EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020001780 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 194021 bases
Position: chr5:6018970-6212990
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020001071	zf-CCHC	PF00098.23	0.00031	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020013636	-	1104	-	ENSORLP00020001071	367 (aa)	-	-

Gene Model

Click here to download ENSORLG00020001780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020001780's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020001780	-	88	69.444	ENSORLG00020020969	-	81	69.444
ENSORLG00020001780	-	88	61.801	ENSORLG00020007518	-	89	61.801

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020001780	-	56	30.622	ENSACAG00000005423	-	88	30.622	Anolis_carolinensis
ENSORLG00020001780	-	90	32.565	ENSAMXG00000042165	-	89	32.653	Astyanax_mexicanus
ENSORLG00020001780	-	65	36.134	ENSAMXG00000036244	-	69	35.448	Astyanax_mexicanus
ENSORLG00020001780	-	89	31.402	ENSFHEG00000001818	-	79	31.402	Fundulus_heteroclitus
ENSORLG00020001780	-	88	33.028	ENSHBUG00000010718	-	94	32.110	Haplochromis_burtoni
ENSORLG00020001780	-	86	36.420	ENSHCOG00000001473	-	89	36.728	Hippocampus_comes
ENSORLG00020001780	-	54	35.961	ENSLOCG00000010704	-	93	35.961	Lepisosteus_oculatus
ENSORLG00020001780	-	68	37.849	ENSMZEG00005021915	-	74	37.008	Maylandia_zebra
ENSORLG00020001780	-	88	33.333	ENSMZEG00005007727	-	94	32.416	Maylandia_zebra
ENSORLG00020001780	-	95	60.335	ENSORLG00000027391	-	94	61.017	Oryzias_latipes
ENSORLG00020001780	-	88	82.919	ENSORLG00000023496	-	92	82.919	Oryzias_latipes
ENSORLG00020001780	-	88	82.663	ENSORLG00000029602	-	91	81.957	Oryzias_latipes
ENSORLG00020001780	-	86	36.050	ENSPREG00000001860	-	85	36.050	Poecilia_reticulata
ENSORLG00020001780	-	76	34.507	ENSPNAG00000026690	-	72	34.507	Pygocentrus_nattereri
ENSORLG00020001780	-	65	32.645	ENSPNAG00000011784	-	77	32.645	Pygocentrus_nattereri