EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020001716 (Gene tree)
Gene ID: -
Gene Symbol: plecb
Alias: -
Full Name: plectin b
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 59253 bases
Position: chr16:2878323-2937575
Accession: ZDB-GENE-100917-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020021763	S10_plectin	PF03501.15	1.3e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020013772	-	13284	-	ENSORLP00020000985	4427 (aa)	-	-
ENSORLT00020013783	-	16614	-	ENSORLP00020021763	5537 (aa)	-	-
ENSORLT00020013808	-	13548	-	ENSORLP00020021743	4515 (aa)	-	-

Gene Model

Click here to download ENSORLG00020001716's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020001716's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020001716	plecb	96	80.559	ENSATEG00000024559	plecb	95	80.584	Anabas_testudineus
ENSORLG00020001716	plecb	100	78.672	ENSACLG00000022613	plecb	100	78.744	Astatotilapia_calliptera
ENSORLG00020001716	plecb	99	83.070	ENSCVAG00000013972	plecb	96	83.040	Cyprinodon_variegatus
ENSORLG00020001716	plecb	85	77.380	ENSELUG00000020803	plecb	84	77.268	Esox_lucius
ENSORLG00020001716	plecb	84	78.703	ENSGMOG00000006545	plecb	99	78.900	Gadus_morhua
ENSORLG00020001716	plecb	84	83.996	ENSGACG00000005431	plecb	99	84.162	Gasterosteus_aculeatus
ENSORLG00020001716	plecb	92	71.487	ENSIPUG00000020055	plecb	87	73.363	Ictalurus_punctatus
ENSORLG00020001716	plecb	83	86.327	ENSKMAG00000003609	plecb	99	86.330	Kryptolebias_marmoratus
ENSORLG00020001716	plecb	99	76.376	ENSLBEG00000004779	plecb	96	77.943	Labrus_bergylta
ENSORLG00020001716	plecb	98	80.218	ENSMAMG00000001487	plecb	96	80.128	Mastacembelus_armatus
ENSORLG00020001716	plecb	83	71.050	ENSONIG00000013803	pleca	99	71.033	Oreochromis_niloticus
ENSORLG00020001716	plecb	100	99.043	ENSORLG00000023311	plecb	100	99.043	Oryzias_latipes
ENSORLG00020001716	plecb	100	98.917	ENSORLG00015017959	plecb	100	98.917	Oryzias_latipes_hsok
ENSORLG00020001716	plecb	100	91.098	ENSOMEG00000011949	plecb	100	91.170	Oryzias_melastigma
ENSORLG00020001716	plecb	84	71.552	ENSPKIG00000014989	pleca	89	71.619	Paramormyrops_kingsleyae
ENSORLG00020001716	plecb	99	77.700	ENSPMEG00000014762	plecb	100	77.732	Poecilia_mexicana
ENSORLG00020001716	plecb	99	77.416	ENSPREG00000014625	plecb	100	77.331	Poecilia_reticulata
ENSORLG00020001716	plecb	90	74.661	ENSPNAG00000001581	plecb	85	74.522	Pygocentrus_nattereri
ENSORLG00020001716	plecb	99	75.031	ENSTRUG00000003715	plecb	99	75.116	Takifugu_rubripes