EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00020001332 (Gene tree)
Gene ID
-
Gene Symbol
YTHDF1 (1 of many)
Alias
-
Full Name
YTH N6-methyladenosine RNA binding protein 1
Gene Type
protein_coding
Species
Oryzias_latipes_hni
Status
putative
Strand
Plus strand
Length
9533 bases
Position
chr7:15652574-15662106
Accession
15867
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00020000623YTHPF04146.155.3e-4111
ENSORLP00020000630YTHPF04146.156e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00020014410YTHDF1 (1 of many)-2021650-ENSORLP00020000623549 (aa)--
ENSORLT00020014400YTHDF1 (1 of many)-2014332-ENSORLP00020000630605 (aa)--
Gene Model
Click here to download ENSORLG00020001332's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020001332's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00020001332YTHDF19959.302ENSORLG00020014684ythdf39960.131
ENSORLG00020001332YTHDF19975.767ENSORLG00020000307ythdf19975.241
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00020001332YTHDF19974.107ENSG00000149658YTHDF19774.592Homo_sapiens
ENSORLG00020001332YTHDF19976.320ENSAPOG00000004358ythdf19977.440Acanthochromis_polyacanthus
ENSORLG00020001332YTHDF110092.880ENSAPOG00000010796YTHDF110091.086Acanthochromis_polyacanthus
ENSORLG00020001332YTHDF19975.636ENSAMEG00000017323YTHDF19675.636Ailuropoda_melanoleuca
ENSORLG00020001332YTHDF19991.320ENSACIG00000020083YTHDF19791.139Amphilophus_citrinellus
ENSORLG00020001332YTHDF19678.062ENSACIG00000011264ythdf19477.818Amphilophus_citrinellus
ENSORLG00020001332YTHDF19977.530ENSAOCG00000022251ythdf19977.759Amphiprion_ocellaris
ENSORLG00020001332YTHDF110092.718ENSAOCG00000012567YTHDF110090.924Amphiprion_ocellaris
ENSORLG00020001332YTHDF19976.677ENSAPEG00000021878ythdf19976.960Amphiprion_percula
ENSORLG00020001332YTHDF110092.880ENSAPEG00000008750YTHDF110091.086Amphiprion_percula
ENSORLG00020001332YTHDF19976.214ENSATEG00000023840ythdf19976.480Anabas_testudineus
ENSORLG00020001332YTHDF110091.909ENSATEG00000005996YTHDF110091.909Anabas_testudineus
ENSORLG00020001332YTHDF19976.993ENSAPLG00000005985YTHDF19777.132Anas_platyrhynchos
ENSORLG00020001332YTHDF19976.812ENSACAG00000005560YTHDF19776.770Anolis_carolinensis
ENSORLG00020001332YTHDF19975.181ENSANAG00000034786-10074.710Aotus_nancymaae
ENSORLG00020001332YTHDF19962.364ENSANAG00000021022-10059.770Aotus_nancymaae
ENSORLG00020001332YTHDF110091.100ENSACLG00000025518YTHDF110090.939Astatotilapia_calliptera
ENSORLG00020001332YTHDF19975.136ENSBTAG00000010383YTHDF110073.501Bos_taurus
ENSORLG00020001332YTHDF19972.600ENSCJAG00000010056YTHDF19774.773Callithrix_jacchus
ENSORLG00020001332YTHDF19375.000ENSCAFG00000012772YTHDF19975.000Canis_familiaris
ENSORLG00020001332YTHDF19375.000ENSCAFG00020001214YTHDF19975.000Canis_lupus_dingo
ENSORLG00020001332YTHDF19974.592ENSCHIG00000026494YTHDF19873.321Capra_hircus
ENSORLG00020001332YTHDF19974.327ENSTSYG00000033436YTHDF19774.909Carlito_syrichta
ENSORLG00020001332YTHDF19973.273ENSCAPG00000002544YTHDF19373.273Cavia_aperea
