EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020001602 (Gene tree)
Gene ID: -
Gene Symbol: gfi1ab
Alias: -
Full Name: growth factor independent 1A transcription repressor b
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 2216 bases
Position: chr4:23915554-23917769
Accession: ZDB-GENE-040116-8
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020021681	zf-C2H2	PF00096.26	1.2e-28	1	5
ENSORLP00020021681	zf-C2H2	PF00096.26	1.2e-28	2	5
ENSORLP00020021681	zf-C2H2	PF00096.26	1.2e-28	3	5
ENSORLP00020021681	zf-C2H2	PF00096.26	1.2e-28	4	5
ENSORLP00020021681	zf-C2H2	PF00096.26	1.2e-28	5	5
ENSORLP00020021681	zf-met	PF12874.7	2.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020013950	-	1146	-	ENSORLP00020021681	381 (aa)	-	-

Gene Model

Click here to download ENSORLG00020001602's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020001602's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020001602	gfi1ab	53	47.222	ENSORLG00020009965	-	75	47.222
ENSORLG00020001602	gfi1ab	51	45.033	ENSORLG00020009180	-	88	45.033
ENSORLG00020001602	gfi1ab	55	44.048	ENSORLG00020009184	-	89	50.000
ENSORLG00020001602	gfi1ab	58	40.476	ENSORLG00020008891	-	91	40.476
ENSORLG00020001602	gfi1ab	52	42.727	ENSORLG00020010285	znf646	72	42.727
ENSORLG00020001602	gfi1ab	57	40.373	ENSORLG00020000246	-	86	40.373
ENSORLG00020001602	gfi1ab	100	50.258	ENSORLG00020003719	GFI1B	100	50.258
ENSORLG00020001602	gfi1ab	57	36.879	ENSORLG00020000009	znf710b	51	36.879
ENSORLG00020001602	gfi1ab	51	43.220	ENSORLG00020009419	-	84	48.611
ENSORLG00020001602	gfi1ab	100	56.777	ENSORLG00020002817	GFI1	100	56.777
ENSORLG00020001602	gfi1ab	59	39.264	ENSORLG00020008424	-	88	39.264
ENSORLG00020001602	gfi1ab	80	44.512	ENSORLG00020018069	-	89	46.626
ENSORLG00020001602	gfi1ab	55	39.888	ENSORLG00020010560	-	98	40.816
ENSORLG00020001602	gfi1ab	59	44.578	ENSORLG00020017514	-	91	44.578
ENSORLG00020001602	gfi1ab	64	43.452	ENSORLG00020007018	-	87	43.452

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020001602	gfi1ab	100	60.890	ENSG00000162676	GFI1	100	60.829	Homo_sapiens
ENSORLG00020001602	gfi1ab	100	79.135	ENSAPOG00000015189	gfi1ab	100	79.135	Acanthochromis_polyacanthus
ENSORLG00020001602	gfi1ab	100	78.295	ENSACIG00000016354	gfi1ab	100	78.295	Amphilophus_citrinellus
ENSORLG00020001602	gfi1ab	100	53.461	ENSAOCG00000008339	gfi1ab	100	56.328	Amphiprion_ocellaris
ENSORLG00020001602	gfi1ab	100	78.880	ENSAPEG00000023870	gfi1ab	100	78.880	Amphiprion_percula
ENSORLG00020001602	gfi1ab	100	74.545	ENSATEG00000009167	gfi1ab	89	74.545	Anabas_testudineus
ENSORLG00020001602	gfi1ab	86	64.265	ENSAPLG00000015700	GFI1	99	64.265	Anas_platyrhynchos
ENSORLG00020001602	gfi1ab	100	63.902	ENSACAG00000004498	GFI1	100	64.634	Anolis_carolinensis
