EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020001742 (Gene tree)
Gene ID: -
Gene Symbol: crnkl1
Alias: -
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 7790 bases
Position: chr24:14902745-14910534
Accession: ZDB-GENE-040426-694
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020021777	HAT	PF02184.16	3.5e-35	1	2
ENSORLP00020021777	HAT	PF02184.16	3.5e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020013711	-	3154	-	ENSORLP00020021777	746 (aa)	-	-

Gene Model

Click here to download ENSORLG00020001742's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020001742's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020001742	crnkl1	89	85.285	ENSG00000101343	CRNKL1	97	85.285	Homo_sapiens
ENSORLG00020001742	crnkl1	100	88.289	ENSAPOG00000009705	crnkl1	97	92.741	Acanthochromis_polyacanthus
ENSORLG00020001742	crnkl1	89	86.082	ENSAMEG00000000270	CRNKL1	80	86.186	Ailuropoda_melanoleuca
ENSORLG00020001742	crnkl1	95	88.235	ENSACIG00000015267	crnkl1	95	88.235	Amphilophus_citrinellus
ENSORLG00020001742	crnkl1	100	88.742	ENSAOCG00000021964	crnkl1	100	88.874	Amphiprion_ocellaris
ENSORLG00020001742	crnkl1	100	88.845	ENSAPEG00000015041	crnkl1	100	88.845	Amphiprion_percula
ENSORLG00020001742	crnkl1	95	87.849	ENSATEG00000001068	crnkl1	94	88.095	Anabas_testudineus
ENSORLG00020001742	crnkl1	89	83.508	ENSAPLG00000013105	CRNKL1	97	83.508	Anas_platyrhynchos
ENSORLG00020001742	crnkl1	90	85.630	ENSACAG00000005284	CRNKL1	99	84.649	Anolis_carolinensis
ENSORLG00020001742	crnkl1	84	85.079	ENSANAG00000024889	CRNKL1	99	85.079	Aotus_nancymaae
ENSORLG00020001742	crnkl1	96	88.781	ENSACLG00000010813	crnkl1	100	86.772	Astatotilapia_calliptera
ENSORLG00020001742	crnkl1	89	89.774	ENSAMXG00000018334	crnkl1	95	86.364	Astyanax_mexicanus
ENSORLG00020001742	crnkl1	89	86.186	ENSBTAG00000008472	CRNKL1	96	86.186	Bos_taurus
ENSORLG00020001742	crnkl1	86	64.486	WBGene00019762	M03F8.3	88	64.599	Caenorhabditis_elegans
ENSORLG00020001742	crnkl1	89	85.586	ENSCJAG00000005393	CRNKL1	99	83.796	Callithrix_jacchus
ENSORLG00020001742	crnkl1	89	86.082	ENSCAFG00000005333	CRNKL1	91	86.186	Canis_familiaris
ENSORLG00020001742	crnkl1	89	86.186	ENSCAFG00020027488	CRNKL1	97	86.186	Canis_lupus_dingo
ENSORLG00020001742	crnkl1	89	85.285	ENSCHIG00000013171	CRNKL1	96	85.285	Capra_hircus
ENSORLG00020001742	crnkl1	89	85.435	ENSTSYG00000004197	CRNKL1	97	85.435	Carlito_syrichta
ENSORLG00020001742	crnkl1	80	83.833	ENSCAPG00000010501	CRNKL1	96	83.833	Cavia_aperea
ENSORLG00020001742	crnkl1	89	84.985	ENSCPOG00000004418	CRNKL1	97	84.985	Cavia_porcellus
ENSORLG00020001742	crnkl1	89	85.736	ENSCCAG00000027037	CRNKL1	97	85.736	Cebus_capucinus
ENSORLG00020001742	crnkl1	89	85.285	ENSCATG00000034247	CRNKL1	97	85.285	Cercocebus_atys
ENSORLG00020001742	crnkl1	89	85.285	ENSCLAG00000013859	CRNKL1	97	85.285	Chinchilla_lanigera
ENSORLG00020001742	crnkl1	89	85.285	ENSCSAG00000011434	CRNKL1	97	85.285	Chlorocebus_sabaeus
