EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020001824 (Gene tree)
Gene ID: -
Gene Symbol: xrn2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 29596 bases
Position: chr24:14792912-14822507
Accession: ZDB-GENE-040426-2874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020001110	XRN_N	PF03159.18	3e-101	1	1
ENSORLP00020001097	XRN_N	PF03159.18	3.1e-101	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020013576	-	5948	-	ENSORLP00020001110	961 (aa)	-	-
ENSORLT00020013603	-	5921	-	ENSORLP00020001097	972 (aa)	-	-

Gene Model

Click here to download ENSORLG00020001824's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020001824's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020001824	xrn2	100	70.000	ENSG00000088930	XRN2	98	70.301	Homo_sapiens
ENSORLG00020001824	xrn2	97	85.638	ENSAPOG00000009818	xrn2	98	85.104	Acanthochromis_polyacanthus
ENSORLG00020001824	xrn2	100	70.061	ENSAMEG00000012581	XRN2	98	70.405	Ailuropoda_melanoleuca
ENSORLG00020001824	xrn2	91	81.941	ENSACIG00000015047	xrn2	95	86.882	Amphilophus_citrinellus
ENSORLG00020001824	xrn2	97	86.817	ENSAOCG00000023632	xrn2	98	86.354	Amphiprion_ocellaris
ENSORLG00020001824	xrn2	97	86.817	ENSAPEG00000014871	xrn2	98	86.354	Amphiprion_percula
ENSORLG00020001824	xrn2	97	85.745	ENSATEG00000001273	xrn2	99	85.177	Anabas_testudineus
ENSORLG00020001824	xrn2	94	70.957	ENSAPLG00000013869	XRN2	96	70.187	Anas_platyrhynchos
ENSORLG00020001824	xrn2	100	70.487	ENSACAG00000005565	XRN2	100	70.183	Anolis_carolinensis
ENSORLG00020001824	xrn2	100	70.102	ENSANAG00000020126	XRN2	98	70.405	Aotus_nancymaae
ENSORLG00020001824	xrn2	90	86.290	ENSACLG00000010522	xrn2	98	86.290	Astatotilapia_calliptera
ENSORLG00020001824	xrn2	100	79.391	ENSAMXG00000018301	xrn2	98	80.062	Astyanax_mexicanus
ENSORLG00020001824	xrn2	100	69.450	ENSBTAG00000011304	XRN2	98	69.886	Bos_taurus
ENSORLG00020001824	xrn2	87	54.225	WBGene00006964	xrn-2	97	51.075	Caenorhabditis_elegans
ENSORLG00020001824	xrn2	100	70.204	ENSCJAG00000005611	XRN2	98	70.509	Callithrix_jacchus
ENSORLG00020001824	xrn2	100	70.061	ENSCAFG00000005185	XRN2	98	70.405	Canis_familiaris
ENSORLG00020001824	xrn2	100	70.061	ENSCAFG00020027479	XRN2	98	70.405	Canis_lupus_dingo
ENSORLG00020001824	xrn2	100	69.552	ENSCHIG00000006921	XRN2	98	69.886	Capra_hircus
ENSORLG00020001824	xrn2	100	69.959	ENSTSYG00000008315	XRN2	98	70.301	Carlito_syrichta
ENSORLG00020001824	xrn2	97	60.255	ENSCAPG00000010773	XRN2	98	59.448	Cavia_aperea
ENSORLG00020001824	xrn2	100	70.367	ENSCPOG00000009407	XRN2	98	70.717	Cavia_porcellus
ENSORLG00020001824	xrn2	100	70.000	ENSCATG00000040350	XRN2	98	70.386	Cercocebus_atys