ENSORLG00020001602	gfi1ab	100	60.514	ENSANAG00000019656	GFI1	100	61.215	Aotus_nancymaae
ENSORLG00020001602	gfi1ab	100	79.587	ENSACLG00000026458	gfi1ab	93	79.587	Astatotilapia_calliptera
ENSORLG00020001602	gfi1ab	82	65.789	ENSAMXG00000006669	GFI1	99	65.789	Astyanax_mexicanus
ENSORLG00020001602	gfi1ab	100	61.823	ENSAMXG00000039600	gfi1ab	100	61.823	Astyanax_mexicanus
ENSORLG00020001602	gfi1ab	100	60.941	ENSBTAG00000016723	GFI1	100	61.412	Bos_taurus
ENSORLG00020001602	gfi1ab	100	60.369	ENSCJAG00000017609	GFI1	100	61.060	Callithrix_jacchus
ENSORLG00020001602	gfi1ab	100	61.124	ENSCAFG00000020155	GFI1	100	60.941	Canis_familiaris
ENSORLG00020001602	gfi1ab	100	61.124	ENSCAFG00020013371	GFI1	88	60.941	Canis_lupus_dingo
ENSORLG00020001602	gfi1ab	100	60.471	ENSCHIG00000016135	GFI1	100	60.280	Capra_hircus
ENSORLG00020001602	gfi1ab	100	62.648	ENSCPOG00000011727	GFI1	100	63.121	Cavia_porcellus
ENSORLG00020001602	gfi1ab	100	60.656	ENSCCAG00000036072	GFI1	100	60.599	Cebus_capucinus
ENSORLG00020001602	gfi1ab	100	61.358	ENSCATG00000037873	GFI1	100	61.290	Cercocebus_atys
ENSORLG00020001602	gfi1ab	85	91.892	ENSCLAG00000005915	GFI1	100	59.633	Chinchilla_lanigera
ENSORLG00020001602	gfi1ab	99	55.827	ENSCSAG00000001469	GFI1	100	55.851	Chlorocebus_sabaeus
ENSORLG00020001602	gfi1ab	100	61.593	ENSCANG00000034077	GFI1	100	61.521	Colobus_angolensis_palliatus
ENSORLG00020001602	gfi1ab	100	59.390	ENSCGRG00001015432	Gfi1	100	59.670	Cricetulus_griseus_chok1gshd
ENSORLG00020001602	gfi1ab	100	60.599	ENSCSEG00000017729	GFI1	100	60.848	Cynoglossus_semilaevis
ENSORLG00020001602	gfi1ab	100	58.780	ENSCVAG00000004930	GFI1	100	60.488	Cyprinodon_variegatus
ENSORLG00020001602	gfi1ab	100	78.093	ENSCVAG00000011828	gfi1ab	100	78.093	Cyprinodon_variegatus
ENSORLG00020001602	gfi1ab	100	67.920	ENSDARG00000044457	gfi1ab	100	68.170	Danio_rerio
ENSORLG00020001602	gfi1ab	100	60.798	ENSDNOG00000000782	GFI1	97	61.737	Dasypus_novemcinctus
ENSORLG00020001602	gfi1ab	100	62.411	ENSEASG00005015509	GFI1	86	62.884	Equus_asinus_asinus
ENSORLG00020001602	gfi1ab	99	53.015	ENSECAG00000006647	GFI1	94	53.518	Equus_caballus
ENSORLG00020001602	gfi1ab	100	61.005	ENSEEUG00000000198	GFI1	100	61.429	Erinaceus_europaeus
ENSORLG00020001602	gfi1ab	100	68.750	ENSELUG00000003015	gfi1ab	99	68.750	Esox_lucius
ENSORLG00020001602	gfi1ab	100	60.500	ENSELUG00000019033	GFI1	100	61.097	Esox_lucius
ENSORLG00020001602	gfi1ab	100	61.358	ENSFCAG00000005914	GFI1	100	61.827	Felis_catus
ENSORLG00020001602	gfi1ab	71	78.899	ENSFHEG00000002747	-	70	61.585	Fundulus_heteroclitus
ENSORLG00020001602	gfi1ab	100	78.093	ENSFHEG00000010997	gfi1ab	100	78.093	Fundulus_heteroclitus
ENSORLG00020001602	gfi1ab	100	59.653	ENSFHEG00000000341	GFI1	100	62.376	Fundulus_heteroclitus