ENSORLG00020001742	crnkl1	89	85.325	ENSCHOG00000006371	CRNKL1	81	85.435	Choloepus_hoffmanni
ENSORLG00020001742	crnkl1	89	86.957	ENSCPBG00000023501	CRNKL1	97	86.957	Chrysemys_picta_bellii
ENSORLG00020001742	crnkl1	89	69.127	ENSCING00000002709	-	99	67.638	Ciona_intestinalis
ENSORLG00020001742	crnkl1	89	85.285	ENSCANG00000038789	CRNKL1	97	85.285	Colobus_angolensis_palliatus
ENSORLG00020001742	crnkl1	89	85.435	ENSCGRG00001000687	-	97	85.435	Cricetulus_griseus_chok1gshd
ENSORLG00020001742	crnkl1	89	85.435	ENSCGRG00001001115	-	97	85.435	Cricetulus_griseus_chok1gshd
ENSORLG00020001742	crnkl1	89	85.435	ENSCGRG00000007854	Crnkl1	97	85.435	Cricetulus_griseus_crigri
ENSORLG00020001742	crnkl1	100	83.926	ENSCSEG00000005594	crnkl1	90	87.570	Cynoglossus_semilaevis
ENSORLG00020001742	crnkl1	89	92.054	ENSCVAG00000015172	crnkl1	96	87.727	Cyprinodon_variegatus
ENSORLG00020001742	crnkl1	94	84.615	ENSDARG00000007901	crnkl1	95	84.615	Danio_rerio
ENSORLG00020001742	crnkl1	89	85.736	ENSDNOG00000016226	CRNKL1	92	85.736	Dasypus_novemcinctus
ENSORLG00020001742	crnkl1	90	78.074	ENSDORG00000023724	-	99	78.074	Dipodomys_ordii
ENSORLG00020001742	crnkl1	89	83.631	ENSDORG00000000394	-	97	83.631	Dipodomys_ordii
ENSORLG00020001742	crnkl1	91	77.253	ENSDORG00000030174	-	99	77.253	Dipodomys_ordii
ENSORLG00020001742	crnkl1	90	67.552	FBgn0000377	crn	98	66.811	Drosophila_melanogaster
ENSORLG00020001742	crnkl1	89	75.225	ENSETEG00000003711	CRNKL1	81	75.225	Echinops_telfairi
ENSORLG00020001742	crnkl1	89	63.918	ENSEBUG00000013461	crnkl1	94	56.737	Eptatretus_burgeri
ENSORLG00020001742	crnkl1	89	86.186	ENSEASG00005002072	CRNKL1	97	86.186	Equus_asinus_asinus
ENSORLG00020001742	crnkl1	89	86.186	ENSECAG00000022215	CRNKL1	97	86.186	Equus_caballus
ENSORLG00020001742	crnkl1	89	83.359	ENSEEUG00000000413	CRNKL1	90	83.483	Erinaceus_europaeus
ENSORLG00020001742	crnkl1	89	89.055	ENSELUG00000015424	crnkl1	96	88.296	Esox_lucius
ENSORLG00020001742	crnkl1	89	86.186	ENSFCAG00000000714	CRNKL1	97	86.186	Felis_catus
ENSORLG00020001742	crnkl1	87	84.380	ENSFALG00000004611	CRNKL1	97	84.380	Ficedula_albicollis
ENSORLG00020001742	crnkl1	89	85.135	ENSFDAG00000000604	CRNKL1	97	85.135	Fukomys_damarensis
ENSORLG00020001742	crnkl1	100	83.268	ENSFHEG00000013163	crnkl1	100	85.026	Fundulus_heteroclitus
ENSORLG00020001742	crnkl1	89	89.072	ENSGMOG00000007609	crnkl1	94	88.331	Gadus_morhua
ENSORLG00020001742	crnkl1	89	85.907	ENSGALG00000008429	CRNKL1	97	85.907	Gallus_gallus
ENSORLG00020001742	crnkl1	90	91.654	ENSGAFG00000014249	crnkl1	94	87.658	Gambusia_affinis
ENSORLG00020001742	crnkl1	100	85.298	ENSGACG00000011852	crnkl1	93	89.444	Gasterosteus_aculeatus
ENSORLG00020001742	crnkl1	85	85.243	ENSGAGG00000021233	CRNKL1	97	85.688	Gopherus_agassizii
ENSORLG00020001742	crnkl1	89	85.285	ENSGGOG00000014176	CRNKL1	97	85.285	Gorilla_gorilla
ENSORLG00020001742	crnkl1	96	88.858	ENSHBUG00000005246	crnkl1	100	86.939	Haplochromis_burtoni
