EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020001458 (Gene tree)
Gene ID: -
Gene Symbol: prpf6
Alias: -
Full Name: PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 16088 bases
Position: chr7:15255352-15271439
Accession: ZDB-GENE-030131-2575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020000757	PRP1_N	PF06424.12	1.2e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020014180	-	4477	-	ENSORLP00020000757	969 (aa)	-	-

Gene Model

Click here to download ENSORLG00020001458's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020001458's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020001458	prpf6	96	92.030	ENSG00000101161	PRPF6	100	92.030	Homo_sapiens
ENSORLG00020001458	prpf6	100	96.182	ENSAPOG00000010395	prpf6	100	96.182	Acanthochromis_polyacanthus
ENSORLG00020001458	prpf6	96	91.189	ENSAMEG00000001916	PRPF6	99	91.189	Ailuropoda_melanoleuca
ENSORLG00020001458	prpf6	100	96.182	ENSACIG00000019862	prpf6	100	96.182	Amphilophus_citrinellus
ENSORLG00020001458	prpf6	100	96.285	ENSAOCG00000012988	prpf6	100	96.285	Amphiprion_ocellaris
ENSORLG00020001458	prpf6	96	90.645	ENSAPEG00000008301	prpf6	100	90.860	Amphiprion_percula
ENSORLG00020001458	prpf6	100	95.562	ENSATEG00000005581	prpf6	100	95.562	Anabas_testudineus
ENSORLG00020001458	prpf6	96	92.455	ENSACAG00000006464	PRPF6	95	92.455	Anolis_carolinensis
ENSORLG00020001458	prpf6	96	92.242	ENSANAG00000012661	PRPF6	100	93.404	Aotus_nancymaae
ENSORLG00020001458	prpf6	100	96.801	ENSACLG00000025875	prpf6	100	96.801	Astatotilapia_calliptera
ENSORLG00020001458	prpf6	97	93.432	ENSAMXG00000001929	prpf6	100	91.906	Astyanax_mexicanus
ENSORLG00020001458	prpf6	96	92.136	ENSBTAG00000011656	PRPF6	100	92.136	Bos_taurus
ENSORLG00020001458	prpf6	96	92.242	ENSCJAG00000010616	PRPF6	100	92.242	Callithrix_jacchus
ENSORLG00020001458	prpf6	96	92.242	ENSCAFG00000013165	PRPF6	100	92.242	Canis_familiaris
ENSORLG00020001458	prpf6	96	92.242	ENSCAFG00020002050	PRPF6	100	92.242	Canis_lupus_dingo
ENSORLG00020001458	prpf6	96	92.136	ENSCHIG00000018187	PRPF6	100	92.136	Capra_hircus
ENSORLG00020001458	prpf6	96	92.242	ENSTSYG00000007814	PRPF6	100	92.242	Carlito_syrichta
ENSORLG00020001458	prpf6	93	91.494	ENSCAPG00000015077	PRPF6	100	91.058	Cavia_aperea
ENSORLG00020001458	prpf6	96	92.667	ENSCPOG00000007518	PRPF6	100	92.667	Cavia_porcellus
ENSORLG00020001458	prpf6	96	89.160	ENSCCAG00000024564	PRPF6	100	89.160	Cebus_capucinus
ENSORLG00020001458	prpf6	96	92.136	ENSCATG00000037473	PRPF6	100	92.136	Cercocebus_atys
ENSORLG00020001458	prpf6	96	88.842	ENSCLAG00000003854	PRPF6	100	88.842	Chinchilla_lanigera