ENSORLG00020001602	gfi1ab	100	71.684	ENSGMOG00000007737	gfi1ab	100	71.684	Gadus_morhua
ENSORLG00020001602	gfi1ab	100	63.145	ENSGALG00000043650	GFI1	100	64.216	Gallus_gallus
ENSORLG00020001602	gfi1ab	100	79.028	ENSGAFG00000016637	gfi1ab	100	79.028	Gambusia_affinis
ENSORLG00020001602	gfi1ab	100	59.314	ENSGAFG00000018063	GFI1	100	60.934	Gambusia_affinis
ENSORLG00020001602	gfi1ab	100	77.979	ENSGACG00000004257	gfi1ab	97	78.238	Gasterosteus_aculeatus
ENSORLG00020001602	gfi1ab	100	60.890	ENSGGOG00000005320	GFI1	100	60.829	Gorilla_gorilla
ENSORLG00020001602	gfi1ab	100	77.519	ENSHBUG00000011969	gfi1ab	100	77.519	Haplochromis_burtoni
ENSORLG00020001602	gfi1ab	100	62.648	ENSHGLG00000008020	GFI1	100	63.121	Heterocephalus_glaber_female
ENSORLG00020001602	gfi1ab	100	62.648	ENSHGLG00100000610	GFI1	100	63.121	Heterocephalus_glaber_male
ENSORLG00020001602	gfi1ab	100	60.922	ENSHCOG00000008590	gfi1ab	100	60.922	Hippocampus_comes
ENSORLG00020001602	gfi1ab	100	60.363	ENSHCOG00000019555	GFI1	100	60.363	Hippocampus_comes
ENSORLG00020001602	gfi1ab	100	59.653	ENSIPUG00000013414	GFI1	100	59.653	Ictalurus_punctatus
ENSORLG00020001602	gfi1ab	100	64.706	ENSIPUG00000010071	gfi1ab	87	65.561	Ictalurus_punctatus
ENSORLG00020001602	gfi1ab	100	60.563	ENSSTOG00000014583	GFI1	100	59.719	Ictidomys_tridecemlineatus
ENSORLG00020001602	gfi1ab	100	77.720	ENSKMAG00000003810	gfi1ab	100	77.720	Kryptolebias_marmoratus
ENSORLG00020001602	gfi1ab	100	79.082	ENSLBEG00000027776	gfi1ab	100	79.082	Labrus_bergylta
ENSORLG00020001602	gfi1ab	99	45.431	ENSLACG00000017590	-	99	45.431	Latimeria_chalumnae
ENSORLG00020001602	gfi1ab	100	66.501	ENSLACG00000013362	GFI1	98	66.501	Latimeria_chalumnae
ENSORLG00020001602	gfi1ab	100	69.500	ENSLOCG00000004711	gfi1ab	100	69.750	Lepisosteus_oculatus
ENSORLG00020001602	gfi1ab	100	60.766	ENSLAFG00000018346	GFI1	100	60.382	Loxodonta_africana
ENSORLG00020001602	gfi1ab	100	61.358	ENSMFAG00000045801	GFI1	100	61.290	Macaca_fascicularis
ENSORLG00020001602	gfi1ab	100	61.358	ENSMNEG00000036338	GFI1	100	61.290	Macaca_nemestrina
ENSORLG00020001602	gfi1ab	100	61.358	ENSMLEG00000036181	GFI1	100	61.290	Mandrillus_leucophaeus
ENSORLG00020001602	gfi1ab	100	79.275	ENSMAMG00000008125	gfi1ab	100	79.275	Mastacembelus_armatus
ENSORLG00020001602	gfi1ab	100	79.845	ENSMZEG00005009895	gfi1ab	100	79.845	Maylandia_zebra
ENSORLG00020001602	gfi1ab	86	65.318	ENSMGAG00000008187	GFI1	99	65.318	Meleagris_gallopavo
ENSORLG00020001602	gfi1ab	100	60.329	ENSMICG00000047208	GFI1	100	59.485	Microcebus_murinus
ENSORLG00020001602	gfi1ab	100	71.611	ENSMMOG00000005556	gfi1ab	100	71.611	Mola_mola
ENSORLG00020001602	gfi1ab	100	59.485	ENSMODG00000011802	GFI1	100	61.358	Monodelphis_domestica
ENSORLG00020001602	gfi1ab	100	76.166	ENSMALG00000014672	gfi1ab	100	76.166	Monopterus_albus