ENSORLG00020001742	crnkl1	89	85.135	ENSHGLG00000010856	CRNKL1	97	85.135	Heterocephalus_glaber_female
ENSORLG00020001742	crnkl1	89	85.135	ENSHGLG00100011521	CRNKL1	97	85.135	Heterocephalus_glaber_male
ENSORLG00020001742	crnkl1	89	89.505	ENSHCOG00000006420	crnkl1	97	88.988	Hippocampus_comes
ENSORLG00020001742	crnkl1	89	75.415	ENSIPUG00000006836	-	99	75.186	Ictalurus_punctatus
ENSORLG00020001742	crnkl1	85	70.079	ENSIPUG00000000315	-	99	70.079	Ictalurus_punctatus
ENSORLG00020001742	crnkl1	87	87.519	ENSIPUG00000006751	crnkl1	94	85.125	Ictalurus_punctatus
ENSORLG00020001742	crnkl1	89	85.736	ENSSTOG00000014747	CRNKL1	97	85.736	Ictidomys_tridecemlineatus
ENSORLG00020001742	crnkl1	91	82.734	ENSJJAG00000016926	Crnkl1	98	82.734	Jaculus_jaculus
ENSORLG00020001742	crnkl1	96	87.396	ENSKMAG00000003620	crnkl1	90	88.636	Kryptolebias_marmoratus
ENSORLG00020001742	crnkl1	90	74.815	ENSLBEG00000003543	crnkl1	93	74.465	Labrus_bergylta
ENSORLG00020001742	crnkl1	89	87.406	ENSLACG00000001129	CRNKL1	100	85.965	Latimeria_chalumnae
ENSORLG00020001742	crnkl1	89	90.376	ENSLOCG00000016889	crnkl1	93	89.881	Lepisosteus_oculatus
ENSORLG00020001742	crnkl1	91	83.673	ENSLAFG00000004512	CRNKL1	99	84.402	Loxodonta_africana
ENSORLG00020001742	crnkl1	89	85.285	ENSMFAG00000039893	CRNKL1	97	85.285	Macaca_fascicularis
ENSORLG00020001742	crnkl1	89	85.285	ENSMMUG00000007709	CRNKL1	97	85.285	Macaca_mulatta
ENSORLG00020001742	crnkl1	89	85.285	ENSMNEG00000037490	CRNKL1	97	85.285	Macaca_nemestrina
ENSORLG00020001742	crnkl1	89	85.285	ENSMLEG00000034885	CRNKL1	97	85.285	Mandrillus_leucophaeus
ENSORLG00020001742	crnkl1	95	89.636	ENSMAMG00000008757	crnkl1	94	89.636	Mastacembelus_armatus
ENSORLG00020001742	crnkl1	100	87.020	ENSMZEG00005022345	crnkl1	100	86.755	Maylandia_zebra
ENSORLG00020001742	crnkl1	89	85.180	ENSMGAG00000003452	CRNKL1	92	85.180	Meleagris_gallopavo
ENSORLG00020001742	crnkl1	89	85.435	ENSMAUG00000020764	Crnkl1	97	85.435	Mesocricetus_auratus
ENSORLG00020001742	crnkl1	89	85.435	ENSMICG00000006048	CRNKL1	97	85.435	Microcebus_murinus
ENSORLG00020001742	crnkl1	89	61.898	ENSMOCG00000004179	-	95	61.976	Microtus_ochrogaster
ENSORLG00020001742	crnkl1	89	77.876	ENSMOCG00000000681	-	96	77.876	Microtus_ochrogaster
ENSORLG00020001742	crnkl1	85	90.981	ENSMMOG00000017601	crnkl1	97	90.981	Mola_mola
ENSORLG00020001742	crnkl1	90	80.448	ENSMODG00000010857	-	97	80.448	Monodelphis_domestica
ENSORLG00020001742	crnkl1	91	81.556	ENSMODG00000005961	-	99	81.556	Monodelphis_domestica
ENSORLG00020001742	crnkl1	95	63.916	ENSMALG00000011211	crnkl1	94	72.028	Monopterus_albus
ENSORLG00020001742	crnkl1	89	85.736	MGP_CAROLIEiJ_G0024394	Crnkl1	97	85.736	Mus_caroli
ENSORLG00020001742	crnkl1	89	85.736	ENSMUSG00000001767	Crnkl1	97	85.736	Mus_musculus
ENSORLG00020001742	crnkl1	89	84.535	MGP_PahariEiJ_G0025838	Crnkl1	97	84.535	Mus_pahari
ENSORLG00020001742	crnkl1	89	85.586	MGP_SPRETEiJ_G0025312	Crnkl1	97	85.586	Mus_spretus