ENSORLG00020001332YTHDF19973.818ENSCPOG00000010202YTHDF19773.818Cavia_porcellus
ENSORLG00020001332YTHDF19974.592ENSCCAG00000024650YTHDF19774.592Cebus_capucinus
ENSORLG00020001332YTHDF19975.588ENSCATG00000033272YTHDF19775.636Cercocebus_atys
ENSORLG00020001332YTHDF19974.684ENSCLAG00000005989YTHDF19874.322Chinchilla_lanigera
ENSORLG00020001332YTHDF19975.588ENSCSAG00000016266YTHDF19775.636Chlorocebus_sabaeus
ENSORLG00020001332YTHDF19976.344ENSCPBG00000027183YTHDF19776.685Chrysemys_picta_bellii
ENSORLG00020001332YTHDF19975.407ENSCANG00000029082YTHDF19775.455Colobus_angolensis_palliatus
ENSORLG00020001332YTHDF19975.499ENSCGRG00001016568Ythdf19775.455Cricetulus_griseus_chok1gshd
ENSORLG00020001332YTHDF19975.499ENSCGRG00000009207Ythdf19975.455Cricetulus_griseus_crigri
ENSORLG00020001332YTHDF19679.626ENSCSEG00000020623YTHDF19977.080Cynoglossus_semilaevis
ENSORLG00020001332YTHDF19878.165ENSCVAG00000017940ythdf19975.929Cyprinodon_variegatus
ENSORLG00020001332YTHDF110090.276ENSCVAG00000014378YTHDF110090.113Cyprinodon_variegatus
ENSORLG00020001332YTHDF110080.192ENSDARG00000016447ythdf110081.463Danio_rerio
ENSORLG00020001332YTHDF19974.600ENSDNOG00000043590YTHDF19775.862Dasypus_novemcinctus
ENSORLG00020001332YTHDF110072.744ENSDORG00000002879Ythdf19572.744Dipodomys_ordii
ENSORLG00020001332YTHDF19554.895ENSETEG00000017860-9556.159Echinops_telfairi
ENSORLG00020001332YTHDF19975.407ENSEASG00005023186YTHDF19775.774Equus_asinus_asinus
ENSORLG00020001332YTHDF19774.816ENSECAG00000019475YTHDF110075.435Equus_caballus
ENSORLG00020001332YTHDF19475.803ENSEEUG00000007461YTHDF110075.526Erinaceus_europaeus
ENSORLG00020001332YTHDF19979.723ENSELUG00000022768ythdf19979.147Esox_lucius
ENSORLG00020001332YTHDF19978.495ENSELUG00000001906YTHDF19982.714Esox_lucius
ENSORLG00020001332YTHDF19975.818ENSFCAG00000008917YTHDF19776.000Felis_catus
ENSORLG00020001332YTHDF19977.049ENSFALG00000010463YTHDF19777.049Ficedula_albicollis
ENSORLG00020001332YTHDF19973.551ENSFDAG00000019602YTHDF19773.684Fukomys_damarensis
ENSORLG00020001332YTHDF19978.909ENSFHEG00000023218ythdf19679.482Fundulus_heteroclitus
ENSORLG00020001332YTHDF110091.424ENSFHEG00000002540YTHDF110091.100Fundulus_heteroclitus
ENSORLG00020001332YTHDF18396.277ENSGMOG00000019610ythdf18291.429Gadus_morhua
ENSORLG00020001332YTHDF19976.268ENSGALG00000005745YTHDF110077.027Gallus_gallus
ENSORLG00020001332YTHDF110092.233ENSGAFG00000021100YTHDF110090.600Gambusia_affinis
ENSORLG00020001332YTHDF19985.565ENSGACG00000002613YTHDF19985.203Gasterosteus_aculeatus
ENSORLG00020001332YTHDF19976.499ENSGACG00000012014ythdf19976.052Gasterosteus_aculeatus
ENSORLG00020001332YTHDF19976.344ENSGAGG00000003007YTHDF19776.588Gopherus_agassizii
ENSORLG00020001332YTHDF19974.464ENSGGOG00000008340YTHDF19774.955Gorilla_gorilla
ENSORLG00020001332YTHDF19977.398ENSHBUG00000011284ythdf19976.159Haplochromis_burtoni
ENSORLG00020001332YTHDF110091.586ENSHBUG00000004875YTHDF110091.424Haplochromis_burtoni
ENSORLG00020001332YTHDF19973.656ENSHGLG00000006585YTHDF19774.047Heterocephalus_glaber_female
