807	sharpin	92	91.892	Stegastes_partitus
ENSORLG00020000801	sharpin	95	68.281	ENSTRUG00000011046	sharpin	96	69.007	Takifugu_rubripes
ENSORLG00020000801	sharpin	95	52.995	ENSTRUG00000006949	shrprbck1r	58	53.687	Takifugu_rubripes
ENSORLG00020000801	sharpin	92	71.638	ENSTNIG00000008521	sharpin	99	71.638	Tetraodon_nigroviridis
ENSORLG00020000801	sharpin	97	56.459	ENSXCOG00000015019	sharpin	99	56.459	Xiphophorus_couchianus
ENSORLG00020000801	sharpin	98	51.794	ENSXCOG00000006701	shrprbck1r	61	51.794	Xiphophorus_couchianus
ENSORLG00020000801	sharpin	100	78.261	ENSXMAG00000022076	sharpin	100	78.261	Xiphophorus_maculatus
ENSORLG00020000801	sharpin	98	51.570	ENSXMAG00000018972	shrprbck1r	61	51.570	Xiphophorus_maculatus