EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020000867 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: si:dkey-16l2.16
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 5165 bases
Position: chr8:2069711-2074875
Accession: ZDB-GENE-141219-36
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020031913	MMR_HSR1	PF01926.23	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020024381	-	633	-	ENSORLP00020031913	210 (aa)	-	-

Gene Model

Click here to download ENSORLG00020000867's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020000867's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020000867	si:dkey-16l2.16	85	41.579	ENSORLG00020012685	zgc:101559	82	41.579
ENSORLG00020000867	si:dkey-16l2.16	56	31.496	ENSORLG00020004500	arfrp1	61	31.496
ENSORLG00020000867	si:dkey-16l2.16	83	42.938	ENSORLG00020011590	rab18b	86	42.938
ENSORLG00020000867	si:dkey-16l2.16	82	47.701	ENSORLG00020018259	rab15	82	47.701
ENSORLG00020000867	si:dkey-16l2.16	72	32.484	ENSORLG00020005150	rhebl1	83	32.484
ENSORLG00020000867	si:dkey-16l2.16	80	33.526	ENSORLG00020002801	rheb	90	33.526
ENSORLG00020000867	si:dkey-16l2.16	79	34.731	ENSORLG00020013690	zgc:55558	89	34.731
ENSORLG00020000867	si:dkey-16l2.16	94	32.195	ENSORLG00020010041	rab34a	77	32.195
ENSORLG00020000867	si:dkey-16l2.16	97	40.686	ENSORLG00020013719	rab25b	98	39.899
ENSORLG00020000867	si:dkey-16l2.16	86	39.891	ENSORLG00020005131	rab12	75	41.379
ENSORLG00020000867	si:dkey-16l2.16	98	33.493	ENSORLG00020001816	rab6a	98	33.493
ENSORLG00020000867	si:dkey-16l2.16	80	31.429	ENSORLG00020010114	-	93	30.857
ENSORLG00020000867	si:dkey-16l2.16	83	36.111	ENSORLG00020019465	si:dkey-13a21.4	88	36.111
ENSORLG00020000867	si:dkey-16l2.16	82	44.253	ENSORLG00020013747	rab11al	81	44.253
ENSORLG00020000867	si:dkey-16l2.16	86	31.771	ENSORLG00020006790	dnajc27	71	31.771
ENSORLG00020000867	si:dkey-16l2.16	95	32.039	ENSORLG00020000483	rab9a	97	32.039
ENSORLG00020000867	si:dkey-16l2.16	74	33.544	ENSORLG00020008129	hras	83	33.544
ENSORLG00020000867	si:dkey-16l2.16	97	39.234	ENSORLG00020019393	rab11bb	96	39.234
ENSORLG00020000867	si:dkey-16l2.16	82	41.714	ENSORLG00020013895	rab42a	80	41.714
ENSORLG00020000867	si:dkey-16l2.16	97	32.381	ENSORLG00020008512	-	99	32.381
ENSORLG00020000867	si:dkey-16l2.16	80	41.667	ENSORLG00020020922	rab5aa	78	41.667
ENSORLG00020000867	si:dkey-16l2.16	83	35.000	ENSORLG00020009158	rab9b	85	35.000
ENSORLG00020000867	si:dkey-16l2.16	83	35.165	ENSORLG00020005240	RAB29	89	35.165
ENSORLG00020000867	si:dkey-16l2.16	94	33.168	ENSORLG00020016139	rab34b	73	33.168
ENSORLG00020000867	si:dkey-16l2.16	73	35.065	ENSORLG00020020220	rab23	78	35.000
ENSORLG00020000867	si:dkey-16l2.16	70	43.871	ENSORLG00020013870	-	64	43.871
ENSORLG00020000867	si:dkey-16l2.16	95	35.500	ENSORLG00020008388	rab5c	89	35.500
ENSORLG00020000867	si:dkey-16l2.16	80	38.824	ENSORLG00020020277	si:dkey-34d22.5	77	38.824
ENSORLG00020000867	si:dkey-16l2.16	83	30.319	ENSORLG00020001721	rabl2	81	30.319
ENSORLG00020000867	si:dkey-16l2.16	73	36.646	ENSORLG00020010772	rab6ba	75	36.646
ENSORLG00020000867	si:dkey-16l2.16	82	45.087	ENSORLG00020004905	RAB15	83	45.087
ENSORLG00020000867	si:dkey-16l2.16	77	41.463	ENSORLG00020018986	rab14	75	38.650
ENSORLG00020000867	si:dkey-16l2.16	94	34.171	ENSORLG00020000604	rab41	91	34.171
