EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020000991 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 12546 bases
Position: chr19:6522233-6534778
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020015161	PAM2	PF07145.15	2.3e-05	1	1
ENSORLP00020015161	LsmAD	PF06741.13	4.2e-17	1	1
ENSORLP00020015161	SM-ATX	PF14438.6	2.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020033345	-	4997	-	ENSORLP00020015161	1042 (aa)	-	-

Gene Model

Click here to download ENSORLG00020000991's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020000991's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020000991	-	95	43.791	ENSG00000168488	ATXN2L	100	63.158	Homo_sapiens
ENSORLG00020000991	-	100	81.853	ENSAPOG00000021412	-	100	81.981	Acanthochromis_polyacanthus
ENSORLG00020000991	-	81	55.256	ENSACIG00000024435	atxn2l	92	56.065	Amphilophus_citrinellus
ENSORLG00020000991	-	79	79.052	ENSACIG00000014731	-	96	79.052	Amphilophus_citrinellus
ENSORLG00020000991	-	88	83.136	ENSAOCG00000002581	-	100	83.173	Amphiprion_ocellaris
ENSORLG00020000991	-	100	83.208	ENSAPEG00000011038	-	100	83.333	Amphiprion_percula
ENSORLG00020000991	-	100	80.414	ENSATEG00000019382	-	100	80.132	Anabas_testudineus
ENSORLG00020000991	-	77	49.184	ENSATEG00000017689	atxn2l	98	49.658	Anabas_testudineus
ENSORLG00020000991	-	52	40.171	ENSACAG00000005425	ATXN2L	62	37.539	Anolis_carolinensis
ENSORLG00020000991	-	78	45.994	ENSANAG00000026257	ATXN2L	53	39.139	Aotus_nancymaae
ENSORLG00020000991	-	60	62.857	ENSACLG00000016900	atxn2l	93	64.643	Astatotilapia_calliptera
ENSORLG00020000991	-	100	80.813	ENSACLG00000009975	-	100	79.962	Astatotilapia_calliptera
ENSORLG00020000991	-	89	60.440	ENSAMXG00000003332	atxn2l	99	60.440	Astyanax_mexicanus
ENSORLG00020000991	-	97	60.452	ENSAMXG00000020362	-	100	60.685	Astyanax_mexicanus
ENSORLG00020000991	-	75	65.299	ENSCATG00000021354	ATXN2L	86	65.299	Cercocebus_atys
ENSORLG00020000991	-	87	41.588	ENSCPBG00000003859	ATXN2L	58	57.600	Chrysemys_picta_bellii
ENSORLG00020000991	-	95	40.896	ENSCANG00000043625	ATXN2L	55	39.646	Colobus_angolensis_palliatus
ENSORLG00020000991	-	92	43.071	ENSCGRG00000001500	Atxn2l	55	40.551	Cricetulus_griseus_crigri
ENSORLG00020000991	-	58	76.260	ENSCSEG00000008530	-	98	77.398	Cynoglossus_semilaevis
ENSORLG00020000991	-	98	80.077	ENSCVAG00000015825	-	100	79.155	Cyprinodon_variegatus
ENSORLG00020000991	-	99	56.839	ENSDARG00000011597	atxn2l	99	57.328	Danio_rerio
ENSORLG00020000991	-	88	64.979	ENSELUG00000022915	-	91	63.722	Esox_lucius
ENSORLG00020000991	-	99	57.406	ENSELUG00000023740	atxn2l	99	57.183	Esox_lucius
ENSORLG00020000991	-	65	70.513	ENSFHEG00000004491	-	84	70.228	Fundulus_heteroclitus
ENSORLG00020000991	-	58	61.111	ENSGMOG00000000316	atxn2l	79	64.286	Gadus_morhua