ENSORLG00020001742	crnkl1	89	86.186	ENSMPUG00000001226	CRNKL1	97	86.186	Mustela_putorius_furo
ENSORLG00020001742	crnkl1	89	85.498	ENSMLUG00000016513	CRNKL1	86	85.607	Myotis_lucifugus
ENSORLG00020001742	crnkl1	89	83.358	ENSNGAG00000023097	Crnkl1	97	83.358	Nannospalax_galili
ENSORLG00020001742	crnkl1	96	88.781	ENSNBRG00000007867	crnkl1	95	88.781	Neolamprologus_brichardi
ENSORLG00020001742	crnkl1	89	82.132	ENSNLEG00000009862	CRNKL1	97	82.132	Nomascus_leucogenys
ENSORLG00020001742	crnkl1	89	84.179	ENSMEUG00000012167	-	100	84.179	Notamacropus_eugenii
ENSORLG00020001742	crnkl1	90	80.328	ENSMEUG00000002361	-	97	80.328	Notamacropus_eugenii
ENSORLG00020001742	crnkl1	79	57.115	ENSOPRG00000009242	-	62	57.115	Ochotona_princeps
ENSORLG00020001742	crnkl1	89	85.285	ENSODEG00000012175	CRNKL1	97	85.285	Octodon_degus
ENSORLG00020001742	crnkl1	96	88.643	ENSONIG00000018728	crnkl1	100	86.842	Oreochromis_niloticus
ENSORLG00020001742	crnkl1	89	84.615	ENSOCUG00000015484	CRNKL1	80	85.329	Oryctolagus_cuniculus
ENSORLG00020001742	crnkl1	100	98.930	ENSORLG00000017240	crnkl1	100	98.930	Oryzias_latipes
ENSORLG00020001742	crnkl1	100	98.267	ENSORLG00015019564	crnkl1	100	98.267	Oryzias_latipes_hsok
ENSORLG00020001742	crnkl1	100	95.594	ENSOMEG00000019895	crnkl1	100	95.594	Oryzias_melastigma
ENSORLG00020001742	crnkl1	89	85.285	ENSOGAG00000011544	CRNKL1	99	83.212	Otolemur_garnettii
ENSORLG00020001742	crnkl1	89	86.233	ENSOARG00000002150	CRNKL1	87	86.336	Ovis_aries
ENSORLG00020001742	crnkl1	89	84.115	ENSPPAG00000027847	CRNKL1	81	84.234	Pan_paniscus
ENSORLG00020001742	crnkl1	89	86.186	ENSPPRG00000001955	CRNKL1	97	86.186	Panthera_pardus
ENSORLG00020001742	crnkl1	89	86.186	ENSPTIG00000007393	CRNKL1	97	86.186	Panthera_tigris_altaica
ENSORLG00020001742	crnkl1	89	85.285	ENSPTRG00000030609	CRNKL1	97	85.285	Pan_troglodytes
ENSORLG00020001742	crnkl1	89	85.285	ENSPANG00000017420	CRNKL1	97	85.285	Papio_anubis
ENSORLG00020001742	crnkl1	99	76.640	ENSPKIG00000017093	crnkl1	99	76.772	Paramormyrops_kingsleyae
ENSORLG00020001742	crnkl1	89	85.693	ENSPSIG00000012705	CRNKL1	97	85.693	Pelodiscus_sinensis
ENSORLG00020001742	crnkl1	90	84.673	ENSPMGG00000006263	crnkl1	97	83.431	Periophthalmus_magnuspinnatus
ENSORLG00020001742	crnkl1	89	85.586	ENSPEMG00000000073	-	96	85.586	Peromyscus_maniculatus_bairdii
ENSORLG00020001742	crnkl1	90	82.318	ENSPMAG00000002250	crnkl1	97	82.318	Petromyzon_marinus
ENSORLG00020001742	crnkl1	90	85.075	ENSPCIG00000025825	CRNKL1	94	85.075	Phascolarctos_cinereus
ENSORLG00020001742	crnkl1	90	91.505	ENSPFOG00000005102	crnkl1	96	87.955	Poecilia_formosa
ENSORLG00020001742	crnkl1	99	85.849	ENSPLAG00000007288	crnkl1	96	86.351	Poecilia_latipinna
ENSORLG00020001742	crnkl1	90	91.654	ENSPMEG00000008865	crnkl1	97	88.095	Poecilia_mexicana
ENSORLG00020001742	crnkl1	89	91.604	ENSPREG00000012615	crnkl1	96	87.083	Poecilia_reticulata