ENSORLG00020000867	si:dkey-16l2.16	80	44.444	ENSORLG00020008333	rab18a	83	44.444
ENSORLG00020000867	si:dkey-16l2.16	94	36.000	ENSORLG00020015717	-	78	36.000
ENSORLG00020000867	si:dkey-16l2.16	98	51.942	ENSORLG00020000892	rab1ab	99	51.942
ENSORLG00020000867	si:dkey-16l2.16	90	39.409	ENSORLG00020018196	rab33ba	84	39.409
ENSORLG00020000867	si:dkey-16l2.16	82	33.523	ENSORLG00020005258	rerg	87	33.523
ENSORLG00020000867	si:dkey-16l2.16	86	46.154	ENSORLG00020009535	-	91	46.154
ENSORLG00020000867	si:dkey-16l2.16	56	30.252	ENSORLG00020012894	arl3l2	61	30.252
ENSORLG00020000867	si:dkey-16l2.16	79	37.059	ENSORLG00020013337	rab6bb	85	37.059
ENSORLG00020000867	si:dkey-16l2.16	97	39.713	ENSORLG00020020844	RAB11B	96	39.713
ENSORLG00020000867	si:dkey-16l2.16	77	48.765	ENSORLG00020021663	rab3db	75	47.929
ENSORLG00020000867	si:dkey-16l2.16	55	30.508	ENSORLG00020011342	arl4aa	62	30.508
ENSORLG00020000867	si:dkey-16l2.16	87	31.351	ENSORLG00020020961	kras	95	31.351
ENSORLG00020000867	si:dkey-16l2.16	76	60.248	ENSORLG00020021697	-	80	60.248
ENSORLG00020000867	si:dkey-16l2.16	84	46.629	ENSORLG00020015288	rab30	88	46.629
ENSORLG00020000867	si:dkey-16l2.16	94	36.946	ENSORLG00020005952	rab7a	93	36.946
ENSORLG00020000867	si:dkey-16l2.16	73	33.333	ENSORLG00020012306	si:ch73-116o1.2	85	31.111
ENSORLG00020000867	si:dkey-16l2.16	75	43.558	ENSORLG00020020266	rab33a	59	43.558
ENSORLG00020000867	si:dkey-16l2.16	99	38.679	ENSORLG00020020811	rab25a	69	38.679
ENSORLG00020000867	si:dkey-16l2.16	97	38.278	ENSORLG00020020816	rab11ba	96	38.278
ENSORLG00020000867	si:dkey-16l2.16	77	43.902	ENSORLG00020019269	RAB39B	77	43.902
ENSORLG00020000867	si:dkey-16l2.16	77	59.509	ENSORLG00020021071	zgc:171927	77	59.509
ENSORLG00020000867	si:dkey-16l2.16	75	44.654	ENSORLG00020020035	rab2a	75	44.654

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020000867	si:dkey-16l2.16	99	89.952	ENSAPOG00000008263	si:dkey-16l2.16	100	89.952	Acanthochromis_polyacanthus
ENSORLG00020000867	si:dkey-16l2.16	99	90.909	ENSAOCG00000016825	si:dkey-16l2.16	100	90.909	Amphiprion_ocellaris
ENSORLG00020000867	si:dkey-16l2.16	99	90.909	ENSAPEG00000006500	si:dkey-16l2.16	100	90.909	Amphiprion_percula
ENSORLG00020000867	si:dkey-16l2.16	99	85.646	ENSATEG00000019238	si:dkey-16l2.16	100	88.995	Anabas_testudineus
ENSORLG00020000867	si:dkey-16l2.16	99	88.995	ENSACLG00000018721	si:dkey-16l2.16	100	88.995	Astatotilapia_calliptera
ENSORLG00020000867	si:dkey-16l2.16	99	89.474	ENSAMXG00000038243	si:dkey-16l2.16	100	89.474	Astyanax_mexicanus
ENSORLG00020000867	si:dkey-16l2.16	56	93.220	ENSCSEG00000009988	si:dkey-16l2.16	90	93.220	Cynoglossus_semilaevis
ENSORLG00020000867	si:dkey-16l2.16	99	90.431	ENSCVAG00000003537	si:dkey-16l2.16	100	90.431	Cyprinodon_variegatus
ENSORLG00020000867	si:dkey-16l2.16	99	84.211	ENSDARG00000037967	si:dkey-16l2.16	99	94.068	Danio_rerio
ENSORLG00020000867	si:dkey-16l2.16	99	84.058	ENSELUG00000023247	si:dkey-16l2.16	99	84.058	Esox_lucius
ENSORLG00020000867	si:dkey-16l2.16	58	90.909	ENSFHEG00000000767	si:dkey-16l2.16	78	90.909	Fundulus_heteroclitus
ENSORLG00020000867	si:dkey-16l2.16	77	81.481	ENSGMOG00000015174	si:dkey-16l2.16	99	81.481	Gadus_morhua
ENSORLG00020000867	si:dkey-16l2.16	99	84.211	ENSGAFG00000005388	si:dkey-16l2.16	100	84.211	Gambusia_affinis
ENSORLG00020000867	si:dkey-16l2.16	99	89.048	ENSGACG00000014915	si:dkey-16l2.16	98	89.048	Gasterosteus_aculeatus