ENSORLG00020001824	xrn2	100	70.367	ENSCLAG00000013419	XRN2	98	70.717	Chinchilla_lanigera
ENSORLG00020001824	xrn2	100	70.000	ENSCSAG00000011094	XRN2	98	70.301	Chlorocebus_sabaeus
ENSORLG00020001824	xrn2	61	87.634	ENSCHOG00000013404	XRN2	63	87.634	Choloepus_hoffmanni
ENSORLG00020001824	xrn2	100	70.576	ENSCPBG00000023533	XRN2	98	70.795	Chrysemys_picta_bellii
ENSORLG00020001824	xrn2	86	59.670	ENSCING00000022336	-	100	60.731	Ciona_intestinalis
ENSORLG00020001824	xrn2	84	69.767	ENSCSAVG00000011217	-	96	70.602	Ciona_savignyi
ENSORLG00020001824	xrn2	100	70.000	ENSCANG00000040240	XRN2	98	70.301	Colobus_angolensis_palliatus
ENSORLG00020001824	xrn2	99	71.204	ENSCGRG00001010676	Xrn2	99	71.309	Cricetulus_griseus_chok1gshd
ENSORLG00020001824	xrn2	97	69.829	ENSCGRG00000006378	Xrn2	98	69.968	Cricetulus_griseus_crigri
ENSORLG00020001824	xrn2	54	79.271	ENSCSEG00000005628	xrn2	100	79.271	Cynoglossus_semilaevis
ENSORLG00020001824	xrn2	91	84.371	ENSCVAG00000018999	xrn2	98	91.587	Cyprinodon_variegatus
ENSORLG00020001824	xrn2	100	75.531	ENSDARG00000101900	xrn2	96	84.733	Danio_rerio
ENSORLG00020001824	xrn2	100	69.898	ENSDNOG00000001895	XRN2	98	70.239	Dasypus_novemcinctus
ENSORLG00020001824	xrn2	100	69.286	ENSDORG00000005434	Xrn2	98	69.782	Dipodomys_ordii
ENSORLG00020001824	xrn2	87	55.036	FBgn0031868	Rat1	99	52.880	Drosophila_melanogaster
ENSORLG00020001824	xrn2	91	81.022	ENSETEG00000001740	XRN2	90	81.022	Echinops_telfairi
ENSORLG00020001824	xrn2	84	69.417	ENSEBUG00000016136	xrn2	100	69.417	Eptatretus_burgeri
ENSORLG00020001824	xrn2	100	69.929	ENSEASG00005002484	XRN2	98	70.374	Equus_asinus_asinus
ENSORLG00020001824	xrn2	94	92.308	ENSECAG00000018988	XRN2	95	92.308	Equus_caballus
ENSORLG00020001824	xrn2	67	96.000	ENSEEUG00000009265	XRN2	67	96.000	Erinaceus_europaeus
ENSORLG00020001824	xrn2	100	79.573	ENSELUG00000000552	xrn2	98	80.021	Esox_lucius
ENSORLG00020001824	xrn2	100	69.857	ENSFCAG00000007970	XRN2	98	70.197	Felis_catus
ENSORLG00020001824	xrn2	95	72.835	ENSFALG00000004508	XRN2	96	72.835	Ficedula_albicollis
ENSORLG00020001824	xrn2	100	70.061	ENSFDAG00000016311	XRN2	98	70.405	Fukomys_damarensis
ENSORLG00020001824	xrn2	54	82.759	ENSFHEG00000013039	xrn2	98	82.759	Fundulus_heteroclitus
ENSORLG00020001824	xrn2	86	79.472	ENSGMOG00000013436	xrn2	100	79.472	Gadus_morhua
ENSORLG00020001824	xrn2	100	69.867	ENSGALG00000008372	XRN2	98	69.439	Gallus_gallus
ENSORLG00020001824	xrn2	90	86.651	ENSGAFG00000014284	xrn2	99	86.651	Gambusia_affinis
ENSORLG00020001824	xrn2	87	83.829	ENSGACG00000011870	xrn2	96	88.676	Gasterosteus_aculeatus
