EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020000910 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.3
Alias: -
Full Name: si:ch211-153b23.3
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 3237 bases
Position: chr10:16434704-16437940
Accession: ZDB-GENE-141216-408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020009019	Sua5_yciO_yrdC	PF01300.18	1.2e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020000206	-	2502	-	ENSORLP00020009019	834 (aa)	-	-

Gene Model

Click here to download ENSORLG00020000910's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020000910's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020000910	si:ch211-153b23.3	58	32.389	ENSAPOG00000006178	si:ch211-153b23.4	56	32.389	Acanthochromis_polyacanthus
ENSORLG00020000910	si:ch211-153b23.3	58	32.389	ENSAPOG00000006144	si:ch211-153b23.4	57	32.389	Acanthochromis_polyacanthus
ENSORLG00020000910	si:ch211-153b23.3	100	71.278	ENSACIG00000006968	si:ch211-153b23.3	97	71.278	Amphilophus_citrinellus
ENSORLG00020000910	si:ch211-153b23.3	100	82.964	ENSAOCG00000010974	si:ch211-153b23.3	97	82.964	Amphiprion_ocellaris
ENSORLG00020000910	si:ch211-153b23.3	100	82.614	ENSAPEG00000014700	si:ch211-153b23.3	97	82.614	Amphiprion_percula
ENSORLG00020000910	si:ch211-153b23.3	100	78.089	ENSATEG00000004956	si:ch211-153b23.3	97	78.089	Anabas_testudineus
ENSORLG00020000910	si:ch211-153b23.3	100	78.664	ENSACLG00000005894	si:ch211-153b23.3	97	78.664	Astatotilapia_calliptera
ENSORLG00020000910	si:ch211-153b23.3	100	71.445	ENSAMXG00000038564	si:ch211-153b23.3	97	71.445	Astyanax_mexicanus
ENSORLG00020000910	si:ch211-153b23.3	100	76.251	ENSCSEG00000014853	si:ch211-153b23.3	97	76.251	Cynoglossus_semilaevis
ENSORLG00020000910	si:ch211-153b23.3	100	80.445	ENSCVAG00000021124	si:ch211-153b23.3	97	80.445	Cyprinodon_variegatus
ENSORLG00020000910	si:ch211-153b23.3	75	30.408	ENSCVAG00000021145	si:ch211-153b23.4	77	30.564	Cyprinodon_variegatus
ENSORLG00020000910	si:ch211-153b23.3	100	69.686	ENSDARG00000104919	si:ch211-153b23.3	97	69.686	Danio_rerio
ENSORLG00020000910	si:ch211-153b23.3	79	88.235	ENSELUG00000004912	si:ch211-153b23.3	96	88.235	Esox_lucius
ENSORLG00020000910	si:ch211-153b23.3	100	81.499	ENSFHEG00000010030	si:ch211-153b23.3	97	81.499	Fundulus_heteroclitus
ENSORLG00020000910	si:ch211-153b23.3	72	30.244	ENSFHEG00000010001	si:ch211-153b23.4	74	30.407	Fundulus_heteroclitus
ENSORLG00020000910	si:ch211-153b23.3	100	80.913	ENSGAFG00000007455	si:ch211-153b23.3	97	80.913	Gambusia_affinis
ENSORLG00020000910	si:ch211-153b23.3	100	78.923	ENSHBUG00000001760	si:ch211-153b23.3	97	78.923	Haplochromis_burtoni
ENSORLG00020000910	si:ch211-153b23.3	74	30.880	ENSHBUG00000000013	si:ch211-153b23.4	80	30.880	Haplochromis_burtoni
ENSORLG00020000910	si:ch211-153b23.3	100	71.040	ENSIPUG00000015213	si:ch211-153b23.3	97	71.040	Ictalurus_punctatus
ENSORLG00020000910	si:ch211-153b23.3	100	80.211	ENSKMAG00000006792	si:ch211-153b23.3	97	80.211	Kryptolebias_marmoratus
ENSORLG00020000910	si:ch211-153b23.3	100	79.487	ENSLBEG00000026324	si:ch211-153b23.3	97	79.487	Labrus_bergylta
ENSORLG00020000910	si:ch211-153b23.3	94	56.436	ENSLACG00000005800	-	96	56.227	Latimeria_chalumnae
ENSORLG00020000910	si:ch211-153b23.3	82	56.757	ENSLOCG00000015063	si:ch211-153b23.3	98	56.757	Lepisosteus_oculatus
ENSORLG00020000910	si:ch211-153b23.3	72	30.064	ENSMAMG00000009277	si:ch211-153b23.4	71	30.064	Mastacembelus_armatus
