EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020000858 (Gene tree)
Gene ID: -
Gene Symbol: ddx54
Alias: -
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 54
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 7748 bases
Position: chr12:12034631-12042378
Accession: ZDB-GENE-021220-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020018016	DBP10CT	PF08147.12	2.2e-13	1	1
ENSORLP00020018060	DBP10CT	PF08147.12	2.4e-13	1	1
ENSORLP00020018060	DEAD	PF00270.29	1.6e-50	1	1
ENSORLP00020018016	DEAD	PF00270.29	5.3e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020026793	-	3402	-	ENSORLP00020018060	852 (aa)	-	-
ENSORLT00020026738	-	2448	-	ENSORLP00020018016	815 (aa)	-	-

Gene Model

Click here to download ENSORLG00020000858's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020000858's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020000858	ddx54	53	33.043	ENSORLG00020022308	ddx18	67	33.696

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020000858	ddx54	97	60.936	ENSG00000123064	DDX54	100	88.462	Homo_sapiens
ENSORLG00020000858	ddx54	98	82.388	ENSAPOG00000008602	ddx54	100	82.251	Acanthochromis_polyacanthus
ENSORLG00020000858	ddx54	98	60.976	ENSAMEG00000008775	DDX54	96	60.560	Ailuropoda_melanoleuca
ENSORLG00020000858	ddx54	100	80.716	ENSACIG00000019104	ddx54	100	80.254	Amphilophus_citrinellus
ENSORLG00020000858	ddx54	98	82.012	ENSAOCG00000008449	ddx54	100	82.114	Amphiprion_ocellaris
ENSORLG00020000858	ddx54	98	82.012	ENSAPEG00000014287	ddx54	100	82.114	Amphiprion_percula
ENSORLG00020000858	ddx54	100	81.692	ENSATEG00000018529	ddx54	100	81.808	Anabas_testudineus
ENSORLG00020000858	ddx54	95	63.902	ENSAPLG00000013191	DDX54	100	63.480	Anas_platyrhynchos
ENSORLG00020000858	ddx54	97	64.226	ENSACAG00000004703	DDX54	99	62.824	Anolis_carolinensis
ENSORLG00020000858	ddx54	90	54.534	ENSANAG00000032241	-	95	54.026	Aotus_nancymaae
ENSORLG00020000858	ddx54	100	52.268	ENSANAG00000032761	-	98	51.936	Aotus_nancymaae
ENSORLG00020000858	ddx54	100	81.425	ENSACLG00000013176	ddx54	100	81.425	Astatotilapia_calliptera
ENSORLG00020000858	ddx54	98	74.616	ENSAMXG00000009189	ddx54	100	73.788	Astyanax_mexicanus
ENSORLG00020000858	ddx54	100	60.780	ENSBTAG00000011930	DDX54	93	61.009	Bos_taurus
ENSORLG00020000858	ddx54	82	48.045	WBGene00022378	Y94H6A.5	86	48.045	Caenorhabditis_elegans
ENSORLG00020000858	ddx54	90	63.192	ENSCJAG00000010039	DDX54	83	63.424	Callithrix_jacchus
ENSORLG00020000858	ddx54	66	51.399	ENSCAFG00000009029	DDX54	99	51.313	Canis_familiaris
ENSORLG00020000858	ddx54	98	61.366	ENSCAFG00020017643	DDX54	98	60.669	Canis_lupus_dingo
ENSORLG00020000858	ddx54	98	60.419	ENSCHIG00000026798	DDX54	98	59.748	Capra_hircus