ENSORLG00020001332YTHDF19973.656ENSHGLG00100004683YTHDF19774.047Heterocephalus_glaber_male
ENSORLG00020001332YTHDF110087.825ENSHCOG00000011303YTHDF110086.542Hippocampus_comes
ENSORLG00020001332YTHDF19975.868ENSHCOG00000008866ythdf19975.167Hippocampus_comes
ENSORLG00020001332YTHDF19983.424ENSIPUG00000000425Ythdf19782.117Ictalurus_punctatus
ENSORLG00020001332YTHDF19974.727ENSSTOG00000023001YTHDF19875.273Ictidomys_tridecemlineatus
ENSORLG00020001332YTHDF19974.506ENSJJAG00000013589Ythdf19974.549Jaculus_jaculus
ENSORLG00020001332YTHDF110092.520ENSKMAG00000017472YTHDF110091.870Kryptolebias_marmoratus
ENSORLG00020001332YTHDF19680.224ENSKMAG00000005595ythdf19975.563Kryptolebias_marmoratus
ENSORLG00020001332YTHDF19679.702ENSLBEG00000014105ythdf19977.134Labrus_bergylta
ENSORLG00020001332YTHDF110090.291ENSLBEG00000012068YTHDF110089.123Labrus_bergylta
ENSORLG00020001332YTHDF19875.228ENSLACG00000014195YTHDF19873.124Latimeria_chalumnae
ENSORLG00020001332YTHDF110078.956ENSLOCG00000005020ythdf110077.997Lepisosteus_oculatus
ENSORLG00020001332YTHDF19975.090ENSLAFG00000008884YTHDF19774.549Loxodonta_africana
ENSORLG00020001332YTHDF19975.588ENSMFAG00000042868YTHDF19775.636Macaca_fascicularis
ENSORLG00020001332YTHDF19975.588ENSMMUG00000009227YTHDF19775.636Macaca_mulatta
ENSORLG00020001332YTHDF19975.588ENSMNEG00000030851YTHDF19775.636Macaca_nemestrina
ENSORLG00020001332YTHDF19975.588ENSMLEG00000009252YTHDF19975.636Mandrillus_leucophaeus
ENSORLG00020001332YTHDF110091.586ENSMAMG00000011072YTHDF110091.586Mastacembelus_armatus
ENSORLG00020001332YTHDF19975.606ENSMAMG00000024255ythdf19975.200Mastacembelus_armatus
ENSORLG00020001332YTHDF19977.597ENSMZEG00005026397ythdf19976.973Maylandia_zebra
ENSORLG00020001332YTHDF110091.586ENSMZEG00005023596YTHDF110091.424Maylandia_zebra
ENSORLG00020001332YTHDF19976.268ENSMGAG00000006139YTHDF19776.951Meleagris_gallopavo
ENSORLG00020001332YTHDF19975.318ENSMAUG00000017660Ythdf19775.273Mesocricetus_auratus
ENSORLG00020001332YTHDF19974.775ENSMICG00000032266YTHDF19774.638Microcebus_murinus
ENSORLG00020001332YTHDF19975.136ENSMOCG00000013573Ythdf19775.273Microtus_ochrogaster
ENSORLG00020001332YTHDF19675.838ENSMMOG00000017500ythdf19776.382Mola_mola
ENSORLG00020001332YTHDF19990.686ENSMMOG00000020467YTHDF19990.686Mola_mola
ENSORLG00020001332YTHDF19376.673ENSMODG00000016842YTHDF110076.108Monodelphis_domestica
ENSORLG00020001332YTHDF110090.894ENSMALG00000022209YTHDF110090.894Monopterus_albus
ENSORLG00020001332YTHDF19679.190ENSMALG00000015672ythdf19975.323Monopterus_albus
ENSORLG00020001332YTHDF19975.136MGP_CAROLIEiJ_G0024790Ythdf19775.091Mus_caroli
ENSORLG00020001332YTHDF19975.136ENSMUSG00000038848Ythdf19775.091Mus_musculus
ENSORLG00020001332YTHDF19975.136MGP_PahariEiJ_G0026237Ythdf19775.091Mus_pahari
ENSORLG00020001332YTHDF19975.136MGP_SPRETEiJ_G0025715Ythdf19775.091Mus_spretus
ENSORLG00020001332YTHDF19371.977ENSMPUG00000008111YTHDF110073.308Mustela_putorius_furo
ENSORLG00020001332YTHDF19975.135ENSMLUG00000002241YTHDF19674.234Myotis_lucifugus