ENSORLG00020001824	xrn2	99	70.795	ENSGAGG00000004884	XRN2	98	71.001	Gopherus_agassizii
ENSORLG00020001824	xrn2	100	70.000	ENSGGOG00000013738	XRN2	98	70.301	Gorilla_gorilla
ENSORLG00020001824	xrn2	54	87.931	ENSHBUG00000005077	xrn2	94	87.931	Haplochromis_burtoni
ENSORLG00020001824	xrn2	100	68.941	ENSHGLG00000014831	XRN2	98	69.263	Heterocephalus_glaber_female
ENSORLG00020001824	xrn2	100	68.941	ENSHGLG00100013130	XRN2	98	69.263	Heterocephalus_glaber_male
ENSORLG00020001824	xrn2	99	79.585	ENSHCOG00000011994	xrn2	98	80.311	Hippocampus_comes
ENSORLG00020001824	xrn2	100	78.419	ENSIPUG00000006639	xrn2	99	78.498	Ictalurus_punctatus
ENSORLG00020001824	xrn2	100	69.675	ENSSTOG00000000589	XRN2	98	70.010	Ictidomys_tridecemlineatus
ENSORLG00020001824	xrn2	100	70.408	ENSJJAG00000022128	Xrn2	98	70.717	Jaculus_jaculus
ENSORLG00020001824	xrn2	54	86.948	ENSLBEG00000010041	xrn2	100	86.948	Labrus_bergylta
ENSORLG00020001824	xrn2	94	72.421	ENSLACG00000008307	XRN2	97	75.586	Latimeria_chalumnae
ENSORLG00020001824	xrn2	100	72.449	ENSLOCG00000016874	xrn2	93	80.377	Lepisosteus_oculatus
ENSORLG00020001824	xrn2	100	70.306	ENSLAFG00000014624	XRN2	98	70.717	Loxodonta_africana
ENSORLG00020001824	xrn2	100	70.000	ENSMFAG00000038122	XRN2	98	70.301	Macaca_fascicularis
ENSORLG00020001824	xrn2	100	70.000	ENSMMUG00000011405	XRN2	98	70.301	Macaca_mulatta
ENSORLG00020001824	xrn2	100	70.102	ENSMNEG00000040626	XRN2	98	70.405	Macaca_nemestrina
ENSORLG00020001824	xrn2	100	69.898	ENSMLEG00000041897	XRN2	98	70.197	Mandrillus_leucophaeus
ENSORLG00020001824	xrn2	96	86.304	ENSMAMG00000008633	xrn2	99	85.073	Mastacembelus_armatus
ENSORLG00020001824	xrn2	90	88.134	ENSMZEG00005022362	xrn2	98	88.134	Maylandia_zebra
ENSORLG00020001824	xrn2	99	68.852	ENSMGAG00000003196	XRN2	97	70.476	Meleagris_gallopavo
ENSORLG00020001824	xrn2	100	70.570	ENSMAUG00000021842	Xrn2	98	70.924	Mesocricetus_auratus
ENSORLG00020001824	xrn2	100	69.929	ENSMICG00000008126	XRN2	98	70.270	Microcebus_murinus
ENSORLG00020001824	xrn2	100	69.929	ENSMOCG00000012588	Xrn2	98	70.417	Microtus_ochrogaster
ENSORLG00020001824	xrn2	90	84.545	ENSMMOG00000017576	xrn2	97	84.545	Mola_mola
ENSORLG00020001824	xrn2	100	70.787	ENSMODG00000006163	XRN2	98	71.160	Monodelphis_domestica
ENSORLG00020001824	xrn2	91	84.414	ENSMALG00000011355	xrn2	95	90.211	Monopterus_albus
ENSORLG00020001824	xrn2	100	70.612	MGP_CAROLIEiJ_G0024400	Xrn2	98	70.968	Mus_caroli
ENSORLG00020001824	xrn2	100	70.612	ENSMUSG00000027433	Xrn2	98	70.968	Mus_musculus
ENSORLG00020001824	xrn2	100	70.510	MGP_PahariEiJ_G0025843	Xrn2	98	70.864	Mus_pahari
ENSORLG00020001824	xrn2	100	70.612	MGP_SPRETEiJ_G0025318	Xrn2	94	83.838	Mus_spretus