ENSORLG00020000858	ddx54	95	57.762	ENSTSYG00000007898	DDX54	94	57.557	Carlito_syrichta
ENSORLG00020000858	ddx54	95	61.247	ENSCAPG00000001482	DDX54	99	58.566	Cavia_aperea
ENSORLG00020000858	ddx54	98	60.610	ENSCPOG00000020649	DDX54	96	60.468	Cavia_porcellus
ENSORLG00020000858	ddx54	97	61.511	ENSCCAG00000022625	DDX54	98	60.690	Cebus_capucinus
ENSORLG00020000858	ddx54	97	61.502	ENSCATG00000041943	DDX54	98	60.229	Cercocebus_atys
ENSORLG00020000858	ddx54	97	59.977	ENSCLAG00000010748	DDX54	98	59.677	Chinchilla_lanigera
ENSORLG00020000858	ddx54	94	61.232	ENSCSAG00000002432	DDX54	90	61.252	Chlorocebus_sabaeus
ENSORLG00020000858	ddx54	77	61.818	ENSCPBG00000017982	DDX54	85	61.702	Chrysemys_picta_bellii
ENSORLG00020000858	ddx54	92	54.104	ENSCING00000004789	-	98	53.457	Ciona_intestinalis
ENSORLG00020000858	ddx54	89	53.351	ENSCSAVG00000008916	-	98	70.783	Ciona_savignyi
ENSORLG00020000858	ddx54	90	87.234	ENSCANG00000020637	DDX54	99	87.234	Colobus_angolensis_palliatus
ENSORLG00020000858	ddx54	100	60.596	ENSCGRG00001014803	Ddx54	96	61.124	Cricetulus_griseus_chok1gshd
ENSORLG00020000858	ddx54	100	60.412	ENSCGRG00000002827	Ddx54	96	60.981	Cricetulus_griseus_crigri
ENSORLG00020000858	ddx54	98	76.123	ENSCSEG00000016462	ddx54	100	76.334	Cynoglossus_semilaevis
ENSORLG00020000858	ddx54	100	80.533	ENSCVAG00000022404	ddx54	100	79.514	Cyprinodon_variegatus
ENSORLG00020000858	ddx54	98	72.373	ENSDARG00000105286	ddx54	98	72.373	Danio_rerio
ENSORLG00020000858	ddx54	98	60.471	ENSDNOG00000032913	DDX54	98	59.770	Dasypus_novemcinctus
ENSORLG00020000858	ddx54	81	55.761	ENSDORG00000003399	Ddx54	95	55.524	Dipodomys_ordii
ENSORLG00020000858	ddx54	86	56.237	FBgn0052344	CG32344	87	46.988	Drosophila_melanogaster
ENSORLG00020000858	ddx54	50	87.586	ENSETEG00000008430	-	52	87.586	Echinops_telfairi
ENSORLG00020000858	ddx54	82	59.716	ENSEBUG00000008886	ddx54	97	60.438	Eptatretus_burgeri
ENSORLG00020000858	ddx54	88	57.847	ENSEASG00005009501	DDX54	100	54.602	Equus_asinus_asinus
ENSORLG00020000858	ddx54	90	70.642	ENSECAG00000012890	DDX54	98	67.687	Equus_caballus
ENSORLG00020000858	ddx54	60	86.076	ENSEEUG00000008296	-	62	86.076	Erinaceus_europaeus
ENSORLG00020000858	ddx54	100	73.099	ENSELUG00000013533	ddx54	100	72.985	Esox_lucius
ENSORLG00020000858	ddx54	98	60.563	ENSFCAG00000027806	DDX54	98	60.023	Felis_catus
ENSORLG00020000858	ddx54	92	65.404	ENSFALG00000007737	DDX54	100	64.899	Ficedula_albicollis
ENSORLG00020000858	ddx54	87	76.471	ENSFDAG00000019953	DDX54	97	74.279	Fukomys_damarensis
ENSORLG00020000858	ddx54	100	81.163	ENSFHEG00000018425	ddx54	100	80.349	Fundulus_heteroclitus
ENSORLG00020000858	ddx54	96	72.618	ENSGMOG00000011746	ddx54	98	73.129	Gadus_morhua