ENSORLG00020000910	si:ch211-153b23.3	100	78.322	ENSMAMG00000009328	si:ch211-153b23.3	97	78.322	Mastacembelus_armatus
ENSORLG00020000910	si:ch211-153b23.3	100	78.546	ENSMZEG00005011450	si:ch211-153b23.3	97	78.546	Maylandia_zebra
ENSORLG00020000910	si:ch211-153b23.3	74	30.794	ENSMZEG00005011433	si:ch211-153b23.4	74	30.794	Maylandia_zebra
ENSORLG00020000910	si:ch211-153b23.3	61	61.180	ENSMGAG00000005489	-	93	61.180	Meleagris_gallopavo
ENSORLG00020000910	si:ch211-153b23.3	100	77.960	ENSMMOG00000004436	si:ch211-153b23.3	97	77.960	Mola_mola
ENSORLG00020000910	si:ch211-153b23.3	72	30.179	ENSMMOG00000004425	si:ch211-153b23.4	74	30.179	Mola_mola
ENSORLG00020000910	si:ch211-153b23.3	74	30.794	ENSNBRG00000013392	si:ch211-153b23.4	76	30.794	Neolamprologus_brichardi
ENSORLG00020000910	si:ch211-153b23.3	100	78.781	ENSNBRG00000013370	si:ch211-153b23.3	97	78.781	Neolamprologus_brichardi
ENSORLG00020000910	si:ch211-153b23.3	72	30.882	ENSONIG00000017875	si:ch211-153b23.4	68	30.882	Oreochromis_niloticus
ENSORLG00020000910	si:ch211-153b23.3	100	97.506	ENSORLG00000006161	si:ch211-153b23.3	97	97.506	Oryzias_latipes
ENSORLG00020000910	si:ch211-153b23.3	100	97.847	ENSORLG00015003698	si:ch211-153b23.3	100	97.847	Oryzias_latipes_hsok
ENSORLG00020000910	si:ch211-153b23.3	100	90.629	ENSOMEG00000007661	si:ch211-153b23.3	97	90.629	Oryzias_melastigma
ENSORLG00020000910	si:ch211-153b23.3	99	49.599	ENSPKIG00000021029	-	96	49.714	Paramormyrops_kingsleyae
ENSORLG00020000910	si:ch211-153b23.3	100	71.564	ENSPKIG00000022450	si:ch211-153b23.3	100	71.564	Paramormyrops_kingsleyae
ENSORLG00020000910	si:ch211-153b23.3	67	32.042	ENSPKIG00000014429	si:ch211-153b23.4	66	32.042	Paramormyrops_kingsleyae
ENSORLG00020000910	si:ch211-153b23.3	77	76.949	ENSPMGG00000001311	si:ch211-153b23.3	89	76.949	Periophthalmus_magnuspinnatus
ENSORLG00020000910	si:ch211-153b23.3	100	81.206	ENSPFOG00000012289	si:ch211-153b23.3	97	81.206	Poecilia_formosa
ENSORLG00020000910	si:ch211-153b23.3	100	81.871	ENSPLAG00000016320	si:ch211-153b23.3	97	81.871	Poecilia_latipinna
ENSORLG00020000910	si:ch211-153b23.3	100	82.201	ENSPMEG00000008884	si:ch211-153b23.3	97	82.201	Poecilia_mexicana
ENSORLG00020000910	si:ch211-153b23.3	100	78.923	ENSPNYG00000000251	si:ch211-153b23.3	97	78.923	Pundamilia_nyererei
ENSORLG00020000910	si:ch211-153b23.3	74	30.794	ENSPNYG00000000250	si:ch211-153b23.4	74	30.794	Pundamilia_nyererei
ENSORLG00020000910	si:ch211-153b23.3	100	72.547	ENSPNAG00000019592	si:ch211-153b23.3	97	72.547	Pygocentrus_nattereri
ENSORLG00020000910	si:ch211-153b23.3	100	71.009	ENSSFOG00015010910	si:ch211-153b23.3	97	71.009	Scleropages_formosus
ENSORLG00020000910	si:ch211-153b23.3	69	50.336	ENSSFOG00015009030	-	92	50.336	Scleropages_formosus
ENSORLG00020000910	si:ch211-153b23.3	100	80.513	ENSSMAG00000005446	si:ch211-153b23.3	98	80.513	Scophthalmus_maximus
ENSORLG00020000910	si:ch211-153b23.3	100	80.442	ENSSLDG00000008629	si:ch211-153b23.3	97	80.442	Seriola_lalandi_dorsalis
ENSORLG00020000910	si:ch211-153b23.3	53	33.188	ENSTGUG00000005499	-	54	32.969	Taeniopygia_guttata
ENSORLG00020000910	si:ch211-153b23.3	99	75.209	ENSTRUG00000020530	si:ch211-153b23.3	97	75.685	Takifugu_rubripes
ENSORLG00020000910	si:ch211-153b23.3	92	84.647	ENSTNIG00000008962	si:ch211-153b23.3	97	84.647	Tetraodon_nigroviridis
ENSORLG00020000910	si:ch211-153b23.3	72	30.278	ENSXMAG00000009416	-	70	30.442	Xiphophorus_maculatus
ENSORLG00020000910	si:ch211-153b23.3	100	82.151	ENSXMAG00000029318	si:ch211-153b23.3	97	82.151	Xiphophorus_maculatus