ENSORLG00020001332YTHDF19975.499ENSNGAG00000000334Ythdf19775.273Nannospalax_galili
ENSORLG00020001332YTHDF19988.989ENSNBRG00000015321YTHDF19991.107Neolamprologus_brichardi
ENSORLG00020001332YTHDF19976.367ENSNBRG00000008213ythdf19583.475Neolamprologus_brichardi
ENSORLG00020001332YTHDF19768.275ENSOPRG00000001758-9867.742Ochotona_princeps
ENSORLG00020001332YTHDF18377.778ENSODEG00000000074-9761.802Octodon_degus
ENSORLG00020001332YTHDF19974.101ENSODEG00000004380-9774.410Octodon_degus
ENSORLG00020001332YTHDF19677.208ENSONIG00000016799ythdf19976.783Oreochromis_niloticus
ENSORLG00020001332YTHDF19976.812ENSOANG00000003723YTHDF19776.130Ornithorhynchus_anatinus
ENSORLG00020001332YTHDF110098.529ENSORLG00000009739YTHDF110098.529Oryzias_latipes
ENSORLG00020001332YTHDF19975.362ENSORLG00000014665YTHDF19975.120Oryzias_latipes
ENSORLG00020001332YTHDF19975.606ENSORLG00015006302ythdf19975.080Oryzias_latipes_hsok
ENSORLG00020001332YTHDF110098.366ENSORLG00015018321YTHDF110098.366Oryzias_latipes_hsok
ENSORLG00020001332YTHDF110096.732ENSOMEG00000011843YTHDF110096.732Oryzias_melastigma
ENSORLG00020001332YTHDF19976.786ENSOMEG00000002941YTHDF19976.414Oryzias_melastigma
ENSORLG00020001332YTHDF19974.188ENSOGAG00000000480YTHDF19773.866Otolemur_garnettii
ENSORLG00020001332YTHDF19974.464ENSPPAG00000023277YTHDF19874.955Pan_paniscus
ENSORLG00020001332YTHDF19976.182ENSPPRG00000020805YTHDF19776.182Panthera_pardus
ENSORLG00020001332YTHDF19970.620ENSPTIG00000017355YTHDF19778.210Panthera_tigris_altaica
ENSORLG00020001332YTHDF19974.464ENSPTRG00000013730YTHDF19774.955Pan_troglodytes
ENSORLG00020001332YTHDF19975.588ENSPANG00000021472YTHDF19775.636Papio_anubis
ENSORLG00020001332YTHDF19875.135ENSPKIG00000005026YTHDF19973.109Paramormyrops_kingsleyae
ENSORLG00020001332YTHDF19973.835ENSPKIG00000005427ythdf19875.180Paramormyrops_kingsleyae
ENSORLG00020001332YTHDF19876.471ENSPSIG00000005529YTHDF19873.838Pelodiscus_sinensis
ENSORLG00020001332YTHDF19676.814ENSPMGG00000015328ythdf19776.114Periophthalmus_magnuspinnatus
ENSORLG00020001332YTHDF110086.054ENSPMGG00000009101YTHDF19984.551Periophthalmus_magnuspinnatus
ENSORLG00020001332YTHDF19975.318ENSPEMG00000020199Ythdf19975.455Peromyscus_maniculatus_bairdii
ENSORLG00020001332YTHDF19876.838ENSPCIG00000017170YTHDF110076.301Phascolarctos_cinereus
ENSORLG00020001332YTHDF19976.298ENSPFOG00000005405ythdf19975.890Poecilia_formosa
ENSORLG00020001332YTHDF110092.395ENSPLAG00000006298YTHDF110090.600Poecilia_latipinna
ENSORLG00020001332YTHDF19879.174ENSPLAG00000006653ythdf19579.963Poecilia_latipinna
ENSORLG00020001332YTHDF110092.233ENSPMEG00000020969-10090.438Poecilia_mexicana
ENSORLG00020001332YTHDF19878.986ENSPMEG00000023753ythdf19976.206Poecilia_mexicana
ENSORLG00020001332YTHDF19880.581ENSPREG00000002173ythdf19976.667Poecilia_reticulata
ENSORLG00020001332YTHDF19791.681ENSPREG00000017662YTHDF19891.152Poecilia_reticulata
ENSORLG00020001332YTHDF18590.500ENSPPYG00000011226YTHDF19890.500Pongo_abelii
ENSORLG00020001332YTHDF19171.180ENSPCAG00000002452YTHDF19871.683Procavia_capensis