ENSORLG00020000991	-	89	75.000	ENSGMOG00000006016	-	100	65.646	Gadus_morhua
ENSORLG00020000991	-	70	77.205	ENSGAFG00000019364	-	99	76.798	Gambusia_affinis
ENSORLG00020000991	-	98	75.965	ENSGACG00000007446	-	100	76.931	Gasterosteus_aculeatus
ENSORLG00020000991	-	59	50.350	ENSGGOG00000036669	-	63	50.350	Gorilla_gorilla
ENSORLG00020000991	-	100	80.624	ENSHBUG00000007997	-	100	79.773	Haplochromis_burtoni
ENSORLG00020000991	-	86	56.373	ENSHBUG00000013425	atxn2l	97	50.337	Haplochromis_burtoni
ENSORLG00020000991	-	51	37.128	ENSHGLG00100000705	ATXN2L	51	35.791	Heterocephalus_glaber_male
ENSORLG00020000991	-	80	80.734	ENSHCOG00000017587	-	100	80.734	Hippocampus_comes
ENSORLG00020000991	-	99	57.623	ENSIPUG00000001761	atxn2l	99	57.626	Ictalurus_punctatus
ENSORLG00020000991	-	88	42.165	ENSJJAG00000005629	Atxn2l	99	42.813	Jaculus_jaculus
ENSORLG00020000991	-	98	80.620	ENSKMAG00000021450	-	100	80.136	Kryptolebias_marmoratus
ENSORLG00020000991	-	77	57.219	ENSLBEG00000006525	atxn2l	86	57.219	Labrus_bergylta
ENSORLG00020000991	-	100	79.531	ENSLBEG00000022720	-	100	79.343	Labrus_bergylta
ENSORLG00020000991	-	80	60.339	ENSLACG00000006023	ATXN2L	64	38.174	Latimeria_chalumnae
ENSORLG00020000991	-	94	43.474	ENSMFAG00000030590	ATXN2L	50	38.394	Macaca_fascicularis
ENSORLG00020000991	-	100	79.528	ENSMAMG00000013005	-	100	79.434	Mastacembelus_armatus
ENSORLG00020000991	-	100	80.813	ENSMZEG00005013869	-	100	79.962	Maylandia_zebra
ENSORLG00020000991	-	56	60.616	ENSMZEG00005001258	atxn2l	94	64.643	Maylandia_zebra
ENSORLG00020000991	-	95	43.478	ENSMICG00000010608	ATXN2L	97	42.383	Microcebus_murinus
ENSORLG00020000991	-	95	42.722	ENSMOCG00000020882	Atxn2l	55	40.237	Microtus_ochrogaster
ENSORLG00020000991	-	93	71.795	ENSMMOG00000001440	-	99	71.443	Mola_mola
ENSORLG00020000991	-	85	76.513	ENSMALG00000008430	-	93	80.000	Monopterus_albus
ENSORLG00020000991	-	96	42.573	MGP_CAROLIEiJ_G0030450	Atxn2l	77	67.836	Mus_caroli
ENSORLG00020000991	-	96	42.239	ENSMUSG00000032637	Atxn2l	77	67.836	Mus_musculus
ENSORLG00020000991	-	96	42.333	MGP_SPRETEiJ_G0031564	Atxn2l	77	67.836	Mus_spretus
ENSORLG00020000991	-	68	49.116	ENSNBRG00000020833	-	97	47.765	Neolamprologus_brichardi
ENSORLG00020000991	-	80	49.035	ENSNLEG00000033414	-	87	49.035	Nomascus_leucogenys
ENSORLG00020000991	-	84	67.407	ENSONIG00000009388	atxn2l	99	69.630	Oreochromis_niloticus
ENSORLG00020000991	-	98	80.966	ENSONIG00000011478	-	100	80.290	Oreochromis_niloticus
ENSORLG00020000991	-	52	33.059	ENSOANG00000013115	ATXN2L	55	34.039	Ornithorhynchus_anatinus
ENSORLG00020000991	-	100	98.944	ENSORLG00000006059	-	100	98.944	Oryzias_latipes
ENSORLG00020000991	-	100	98.656	ENSORLG00015014174	-	100	98.656	Oryzias_latipes_hsok