ENSORLG00020000858	ddx54	95	65.074	ENSGALG00000007490	DDX54	97	64.338	Gallus_gallus
ENSORLG00020000858	ddx54	100	77.791	ENSGAFG00000010336	ddx54	100	77.739	Gambusia_affinis
ENSORLG00020000858	ddx54	98	74.827	ENSGACG00000016793	ddx54	100	75.455	Gasterosteus_aculeatus
ENSORLG00020000858	ddx54	98	64.066	ENSGAGG00000022803	DDX54	100	66.083	Gopherus_agassizii
ENSORLG00020000858	ddx54	97	60.748	ENSGGOG00000010414	DDX54	98	60.205	Gorilla_gorilla
ENSORLG00020000858	ddx54	97	60.638	ENSHGLG00000014411	DDX54	95	60.638	Heterocephalus_glaber_female
ENSORLG00020000858	ddx54	97	60.710	ENSHGLG00100018511	DDX54	95	60.710	Heterocephalus_glaber_male
ENSORLG00020000858	ddx54	100	77.610	ENSHCOG00000019287	ddx54	100	77.842	Hippocampus_comes
ENSORLG00020000858	ddx54	98	73.200	ENSIPUG00000015556	Ddx54	98	73.200	Ictalurus_punctatus
ENSORLG00020000858	ddx54	89	59.897	ENSSTOG00000004068	DDX54	100	60.103	Ictidomys_tridecemlineatus
ENSORLG00020000858	ddx54	98	61.222	ENSJJAG00000015712	Ddx54	97	61.027	Jaculus_jaculus
ENSORLG00020000858	ddx54	100	80.210	ENSKMAG00000017520	ddx54	100	80.280	Kryptolebias_marmoratus
ENSORLG00020000858	ddx54	98	77.427	ENSLBEG00000019480	ddx54	100	77.330	Labrus_bergylta
ENSORLG00020000858	ddx54	96	68.452	ENSLACG00000008944	DDX54	96	68.304	Latimeria_chalumnae
ENSORLG00020000858	ddx54	98	70.956	ENSLOCG00000008485	ddx54	100	70.629	Lepisosteus_oculatus
ENSORLG00020000858	ddx54	90	51.907	ENSLAFG00000027782	DDX54	100	51.422	Loxodonta_africana
ENSORLG00020000858	ddx54	97	61.105	ENSMFAG00000043636	DDX54	98	60.433	Macaca_fascicularis
ENSORLG00020000858	ddx54	97	60.681	ENSMMUG00000021795	DDX54	98	60.478	Macaca_mulatta
ENSORLG00020000858	ddx54	97	54.930	ENSMNEG00000043605	DDX54	98	54.909	Macaca_nemestrina
ENSORLG00020000858	ddx54	97	57.981	ENSMLEG00000038981	DDX54	98	57.714	Mandrillus_leucophaeus
ENSORLG00020000858	ddx54	100	80.716	ENSMAMG00000012784	ddx54	100	79.908	Mastacembelus_armatus
ENSORLG00020000858	ddx54	100	79.250	ENSMZEG00005018773	ddx54	100	79.250	Maylandia_zebra
ENSORLG00020000858	ddx54	94	63.680	ENSMGAG00000009183	DDX54	99	63.183	Meleagris_gallopavo
ENSORLG00020000858	ddx54	98	61.358	ENSMAUG00000011051	Ddx54	96	61.799	Mesocricetus_auratus
ENSORLG00020000858	ddx54	100	60.023	ENSMICG00000012217	DDX54	98	60.460	Microcebus_murinus
ENSORLG00020000858	ddx54	100	60.624	ENSMOCG00000010835	Ddx54	96	61.321	Microtus_ochrogaster
ENSORLG00020000858	ddx54	98	77.924	ENSMMOG00000009634	ddx54	100	77.283	Mola_mola
ENSORLG00020000858	ddx54	95	62.165	ENSMODG00000003413	DDX54	97	61.847	Monodelphis_domestica
ENSORLG00020000858	ddx54	100	81.141	ENSMALG00000022098	ddx54	100	81.141	Monopterus_albus