ENSORLG00020001824	xrn2	100	68.437	ENSMPUG00000001198	XRN2	92	68.744	Mustela_putorius_furo
ENSORLG00020001824	xrn2	100	69.561	ENSMLUG00000001536	XRN2	98	69.958	Myotis_lucifugus
ENSORLG00020001824	xrn2	100	70.816	ENSNGAG00000018138	Xrn2	98	71.132	Nannospalax_galili
ENSORLG00020001824	xrn2	90	88.249	ENSNBRG00000008062	xrn2	98	88.249	Neolamprologus_brichardi
ENSORLG00020001824	xrn2	100	70.000	ENSNLEG00000009991	XRN2	98	70.301	Nomascus_leucogenys
ENSORLG00020001824	xrn2	65	86.667	ENSMEUG00000008622	-	53	86.667	Notamacropus_eugenii
ENSORLG00020001824	xrn2	61	72.105	ENSOPRG00000001397	-	63	72.105	Ochotona_princeps
ENSORLG00020001824	xrn2	100	69.959	ENSODEG00000010745	-	98	70.301	Octodon_degus
ENSORLG00020001824	xrn2	98	63.915	ENSODEG00000000860	-	99	63.848	Octodon_degus
ENSORLG00020001824	xrn2	100	82.591	ENSONIG00000018720	xrn2	98	82.328	Oreochromis_niloticus
ENSORLG00020001824	xrn2	100	69.807	ENSOANG00000015673	XRN2	98	69.470	Ornithorhynchus_anatinus
ENSORLG00020001824	xrn2	100	70.163	ENSOCUG00000013468	XRN2	98	70.509	Oryctolagus_cuniculus
ENSORLG00020001824	xrn2	100	99.588	ENSORLG00000017213	xrn2	100	99.588	Oryzias_latipes
ENSORLG00020001824	xrn2	100	98.868	ENSORLG00015019747	xrn2	100	98.868	Oryzias_latipes_hsok
ENSORLG00020001824	xrn2	98	92.895	ENSOMEG00000019820	xrn2	98	93.319	Oryzias_melastigma
ENSORLG00020001824	xrn2	100	70.061	ENSOGAG00000001068	XRN2	98	70.405	Otolemur_garnettii
ENSORLG00020001824	xrn2	97	69.124	ENSOARG00000004443	XRN2	98	69.264	Ovis_aries
ENSORLG00020001824	xrn2	100	70.000	ENSPPAG00000033549	XRN2	98	70.301	Pan_paniscus
ENSORLG00020001824	xrn2	100	69.857	ENSPPRG00000008732	XRN2	98	70.197	Panthera_pardus
ENSORLG00020001824	xrn2	97	69.444	ENSPTIG00000015683	XRN2	96	69.584	Panthera_tigris_altaica
ENSORLG00020001824	xrn2	100	70.000	ENSPTRG00000013308	XRN2	98	70.301	Pan_troglodytes
ENSORLG00020001824	xrn2	100	70.000	ENSPANG00000018088	XRN2	98	70.301	Papio_anubis
ENSORLG00020001824	xrn2	100	76.962	ENSPKIG00000016889	xrn2	98	76.939	Paramormyrops_kingsleyae
ENSORLG00020001824	xrn2	81	75.481	ENSPSIG00000014666	XRN2	100	75.481	Pelodiscus_sinensis
ENSORLG00020001824	xrn2	100	70.367	ENSPEMG00000000111	Xrn2	98	70.717	Peromyscus_maniculatus_bairdii
ENSORLG00020001824	xrn2	100	82.172	ENSPFOG00000004182	xrn2	98	83.316	Poecilia_formosa
ENSORLG00020001824	xrn2	91	86.286	ENSPLAG00000007351	xrn2	98	86.286	Poecilia_latipinna
ENSORLG00020001824	xrn2	94	82.131	ENSPMEG00000011798	xrn2	98	82.431	Poecilia_mexicana
ENSORLG00020001824	xrn2	91	86.942	ENSPREG00000012452	xrn2	98	86.942	Poecilia_reticulata