ENSORLG00020001602	gfi1ab	100	60.422	MGP_CAROLIEiJ_G0027508	Gfi1	100	97.037	Mus_caroli
ENSORLG00020001602	gfi1ab	100	60.890	ENSMUSG00000029275	Gfi1	100	60.890	Mus_musculus
ENSORLG00020001602	gfi1ab	100	60.422	MGP_PahariEiJ_G0017280	Gfi1	100	97.037	Mus_pahari
ENSORLG00020001602	gfi1ab	100	60.656	MGP_SPRETEiJ_G0028507	Gfi1	100	60.656	Mus_spretus
ENSORLG00020001602	gfi1ab	100	63.636	ENSMPUG00000004178	GFI1	97	63.384	Mustela_putorius_furo
ENSORLG00020001602	gfi1ab	100	60.613	ENSMLUG00000015191	GFI1	97	60.849	Myotis_lucifugus
ENSORLG00020001602	gfi1ab	100	76.531	ENSNBRG00000015774	gfi1ab	100	76.531	Neolamprologus_brichardi
ENSORLG00020001602	gfi1ab	91	60.513	ENSNLEG00000010470	GFI1	96	59.950	Nomascus_leucogenys
ENSORLG00020001602	gfi1ab	100	61.647	ENSOPRG00000001473	GFI1	100	62.118	Ochotona_princeps
ENSORLG00020001602	gfi1ab	100	79.587	ENSONIG00000019246	gfi1ab	100	79.587	Oreochromis_niloticus
ENSORLG00020001602	gfi1ab	71	96.154	ENSOANG00000022289	-	83	96.154	Ornithorhynchus_anatinus
ENSORLG00020001602	gfi1ab	98	54.595	ENSOCUG00000023553	GFI1	93	54.595	Oryctolagus_cuniculus
ENSORLG00020001602	gfi1ab	100	62.025	ENSORLG00000005060	GFI1	100	62.025	Oryzias_latipes
ENSORLG00020001602	gfi1ab	100	98.425	ENSORLG00000013806	gfi1ab	100	98.425	Oryzias_latipes
ENSORLG00020001602	gfi1ab	100	60.000	ENSORLG00015006070	GFI1	100	61.013	Oryzias_latipes_hsok
ENSORLG00020001602	gfi1ab	100	61.500	ENSOMEG00000016722	GFI1	100	62.025	Oryzias_melastigma
ENSORLG00020001602	gfi1ab	100	64.491	ENSOGAG00000027913	GFI1	100	64.230	Otolemur_garnettii
ENSORLG00020001602	gfi1ab	75	95.238	ENSOARG00000016329	GFI1	94	53.681	Ovis_aries
ENSORLG00020001602	gfi1ab	100	64.935	ENSPPAG00000042186	GFI1	100	65.455	Pan_paniscus
ENSORLG00020001602	gfi1ab	100	61.358	ENSPPRG00000007521	GFI1	100	61.827	Panthera_pardus
ENSORLG00020001602	gfi1ab	100	60.890	ENSPTRG00000043053	GFI1	100	60.829	Pan_troglodytes
ENSORLG00020001602	gfi1ab	100	61.358	ENSPANG00000016433	GFI1	100	61.290	Papio_anubis
ENSORLG00020001602	gfi1ab	100	69.500	ENSPKIG00000004263	GFI1	100	69.500	Paramormyrops_kingsleyae
ENSORLG00020001602	gfi1ab	85	65.889	ENSPSIG00000008734	GFI1	96	66.570	Pelodiscus_sinensis
ENSORLG00020001602	gfi1ab	56	91.667	ENSPMGG00000011041	GFI1	67	91.667	Periophthalmus_magnuspinnatus
ENSORLG00020001602	gfi1ab	100	74.419	ENSPMGG00000012546	gfi1ab	100	74.935	Periophthalmus_magnuspinnatus
ENSORLG00020001602	gfi1ab	100	61.905	ENSPCIG00000013728	GFI1	100	61.021	Phascolarctos_cinereus
ENSORLG00020001602	gfi1ab	100	78.005	ENSPFOG00000023214	gfi1ab	100	78.005	Poecilia_formosa
ENSORLG00020001602	gfi1ab	100	78.005	ENSPLAG00000010879	gfi1ab	100	78.005	Poecilia_latipinna
ENSORLG00020001602	gfi1ab	100	57.805	ENSPLAG00000005376	GFI1	91	60.784	Poecilia_latipinna