ENSORLG00020001458	prpf6	96	87.540	ENSCSAG00000016742	PRPF6	100	87.540	Chlorocebus_sabaeus
ENSORLG00020001458	prpf6	81	77.886	ENSCHOG00000003315	-	98	77.686	Choloepus_hoffmanni
ENSORLG00020001458	prpf6	98	91.051	ENSCPBG00000013964	PRPF6	96	92.766	Chrysemys_picta_bellii
ENSORLG00020001458	prpf6	96	71.882	ENSCING00000008817	-	99	71.882	Ciona_intestinalis
ENSORLG00020001458	prpf6	96	91.923	ENSCANG00000038230	PRPF6	100	91.923	Colobus_angolensis_palliatus
ENSORLG00020001458	prpf6	96	92.667	ENSCGRG00001022666	Prpf6	100	92.667	Cricetulus_griseus_chok1gshd
ENSORLG00020001458	prpf6	96	91.183	ENSCSEG00000018561	prpf6	100	91.183	Cynoglossus_semilaevis
ENSORLG00020001458	prpf6	100	95.975	ENSCVAG00000010550	prpf6	100	95.975	Cyprinodon_variegatus
ENSORLG00020001458	prpf6	100	91.803	ENSDARG00000091367	prpf6	100	93.326	Danio_rerio
ENSORLG00020001458	prpf6	96	91.923	ENSDNOG00000040544	PRPF6	100	91.923	Dasypus_novemcinctus
ENSORLG00020001458	prpf6	87	92.056	ENSDORG00000005406	Prpf6	100	92.056	Dipodomys_ordii
ENSORLG00020001458	prpf6	96	71.720	FBgn0036828	CG6841	99	72.151	Drosophila_melanogaster
ENSORLG00020001458	prpf6	83	91.228	ENSETEG00000004447	PRPF6	85	91.228	Echinops_telfairi
ENSORLG00020001458	prpf6	96	86.561	ENSEBUG00000008835	prpf6	100	86.561	Eptatretus_burgeri
ENSORLG00020001458	prpf6	99	90.299	ENSEASG00005023115	PRPF6	100	92.349	Equus_asinus_asinus
ENSORLG00020001458	prpf6	96	88.098	ENSECAG00000013983	PRPF6	100	88.098	Equus_caballus
ENSORLG00020001458	prpf6	86	95.833	ENSEEUG00000000180	PRPF6	81	95.833	Erinaceus_europaeus
ENSORLG00020001458	prpf6	97	94.055	ENSELUG00000001945	prpf6	94	94.055	Esox_lucius
ENSORLG00020001458	prpf6	96	92.242	ENSFCAG00000001183	PRPF6	100	92.242	Felis_catus
ENSORLG00020001458	prpf6	98	84.298	ENSFALG00000006046	-	97	86.170	Ficedula_albicollis
ENSORLG00020001458	prpf6	96	92.487	ENSFALG00000010326	-	98	92.487	Ficedula_albicollis
ENSORLG00020001458	prpf6	96	91.286	ENSFDAG00000006451	PRPF6	100	92.290	Fukomys_damarensis
ENSORLG00020001458	prpf6	99	96.791	ENSFHEG00000000560	prpf6	99	96.791	Fundulus_heteroclitus
ENSORLG00020001458	prpf6	97	93.531	ENSGMOG00000015622	prpf6	99	93.531	Gadus_morhua
ENSORLG00020001458	prpf6	96	92.774	ENSGALG00000006001	PRPF6	100	92.774	Gallus_gallus
ENSORLG00020001458	prpf6	100	92.260	ENSGAFG00000021109	prpf6	100	92.260	Gambusia_affinis
ENSORLG00020001458	prpf6	97	95.127	ENSGACG00000002576	prpf6	100	95.127	Gasterosteus_aculeatus
ENSORLG00020001458	prpf6	98	91.060	ENSGAGG00000008653	PRPF6	96	92.660	Gopherus_agassizii
ENSORLG00020001458	prpf6	96	92.030	ENSGGOG00000016876	PRPF6	100	92.030	Gorilla_gorilla