ENSORLG00020001824	xrn2	100	69.459	ENSPPYG00000010755	XRN2	98	69.751	Pongo_abelii
ENSORLG00020001824	xrn2	100	65.784	ENSPCAG00000011191	XRN2	98	66.250	Procavia_capensis
ENSORLG00020001824	xrn2	100	64.220	ENSPCOG00000016468	XRN2	98	64.449	Propithecus_coquereli
ENSORLG00020001824	xrn2	93	66.135	ENSPVAG00000004596	XRN2	91	66.135	Pteropus_vampyrus
ENSORLG00020001824	xrn2	90	86.290	ENSPNYG00000001765	xrn2	98	86.290	Pundamilia_nyererei
ENSORLG00020001824	xrn2	100	78.499	ENSPNAG00000010956	xrn2	98	79.046	Pygocentrus_nattereri
ENSORLG00020001824	xrn2	100	70.600	ENSRNOG00000011785	Xrn2	98	70.954	Rattus_norvegicus
ENSORLG00020001824	xrn2	86	75.933	ENSRBIG00000036193	XRN2	100	75.933	Rhinopithecus_bieti
ENSORLG00020001824	xrn2	100	69.898	ENSRROG00000044400	XRN2	89	70.301	Rhinopithecus_roxellana
ENSORLG00020001824	xrn2	99	38.563	YOR048C	RAT1	80	53.623	Saccharomyces_cerevisiae
ENSORLG00020001824	xrn2	100	70.204	ENSSBOG00000021014	XRN2	98	70.509	Saimiri_boliviensis_boliviensis
ENSORLG00020001824	xrn2	100	77.618	ENSSFOG00015001091	xrn2	98	77.975	Scleropages_formosus
ENSORLG00020001824	xrn2	91	86.234	ENSSMAG00000007834	xrn2	98	83.212	Scophthalmus_maximus
ENSORLG00020001824	xrn2	96	83.082	ENSSDUG00000012802	xrn2	99	86.234	Seriola_dumerili
ENSORLG00020001824	xrn2	93	88.076	ENSSLDG00000021273	xrn2	100	88.076	Seriola_lalandi_dorsalis
ENSORLG00020001824	xrn2	54	96.000	ENSSARG00000005859	-	54	96.000	Sorex_araneus
ENSORLG00020001824	xrn2	96	69.892	ENSSPUG00000005485	XRN2	94	69.892	Sphenodon_punctatus
ENSORLG00020001824	xrn2	100	84.410	ENSSPAG00000016027	xrn2	98	85.266	Stegastes_partitus
ENSORLG00020001824	xrn2	100	68.534	ENSSSCG00000007109	XRN2	99	67.963	Sus_scrofa
ENSORLG00020001824	xrn2	95	71.598	ENSTGUG00000007535	XRN2	96	71.598	Taeniopygia_guttata
ENSORLG00020001824	xrn2	100	79.637	ENSTRUG00000015489	xrn2	98	80.923	Takifugu_rubripes
ENSORLG00020001824	xrn2	100	76.758	ENSTNIG00000010712	xrn2	93	80.485	Tetraodon_nigroviridis
ENSORLG00020001824	xrn2	100	69.857	ENSTBEG00000004119	XRN2	98	70.197	Tupaia_belangeri
ENSORLG00020001824	xrn2	93	78.169	ENSTTRG00000009087	XRN2	91	78.169	Tursiops_truncatus
ENSORLG00020001824	xrn2	100	70.061	ENSUAMG00000024634	XRN2	98	70.405	Ursus_americanus
ENSORLG00020001824	xrn2	97	69.658	ENSUMAG00000004012	XRN2	93	69.691	Ursus_maritimus
ENSORLG00020001824	xrn2	82	84.142	ENSVPAG00000010694	XRN2	83	84.142	Vicugna_pacos
ENSORLG00020001824	xrn2	100	70.061	ENSVVUG00000012178	XRN2	98	70.405	Vulpes_vulpes
ENSORLG00020001824	xrn2	100	70.133	ENSXETG00000023501	xrn2	99	71.882	Xenopus_tropicalis
ENSORLG00020001824	xrn2	100	82.275	ENSXMAG00000000242	xrn2	92	89.538	Xiphophorus_maculatus