ENSORLG00020000858	ddx54	97	61.747	MGP_CAROLIEiJ_G0027665	Ddx54	97	61.458	Mus_caroli
ENSORLG00020000858	ddx54	97	61.439	ENSMUSG00000029599	Ddx54	95	62.102	Mus_musculus
ENSORLG00020000858	ddx54	98	61.593	MGP_PahariEiJ_G0024247	Ddx54	96	61.628	Mus_pahari
ENSORLG00020000858	ddx54	97	61.575	MGP_SPRETEiJ_G0028665	Ddx54	97	61.636	Mus_spretus
ENSORLG00020000858	ddx54	98	60.652	ENSMPUG00000002574	DDX54	98	59.770	Mustela_putorius_furo
ENSORLG00020000858	ddx54	97	60.685	ENSNGAG00000021313	Ddx54	95	60.498	Nannospalax_galili
ENSORLG00020000858	ddx54	69	92.118	ENSNBRG00000005588	ddx54	75	92.118	Neolamprologus_brichardi
ENSORLG00020000858	ddx54	97	59.860	ENSNLEG00000000162	DDX54	95	61.019	Nomascus_leucogenys
ENSORLG00020000858	ddx54	81	64.275	ENSMEUG00000015392	DDX54	97	64.749	Notamacropus_eugenii
ENSORLG00020000858	ddx54	88	53.918	ENSOPRG00000012000	DDX54	86	54.029	Ochotona_princeps
ENSORLG00020000858	ddx54	97	58.935	ENSODEG00000014863	DDX54	95	58.817	Octodon_degus
ENSORLG00020000858	ddx54	98	59.043	ENSOCUG00000008932	DDX54	98	58.171	Oryctolagus_cuniculus
ENSORLG00020000858	ddx54	100	99.413	ENSORLG00000007385	ddx54	100	99.413	Oryzias_latipes
ENSORLG00020000858	ddx54	100	99.061	ENSORLG00015006956	ddx54	100	99.061	Oryzias_latipes_hsok
ENSORLG00020000858	ddx54	98	91.169	ENSOMEG00000003663	ddx54	100	91.832	Oryzias_melastigma
ENSORLG00020000858	ddx54	98	61.215	ENSOGAG00000004210	DDX54	96	61.583	Otolemur_garnettii
ENSORLG00020000858	ddx54	98	60.652	ENSOARG00000008363	DDX54	98	59.932	Ovis_aries
ENSORLG00020000858	ddx54	97	59.722	ENSPPAG00000042178	DDX54	98	60.547	Pan_paniscus
ENSORLG00020000858	ddx54	98	58.734	ENSPPRG00000005223	DDX54	98	58.467	Panthera_pardus
ENSORLG00020000858	ddx54	62	84.896	ENSPTIG00000019728	DDX54	82	84.456	Panthera_tigris_altaica
ENSORLG00020000858	ddx54	97	59.930	ENSPTRG00000005483	DDX54	98	60.069	Pan_troglodytes
ENSORLG00020000858	ddx54	97	60.631	ENSPANG00000008883	DDX54	98	60.478	Papio_anubis
ENSORLG00020000858	ddx54	98	73.753	ENSPKIG00000018272	ddx54	98	73.807	Paramormyrops_kingsleyae
ENSORLG00020000858	ddx54	54	77.922	ENSPSIG00000005055	DDX54	95	77.922	Pelodiscus_sinensis
ENSORLG00020000858	ddx54	95	73.030	ENSPMGG00000010988	ddx54	99	73.276	Periophthalmus_magnuspinnatus
ENSORLG00020000858	ddx54	100	60.208	ENSPEMG00000016701	Ddx54	96	61.013	Peromyscus_maniculatus_bairdii
ENSORLG00020000858	ddx54	100	80.742	ENSPFOG00000019822	ddx54	100	80.046	Poecilia_formosa
ENSORLG00020000858	ddx54	100	80.626	ENSPLAG00000004530	ddx54	100	79.930	Poecilia_latipinna
ENSORLG00020000858	ddx54	100	80.510	ENSPMEG00000010803	ddx54	100	79.814	Poecilia_mexicana
ENSORLG00020000858	ddx54	100	80.604	ENSPREG00000014372	ddx54	100	80.093	Poecilia_reticulata