ENSORLG00020001458	prpf6	100	96.801	ENSHBUG00000004496	prpf6	100	96.801	Haplochromis_burtoni
ENSORLG00020001458	prpf6	96	92.561	ENSHGLG00000009222	PRPF6	100	92.561	Heterocephalus_glaber_female
ENSORLG00020001458	prpf6	93	92.475	ENSHGLG00100016600	PRPF6	100	92.475	Heterocephalus_glaber_male
ENSORLG00020001458	prpf6	100	94.634	ENSHCOG00000011513	prpf6	100	94.634	Hippocampus_comes
ENSORLG00020001458	prpf6	100	91.684	ENSIPUG00000004912	prpf6	100	91.684	Ictalurus_punctatus
ENSORLG00020001458	prpf6	96	90.127	ENSSTOG00000002922	PRPF6	100	89.703	Ictidomys_tridecemlineatus
ENSORLG00020001458	prpf6	96	92.667	ENSJJAG00000000836	Prpf6	100	92.667	Jaculus_jaculus
ENSORLG00020001458	prpf6	100	96.594	ENSKMAG00000017800	prpf6	100	96.594	Kryptolebias_marmoratus
ENSORLG00020001458	prpf6	100	95.562	ENSLBEG00000012582	prpf6	100	95.562	Labrus_bergylta
ENSORLG00020001458	prpf6	98	92.083	ENSLOCG00000004827	prpf6	96	92.234	Lepisosteus_oculatus
ENSORLG00020001458	prpf6	96	91.923	ENSLAFG00000005272	PRPF6	100	91.923	Loxodonta_africana
ENSORLG00020001458	prpf6	96	91.923	ENSMFAG00000037542	PRPF6	100	91.923	Macaca_fascicularis
ENSORLG00020001458	prpf6	96	85.775	ENSMMUG00000015558	PRPF6	98	93.761	Macaca_mulatta
ENSORLG00020001458	prpf6	96	79.555	ENSMNEG00000045555	PRPF6	100	79.555	Macaca_nemestrina
ENSORLG00020001458	prpf6	100	95.562	ENSMAMG00000010718	prpf6	100	95.562	Mastacembelus_armatus
ENSORLG00020001458	prpf6	90	97.029	ENSMZEG00005026539	prpf6	100	97.029	Maylandia_zebra
ENSORLG00020001458	prpf6	97	97.015	ENSMZEG00005015261	-	100	97.015	Maylandia_zebra
ENSORLG00020001458	prpf6	93	92.912	ENSMGAG00000006634	PRPF6	100	92.912	Meleagris_gallopavo
ENSORLG00020001458	prpf6	96	92.667	ENSMAUG00000013969	Prpf6	100	92.667	Mesocricetus_auratus
ENSORLG00020001458	prpf6	84	91.484	ENSMICG00000017793	PRPF6	98	91.492	Microcebus_murinus
ENSORLG00020001458	prpf6	96	92.561	ENSMOCG00000001701	Prpf6	100	92.561	Microtus_ochrogaster
ENSORLG00020001458	prpf6	96	96.129	ENSMMOG00000020419	prpf6	100	96.129	Mola_mola
ENSORLG00020001458	prpf6	96	93.835	ENSMODG00000017051	PRPF6	99	93.835	Monodelphis_domestica
ENSORLG00020001458	prpf6	95	97.065	ENSMALG00000000089	prpf6	100	97.065	Monopterus_albus
ENSORLG00020001458	prpf6	96	86.397	MGP_CAROLIEiJ_G0024814	Prpf6	100	92.593	Mus_caroli
ENSORLG00020001458	prpf6	96	92.667	ENSMUSG00000002455	Prpf6	100	92.667	Mus_musculus
ENSORLG00020001458	prpf6	96	92.667	MGP_PahariEiJ_G0026262	Prpf6	100	92.667	Mus_pahari
ENSORLG00020001458	prpf6	96	92.667	MGP_SPRETEiJ_G0025741	Prpf6	100	92.667	Mus_spretus