ENSORLG00020001332YTHDF19975.090ENSPCOG00000025969YTHDF19775.000Propithecus_coquereli
ENSORLG00020001332YTHDF19869.963ENSPVAG00000017568YTHDF19968.027Pteropus_vampyrus
ENSORLG00020001332YTHDF19977.398ENSPNYG00000014007ythdf19976.846Pundamilia_nyererei
ENSORLG00020001332YTHDF110091.586ENSPNYG00000002266YTHDF110091.424Pundamilia_nyererei
ENSORLG00020001332YTHDF110080.128ENSPNAG00000012447ythdf110081.169Pygocentrus_nattereri
ENSORLG00020001332YTHDF19975.136ENSRNOG00000027015Ythdf19775.091Rattus_norvegicus
ENSORLG00020001332YTHDF19974.684ENSRBIG00000044959YTHDF19774.727Rhinopithecus_bieti
ENSORLG00020001332YTHDF19974.684ENSRROG00000033014YTHDF19774.727Rhinopithecus_roxellana
ENSORLG00020001332YTHDF110072.760ENSSBOG00000027278YTHDF110073.166Saimiri_boliviensis_boliviensis
ENSORLG00020001332YTHDF19976.951ENSSHAG00000010430YTHDF18776.449Sarcophilus_harrisii
ENSORLG00020001332YTHDF110078.105ENSSFOG00015000284ythdf110077.778Scleropages_formosus
ENSORLG00020001332YTHDF19990.066ENSSMAG00000007635YTHDF110083.896Scophthalmus_maximus
ENSORLG00020001332YTHDF17391.720ENSSMAG00000013715ythdf19186.592Scophthalmus_maximus
ENSORLG00020001332YTHDF19679.889ENSSDUG00000000435ythdf19976.763Seriola_dumerili
ENSORLG00020001332YTHDF110088.486ENSSDUG00000015823YTHDF110088.486Seriola_dumerili
ENSORLG00020001332YTHDF19976.367ENSSLDG00000024948ythdf19977.310Seriola_lalandi_dorsalis
ENSORLG00020001332YTHDF110089.331ENSSLDG00000001054YTHDF110089.331Seriola_lalandi_dorsalis
ENSORLG00020001332YTHDF19377.264ENSSPUG00000015143YTHDF110077.264Sphenodon_punctatus
ENSORLG00020001332YTHDF19975.556ENSSPAG00000014989ythdf19977.207Stegastes_partitus
ENSORLG00020001332YTHDF110092.233ENSSPAG00000003666YTHDF110091.909Stegastes_partitus
ENSORLG00020001332YTHDF19973.091ENSSSCG00000040086YTHDF19773.381Sus_scrofa
ENSORLG00020001332YTHDF19976.630ENSTGUG00000007565YTHDF19877.314Taeniopygia_guttata
ENSORLG00020001332YTHDF19488.718ENSTRUG00000005049YTHDF110087.894Takifugu_rubripes
ENSORLG00020001332YTHDF19978.772ENSTRUG00000004288ythdf19977.258Takifugu_rubripes
ENSORLG00020001332YTHDF19978.102ENSTNIG00000012490ythdf19974.830Tetraodon_nigroviridis
ENSORLG00020001332YTHDF19983.303ENSTNIG00000003975YTHDF19780.817Tetraodon_nigroviridis
ENSORLG00020001332YTHDF19873.801ENSTTRG00000001804YTHDF19970.119Tursiops_truncatus
ENSORLG00020001332YTHDF110074.910ENSUAMG00000011021YTHDF110075.242Ursus_americanus
ENSORLG00020001332YTHDF19375.435ENSUMAG00000022290YTHDF110075.048Ursus_maritimus
ENSORLG00020001332YTHDF19375.000ENSVVUG00000015275YTHDF19975.000Vulpes_vulpes
ENSORLG00020001332YTHDF19876.577ENSXETG00000027086ythdf19873.854Xenopus_tropicalis
ENSORLG00020001332YTHDF19879.640ENSXCOG00000002490ythdf19279.777Xiphophorus_couchianus
ENSORLG00020001332YTHDF19891.060ENSXCOG00000008115YTHDF19989.386Xiphophorus_couchianus
ENSORLG00020001332YTHDF19979.713ENSXMAG00000008525ythdf19976.013Xiphophorus_maculatus
ENSORLG00020001332YTHDF110091.909ENSXMAG00000015644YTHDF110091.203Xiphophorus_maculatus

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