ENSORLG00020001742	crnkl1	89	85.023	ENSPPYG00000010747	CRNKL1	79	85.135	Pongo_abelii
ENSORLG00020001742	crnkl1	89	81.089	ENSPCAG00000003296	CRNKL1	83	81.231	Procavia_capensis
ENSORLG00020001742	crnkl1	89	83.964	ENSPCOG00000017608	CRNKL1	81	84.084	Propithecus_coquereli
ENSORLG00020001742	crnkl1	89	85.930	ENSPVAG00000006207	CRNKL1	81	86.036	Pteropus_vampyrus
ENSORLG00020001742	crnkl1	96	88.643	ENSPNYG00000001977	crnkl1	100	86.262	Pundamilia_nyererei
ENSORLG00020001742	crnkl1	90	89.466	ENSPNAG00000001507	crnkl1	96	86.547	Pygocentrus_nattereri
ENSORLG00020001742	crnkl1	89	85.736	ENSRNOG00000010587	Crnkl1	97	85.736	Rattus_norvegicus
ENSORLG00020001742	crnkl1	89	85.586	ENSRNOG00000040045	Crnkl1	97	85.586	Rattus_norvegicus
ENSORLG00020001742	crnkl1	89	85.285	ENSRBIG00000031770	CRNKL1	99	83.212	Rhinopithecus_bieti
ENSORLG00020001742	crnkl1	89	85.135	ENSRROG00000040450	CRNKL1	99	83.066	Rhinopithecus_roxellana
ENSORLG00020001742	crnkl1	87	37.826	YLR117C	CLF1	99	37.826	Saccharomyces_cerevisiae
ENSORLG00020001742	crnkl1	92	83.504	ENSSBOG00000029672	CRNKL1	99	83.504	Saimiri_boliviensis_boliviensis
ENSORLG00020001742	crnkl1	88	69.559	ENSSHAG00000011199	CRNKL1	99	69.559	Sarcophilus_harrisii
ENSORLG00020001742	crnkl1	89	89.291	ENSSFOG00015000946	crnkl1	88	88.444	Scleropages_formosus
ENSORLG00020001742	crnkl1	95	87.500	ENSSMAG00000007933	crnkl1	100	84.088	Scophthalmus_maximus
ENSORLG00020001742	crnkl1	95	81.627	ENSSDUG00000012625	crnkl1	92	81.616	Seriola_dumerili
ENSORLG00020001742	crnkl1	96	87.912	ENSSLDG00000021413	crnkl1	93	89.121	Seriola_lalandi_dorsalis
ENSORLG00020001742	crnkl1	89	85.285	ENSSARG00000006443	CRNKL1	80	85.285	Sorex_araneus
ENSORLG00020001742	crnkl1	90	85.693	ENSSPUG00000005254	CRNKL1	98	85.693	Sphenodon_punctatus
ENSORLG00020001742	crnkl1	96	89.972	ENSSPAG00000016150	crnkl1	100	85.788	Stegastes_partitus
ENSORLG00020001742	crnkl1	89	86.186	ENSSSCG00000038587	CRNKL1	96	86.186	Sus_scrofa
ENSORLG00020001742	crnkl1	100	85.030	ENSTGUG00000007645	CRNKL1	96	85.030	Taeniopygia_guttata
ENSORLG00020001742	crnkl1	90	85.693	ENSTRUG00000015417	crnkl1	91	84.694	Takifugu_rubripes
ENSORLG00020001742	crnkl1	90	89.985	ENSTNIG00000010710	crnkl1	99	87.681	Tetraodon_nigroviridis
ENSORLG00020001742	crnkl1	84	83.360	ENSTBEG00000001304	CRNKL1	82	83.492	Tupaia_belangeri
ENSORLG00020001742	crnkl1	84	81.280	ENSTTRG00000000484	CRNKL1	81	81.429	Tursiops_truncatus
ENSORLG00020001742	crnkl1	89	86.186	ENSUAMG00000018586	CRNKL1	97	86.186	Ursus_americanus
ENSORLG00020001742	crnkl1	89	86.186	ENSUMAG00000024957	CRNKL1	97	86.186	Ursus_maritimus
ENSORLG00020001742	crnkl1	89	86.082	ENSVVUG00000012559	CRNKL1	80	86.186	Vulpes_vulpes
ENSORLG00020001742	crnkl1	92	84.884	ENSXETG00000009698	crnkl1	100	84.279	Xenopus_tropicalis
ENSORLG00020001742	crnkl1	90	90.327	ENSXCOG00000000824	crnkl1	96	86.188	Xiphophorus_couchianus
ENSORLG00020001742	crnkl1	90	91.505	ENSXMAG00000006896	crnkl1	91	90.882	Xiphophorus_maculatus