ENSORLG00020000858	ddx54	97	61.150	ENSPPYG00000004984	DDX54	98	60.114	Pongo_abelii
ENSORLG00020000858	ddx54	97	56.228	ENSPCAG00000008462	DDX54	98	56.050	Procavia_capensis
ENSORLG00020000858	ddx54	98	60.748	ENSPCOG00000006050	DDX54	98	60.959	Propithecus_coquereli
ENSORLG00020000858	ddx54	90	82.239	ENSPVAG00000017347	DDX54	91	79.137	Pteropus_vampyrus
ENSORLG00020000858	ddx54	100	71.678	ENSPNAG00000014459	ddx54	96	78.553	Pygocentrus_nattereri
ENSORLG00020000858	ddx54	98	61.655	ENSRNOG00000001377	Ddx54	92	61.305	Rattus_norvegicus
ENSORLG00020000858	ddx54	100	60.751	ENSRBIG00000032535	DDX54	98	60.478	Rhinopithecus_bieti
ENSORLG00020000858	ddx54	100	56.769	ENSRROG00000029557	DDX54	98	57.224	Rhinopithecus_roxellana
ENSORLG00020000858	ddx54	91	35.076	YDL031W	-	79	36.740	Saccharomyces_cerevisiae
ENSORLG00020000858	ddx54	97	61.939	ENSSBOG00000028194	DDX54	98	61.034	Saimiri_boliviensis_boliviensis
ENSORLG00020000858	ddx54	95	58.753	ENSSHAG00000015646	DDX54	99	58.724	Sarcophilus_harrisii
ENSORLG00020000858	ddx54	97	76.139	ENSSFOG00015014981	ddx54	100	74.650	Scleropages_formosus
ENSORLG00020000858	ddx54	98	77.416	ENSSMAG00000003210	ddx54	100	78.096	Scophthalmus_maximus
ENSORLG00020000858	ddx54	96	78.867	ENSSDUG00000004474	ddx54	100	78.905	Seriola_dumerili
ENSORLG00020000858	ddx54	98	78.978	ENSSLDG00000010380	ddx54	100	79.133	Seriola_lalandi_dorsalis
ENSORLG00020000858	ddx54	97	65.906	ENSSPUG00000014141	DDX54	96	65.343	Sphenodon_punctatus
ENSORLG00020000858	ddx54	93	77.193	ENSSPAG00000022918	ddx54	97	76.622	Stegastes_partitus
ENSORLG00020000858	ddx54	98	61.449	ENSSSCG00000009876	DDX54	98	60.460	Sus_scrofa
ENSORLG00020000858	ddx54	94	63.280	ENSTGUG00000009126	DDX54	100	63.490	Taeniopygia_guttata
ENSORLG00020000858	ddx54	100	77.714	ENSTRUG00000014939	ddx54	100	77.829	Takifugu_rubripes
ENSORLG00020000858	ddx54	100	75.260	ENSTNIG00000009037	ddx54	100	75.320	Tetraodon_nigroviridis
ENSORLG00020000858	ddx54	73	79.259	ENSTBEG00000003783	DDX54	76	79.259	Tupaia_belangeri
ENSORLG00020000858	ddx54	98	58.673	ENSTTRG00000016678	DDX54	98	58.257	Tursiops_truncatus
ENSORLG00020000858	ddx54	100	59.773	ENSUAMG00000028387	DDX54	100	60.047	Ursus_americanus
ENSORLG00020000858	ddx54	81	79.750	ENSUMAG00000010245	DDX54	94	80.159	Ursus_maritimus
ENSORLG00020000858	ddx54	98	61.575	ENSVVUG00000010212	DDX54	98	60.669	Vulpes_vulpes
ENSORLG00020000858	ddx54	99	64.195	ENSXETG00000016410	ddx54	100	64.195	Xenopus_tropicalis
ENSORLG00020000858	ddx54	100	81.008	ENSXCOG00000002909	ddx54	100	80.891	Xiphophorus_couchianus
ENSORLG00020000858	ddx54	100	81.185	ENSXMAG00000005312	ddx54	100	81.141	Xiphophorus_maculatus