ENSORLG00020001602	gfi1ab	100	58.867	ENSPMEG00000019299	GFI1	100	61.634	Poecilia_mexicana
ENSORLG00020001602	gfi1ab	100	78.517	ENSPMEG00000013694	gfi1ab	100	78.517	Poecilia_mexicana
ENSORLG00020001602	gfi1ab	100	55.729	ENSPREG00000007997	GFI1	100	54.615	Poecilia_reticulata
ENSORLG00020001602	gfi1ab	100	79.434	ENSPREG00000014097	gfi1ab	100	79.434	Poecilia_reticulata
ENSORLG00020001602	gfi1ab	100	50.000	ENSPCAG00000011020	GFI1	100	50.000	Procavia_capensis
ENSORLG00020001602	gfi1ab	100	61.124	ENSPCOG00000020540	GFI1	100	60.369	Propithecus_coquereli
ENSORLG00020001602	gfi1ab	100	60.664	ENSPVAG00000006928	GFI1	100	61.429	Pteropus_vampyrus
ENSORLG00020001602	gfi1ab	100	79.587	ENSPNYG00000021183	gfi1ab	100	79.587	Pundamilia_nyererei
ENSORLG00020001602	gfi1ab	100	62.657	ENSPNAG00000027258	gfi1ab	100	62.657	Pygocentrus_nattereri
ENSORLG00020001602	gfi1ab	100	58.015	ENSPNAG00000028014	GFI1	100	58.015	Pygocentrus_nattereri
ENSORLG00020001602	gfi1ab	100	60.187	ENSRNOG00000002042	Gfi1	100	60.187	Rattus_norvegicus
ENSORLG00020001602	gfi1ab	100	61.358	ENSRBIG00000036467	GFI1	100	61.290	Rhinopithecus_bieti
ENSORLG00020001602	gfi1ab	100	61.358	ENSRROG00000031687	GFI1	100	61.290	Rhinopithecus_roxellana
ENSORLG00020001602	gfi1ab	100	60.890	ENSSBOG00000031300	GFI1	100	61.060	Saimiri_boliviensis_boliviensis
ENSORLG00020001602	gfi1ab	100	69.727	ENSSFOG00015020295	gfi1	100	69.727	Scleropages_formosus
ENSORLG00020001602	gfi1ab	99	41.667	ENSSFOG00015008114	-	98	42.820	Scleropages_formosus
ENSORLG00020001602	gfi1ab	100	75.959	ENSSMAG00000002782	gfi1ab	100	75.959	Scophthalmus_maximus
ENSORLG00020001602	gfi1ab	100	77.202	ENSSDUG00000022410	gfi1ab	100	77.461	Seriola_dumerili
ENSORLG00020001602	gfi1ab	100	77.202	ENSSLDG00000020163	gfi1ab	100	77.461	Seriola_lalandi_dorsalis
ENSORLG00020001602	gfi1ab	80	88.235	ENSSPAG00000009140	gfi1ab	100	88.235	Stegastes_partitus
ENSORLG00020001602	gfi1ab	100	61.283	ENSSSCG00000006902	GFI1	100	61.995	Sus_scrofa
ENSORLG00020001602	gfi1ab	86	65.706	ENSTGUG00000006060	GFI1	100	66.954	Taeniopygia_guttata
ENSORLG00020001602	gfi1ab	100	74.227	ENSTRUG00000000415	gfi1ab	100	74.227	Takifugu_rubripes
ENSORLG00020001602	gfi1ab	100	68.939	ENSTNIG00000000651	gfi1ab	97	68.939	Tetraodon_nigroviridis
ENSORLG00020001602	gfi1ab	100	61.229	ENSTTRG00000000082	GFI1	100	61.283	Tursiops_truncatus
ENSORLG00020001602	gfi1ab	100	62.439	ENSUAMG00000021124	GFI1	91	62.439	Ursus_americanus
ENSORLG00020001602	gfi1ab	100	63.520	ENSXETG00000023006	gfi1	98	63.520	Xenopus_tropicalis
ENSORLG00020001602	gfi1ab	100	78.149	ENSXMAG00000010523	gfi1ab	100	78.149	Xiphophorus_maculatus
ENSORLG00020001602	gfi1ab	85	52.691	ENSXMAG00000009274	GFI1	70	54.416	Xiphophorus_maculatus