ENSORLG00020001458	prpf6	86	92.588	ENSMPUG00000008673	PRPF6	99	92.133	Mustela_putorius_furo
ENSORLG00020001458	prpf6	96	92.774	ENSNGAG00000003365	Prpf6	100	92.774	Nannospalax_galili
ENSORLG00020001458	prpf6	100	96.904	ENSNBRG00000015025	prpf6	100	96.904	Neolamprologus_brichardi
ENSORLG00020001458	prpf6	96	91.923	ENSNLEG00000010208	PRPF6	100	91.923	Nomascus_leucogenys
ENSORLG00020001458	prpf6	96	83.936	ENSMEUG00000009824	-	90	84.190	Notamacropus_eugenii
ENSORLG00020001458	prpf6	96	86.823	ENSODEG00000004841	PRPF6	100	86.823	Octodon_degus
ENSORLG00020001458	prpf6	100	96.594	ENSONIG00000017406	prpf6	100	96.594	Oreochromis_niloticus
ENSORLG00020001458	prpf6	96	92.667	ENSOANG00000004920	PRPF6	100	92.667	Ornithorhynchus_anatinus
ENSORLG00020001458	prpf6	95	90.343	ENSOCUG00000014151	PRPF6	100	90.343	Oryctolagus_cuniculus
ENSORLG00020001458	prpf6	100	99.897	ENSORLG00000009592	prpf6	100	99.897	Oryzias_latipes
ENSORLG00020001458	prpf6	100	100.000	ENSORLG00015018762	prpf6	100	100.000	Oryzias_latipes_hsok
ENSORLG00020001458	prpf6	100	98.762	ENSOMEG00000012174	prpf6	100	98.762	Oryzias_melastigma
ENSORLG00020001458	prpf6	96	85.350	ENSOGAG00000007573	PRPF6	100	85.350	Otolemur_garnettii
ENSORLG00020001458	prpf6	96	91.711	ENSOARG00000008776	PRPF6	99	91.711	Ovis_aries
ENSORLG00020001458	prpf6	96	92.030	ENSPPAG00000008686	PRPF6	100	92.030	Pan_paniscus
ENSORLG00020001458	prpf6	96	92.242	ENSPPRG00000008497	PRPF6	100	92.242	Panthera_pardus
ENSORLG00020001458	prpf6	93	92.148	ENSPTIG00000011184	PRPF6	97	92.148	Panthera_tigris_altaica
ENSORLG00020001458	prpf6	96	92.030	ENSPTRG00000013765	PRPF6	100	92.030	Pan_troglodytes
ENSORLG00020001458	prpf6	96	91.711	ENSPANG00000024135	PRPF6	100	91.711	Papio_anubis
ENSORLG00020001458	prpf6	98	92.723	ENSPKIG00000005627	prpf6	99	94.362	Paramormyrops_kingsleyae
ENSORLG00020001458	prpf6	90	92.290	ENSPSIG00000007717	PRPF6	100	92.290	Pelodiscus_sinensis
ENSORLG00020001458	prpf6	100	93.299	ENSPMGG00000008925	prpf6	100	92.577	Periophthalmus_magnuspinnatus
ENSORLG00020001458	prpf6	96	92.667	ENSPEMG00000016036	Prpf6	100	92.667	Peromyscus_maniculatus_bairdii
ENSORLG00020001458	prpf6	98	86.966	ENSPMAG00000006144	prpf6	99	88.380	Petromyzon_marinus
ENSORLG00020001458	prpf6	96	92.986	ENSPCIG00000017909	PRPF6	100	92.986	Phascolarctos_cinereus
ENSORLG00020001458	prpf6	100	95.808	ENSPFOG00000006431	prpf6	99	95.808	Poecilia_formosa
ENSORLG00020001458	prpf6	100	96.594	ENSPLAG00000005974	prpf6	100	96.594	Poecilia_latipinna
ENSORLG00020001458	prpf6	100	96.801	ENSPMEG00000009977	prpf6	100	96.801	Poecilia_mexicana
ENSORLG00020001458	prpf6	100	97.007	ENSPREG00000017993	prpf6	95	97.007	Poecilia_reticulata