ENSORLG00020000867	si:dkey-16l2.16	99	89.474	ENSHBUG00000019261	si:dkey-16l2.16	100	89.474	Haplochromis_burtoni
ENSORLG00020000867	si:dkey-16l2.16	99	86.603	ENSHCOG00000006538	si:dkey-16l2.16	100	89.474	Hippocampus_comes
ENSORLG00020000867	si:dkey-16l2.16	99	84.689	ENSKMAG00000003494	si:dkey-16l2.16	100	88.517	Kryptolebias_marmoratus
ENSORLG00020000867	si:dkey-16l2.16	99	90.909	ENSLBEG00000007681	si:dkey-16l2.16	100	90.909	Labrus_bergylta
ENSORLG00020000867	si:dkey-16l2.16	99	88.995	ENSMAMG00000019230	si:dkey-16l2.16	100	88.995	Mastacembelus_armatus
ENSORLG00020000867	si:dkey-16l2.16	99	88.995	ENSMZEG00005002081	si:dkey-16l2.16	100	88.995	Maylandia_zebra
ENSORLG00020000867	si:dkey-16l2.16	98	87.379	ENSMMOG00000020140	si:dkey-16l2.16	97	90.291	Mola_mola
ENSORLG00020000867	si:dkey-16l2.16	100	87.678	ENSMALG00000014727	si:dkey-16l2.16	100	87.678	Monopterus_albus
ENSORLG00020000867	si:dkey-16l2.16	99	88.517	ENSNBRG00000008930	si:dkey-16l2.16	100	88.517	Neolamprologus_brichardi
ENSORLG00020000867	si:dkey-16l2.16	99	88.995	ENSONIG00000009443	si:dkey-16l2.16	100	88.995	Oreochromis_niloticus
ENSORLG00020000867	si:dkey-16l2.16	100	100.000	ENSORLG00000001098	si:dkey-16l2.16	100	100.000	Oryzias_latipes
ENSORLG00020000867	si:dkey-16l2.16	99	96.635	ENSOMEG00000015474	si:dkey-16l2.16	100	96.635	Oryzias_melastigma
ENSORLG00020000867	si:dkey-16l2.16	99	84.211	ENSPKIG00000005686	-	100	87.560	Paramormyrops_kingsleyae
ENSORLG00020000867	si:dkey-16l2.16	99	77.033	ENSPKIG00000018888	si:dkey-16l2.16	100	77.033	Paramormyrops_kingsleyae
ENSORLG00020000867	si:dkey-16l2.16	99	87.560	ENSPMGG00000000751	si:dkey-16l2.16	100	90.431	Periophthalmus_magnuspinnatus
ENSORLG00020000867	si:dkey-16l2.16	99	85.167	ENSPFOG00000004746	si:dkey-16l2.16	100	85.167	Poecilia_formosa
ENSORLG00020000867	si:dkey-16l2.16	99	84.689	ENSPLAG00000021043	si:dkey-16l2.16	100	84.689	Poecilia_latipinna
ENSORLG00020000867	si:dkey-16l2.16	99	85.167	ENSPMEG00000007165	si:dkey-16l2.16	100	85.167	Poecilia_mexicana
ENSORLG00020000867	si:dkey-16l2.16	99	84.689	ENSPREG00000005323	si:dkey-16l2.16	100	84.689	Poecilia_reticulata
ENSORLG00020000867	si:dkey-16l2.16	99	89.474	ENSPNYG00000009490	si:dkey-16l2.16	100	89.474	Pundamilia_nyererei
ENSORLG00020000867	si:dkey-16l2.16	99	89.474	ENSPNAG00000018986	si:dkey-16l2.16	100	89.474	Pygocentrus_nattereri
ENSORLG00020000867	si:dkey-16l2.16	99	75.845	ENSSFOG00015006414	-	99	75.845	Scleropages_formosus
ENSORLG00020000867	si:dkey-16l2.16	99	87.560	ENSSFOG00015021448	-	100	87.560	Scleropages_formosus
ENSORLG00020000867	si:dkey-16l2.16	99	79.524	ENSSMAG00000011769	si:dkey-16l2.16	94	83.333	Scophthalmus_maximus
ENSORLG00020000867	si:dkey-16l2.16	99	89.952	ENSSDUG00000005719	si:dkey-16l2.16	100	89.952	Seriola_dumerili
ENSORLG00020000867	si:dkey-16l2.16	99	89.952	ENSSLDG00000003631	si:dkey-16l2.16	100	89.952	Seriola_lalandi_dorsalis
ENSORLG00020000867	si:dkey-16l2.16	99	90.909	ENSSPAG00000006302	si:dkey-16l2.16	100	90.909	Stegastes_partitus
ENSORLG00020000867	si:dkey-16l2.16	99	88.995	ENSTRUG00000025076	si:dkey-16l2.16	94	95.798	Takifugu_rubripes
ENSORLG00020000867	si:dkey-16l2.16	99	89.952	ENSTNIG00000011300	si:dkey-16l2.16	100	89.952	Tetraodon_nigroviridis
ENSORLG00020000867	si:dkey-16l2.16	99	84.689	ENSXMAG00000021767	si:dkey-16l2.16	100	84.689	Xiphophorus_maculatus