ENSORLG00020000991	-	100	93.212	ENSOMEG00000021118	-	100	93.212	Oryzias_melastigma
ENSORLG00020000991	-	82	52.174	ENSPPAG00000036236	-	86	54.514	Pan_paniscus
ENSORLG00020000991	-	71	78.237	ENSPMGG00000014821	-	96	78.238	Periophthalmus_magnuspinnatus
ENSORLG00020000991	-	95	42.803	ENSPEMG00000019231	Atxn2l	93	41.595	Peromyscus_maniculatus_bairdii
ENSORLG00020000991	-	98	79.227	ENSPFOG00000005935	-	100	79.034	Poecilia_formosa
ENSORLG00020000991	-	98	79.614	ENSPLAG00000017094	-	100	79.420	Poecilia_latipinna
ENSORLG00020000991	-	98	79.130	ENSPMEG00000017227	-	100	78.937	Poecilia_mexicana
ENSORLG00020000991	-	98	80.097	ENSPREG00000023090	-	100	79.807	Poecilia_reticulata
ENSORLG00020000991	-	76	42.883	ENSPPYG00000017765	-	53	60.075	Pongo_abelii
ENSORLG00020000991	-	94	43.474	ENSPCOG00000024791	ATXN2L	86	42.474	Propithecus_coquereli
ENSORLG00020000991	-	83	41.948	ENSPVAG00000003958	ATXN2L	71	54.982	Pteropus_vampyrus
ENSORLG00020000991	-	59	63.701	ENSPNYG00000012482	atxn2l	94	54.444	Pundamilia_nyererei
ENSORLG00020000991	-	100	80.813	ENSPNYG00000017058	-	100	79.962	Pundamilia_nyererei
ENSORLG00020000991	-	99	58.112	ENSPNAG00000014538	atxn2l	99	57.615	Pygocentrus_nattereri
ENSORLG00020000991	-	100	59.722	ENSPNAG00000023685	-	100	58.440	Pygocentrus_nattereri
ENSORLG00020000991	-	94	37.247	ENSRBIG00000036712	ATXN2L	73	67.355	Rhinopithecus_bieti
ENSORLG00020000991	-	94	43.269	ENSSBOG00000025782	ATXN2L	53	38.867	Saimiri_boliviensis_boliviensis
ENSORLG00020000991	-	100	55.659	ENSSFOG00015001018	atxn2l	99	55.236	Scleropages_formosus
ENSORLG00020000991	-	83	52.886	ENSSMAG00000016365	atxn2l	95	51.274	Scophthalmus_maximus
ENSORLG00020000991	-	100	81.226	ENSSMAG00000016932	-	100	80.943	Scophthalmus_maximus
ENSORLG00020000991	-	98	83.865	ENSSDUG00000023014	-	100	83.575	Seriola_dumerili
ENSORLG00020000991	-	52	52.531	ENSSDUG00000005833	atxn2l	99	53.688	Seriola_dumerili
ENSORLG00020000991	-	83	93.130	ENSSLDG00000017701	-	98	93.130	Seriola_lalandi_dorsalis
ENSORLG00020000991	-	100	83.129	ENSSPAG00000008174	-	100	83.443	Stegastes_partitus
ENSORLG00020000991	-	100	79.281	ENSTRUG00000007132	-	100	78.713	Takifugu_rubripes
ENSORLG00020000991	-	98	76.522	ENSTNIG00000018942	-	100	76.232	Tetraodon_nigroviridis
ENSORLG00020000991	-	94	41.675	ENSTTRG00000005913	ATXN2L	52	42.979	Tursiops_truncatus
ENSORLG00020000991	-	94	42.286	ENSUMAG00000009437	ATXN2L	90	58.140	Ursus_maritimus
ENSORLG00020000991	-	94	43.491	ENSVVUG00000024239	ATXN2L	60	36.234	Vulpes_vulpes
ENSORLG00020000991	-	100	38.394	ENSXETG00000014990	atxn2l	76	39.150	Xenopus_tropicalis
ENSORLG00020000991	-	79	79.284	ENSXCOG00000001128	-	98	78.517	Xiphophorus_couchianus
ENSORLG00020000991	-	98	79.191	ENSXMAG00000010133	-	100	78.613	Xiphophorus_maculatus