ENSORLG00020001458	prpf6	96	91.498	ENSPPYG00000011256	PRPF6	100	91.498	Pongo_abelii
ENSORLG00020001458	prpf6	91	94.608	ENSPCAG00000006536	PRPF6	88	94.608	Procavia_capensis
ENSORLG00020001458	prpf6	96	91.817	ENSPCOG00000016881	PRPF6	100	91.817	Propithecus_coquereli
ENSORLG00020001458	prpf6	96	86.185	ENSPVAG00000014316	PRPF6	100	86.185	Pteropus_vampyrus
ENSORLG00020001458	prpf6	100	82.854	ENSPNYG00000001939	prpf6	100	82.854	Pundamilia_nyererei
ENSORLG00020001458	prpf6	97	94.386	ENSPNAG00000015606	prpf6	100	92.520	Pygocentrus_nattereri
ENSORLG00020001458	prpf6	96	92.561	ENSRNOG00000051498	Prpf6	100	92.561	Rattus_norvegicus
ENSORLG00020001458	prpf6	96	91.923	ENSRBIG00000043613	PRPF6	100	91.923	Rhinopithecus_bieti
ENSORLG00020001458	prpf6	96	88.889	ENSRROG00000040969	PRPF6	98	92.388	Rhinopithecus_roxellana
ENSORLG00020001458	prpf6	87	89.204	ENSSBOG00000020632	PRPF6	93	87.716	Saimiri_boliviensis_boliviensis
ENSORLG00020001458	prpf6	96	92.986	ENSSHAG00000016810	PRPF6	100	92.986	Sarcophilus_harrisii
ENSORLG00020001458	prpf6	95	94.086	ENSSFOG00015020859	prpf6	100	94.086	Scleropages_formosus
ENSORLG00020001458	prpf6	100	94.737	ENSSMAG00000008112	prpf6	100	94.737	Scophthalmus_maximus
ENSORLG00020001458	prpf6	100	95.666	ENSSDUG00000016142	prpf6	100	95.666	Seriola_dumerili
ENSORLG00020001458	prpf6	100	95.666	ENSSLDG00000025283	prpf6	99	95.666	Seriola_lalandi_dorsalis
ENSORLG00020001458	prpf6	90	91.600	ENSSPUG00000018260	PRPF6	100	91.600	Sphenodon_punctatus
ENSORLG00020001458	prpf6	100	96.182	ENSSPAG00000015850	prpf6	100	96.182	Stegastes_partitus
ENSORLG00020001458	prpf6	96	91.817	ENSSSCG00000029119	PRPF6	100	91.383	Sus_scrofa
ENSORLG00020001458	prpf6	96	92.585	ENSTGUG00000007221	PRPF6	100	92.585	Taeniopygia_guttata
ENSORLG00020001458	prpf6	100	94.324	ENSTRUG00000002920	prpf6	100	94.324	Takifugu_rubripes
ENSORLG00020001458	prpf6	96	89.160	ENSTNIG00000017873	prpf6	100	89.160	Tetraodon_nigroviridis
ENSORLG00020001458	prpf6	85	92.778	ENSTBEG00000005348	PRPF6	85	92.778	Tupaia_belangeri
ENSORLG00020001458	prpf6	96	91.923	ENSTTRG00000013068	PRPF6	100	91.923	Tursiops_truncatus
ENSORLG00020001458	prpf6	94	90.652	ENSUMAG00000021631	PRPF6	98	90.652	Ursus_maritimus
ENSORLG00020001458	prpf6	96	92.242	ENSVVUG00000014948	PRPF6	100	92.242	Vulpes_vulpes
ENSORLG00020001458	prpf6	98	90.635	ENSXETG00000012054	prpf6	97	92.021	Xenopus_tropicalis
ENSORLG00020001458	prpf6	100	96.491	ENSXCOG00000008082	prpf6	100	96.491	Xiphophorus_couchianus
ENSORLG00020001458	prpf6	100	96.388	ENSXMAG00000015581	prpf6	100	96.388	Xiphophorus_maculatus