EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020002214 (Gene tree)
Gene ID: -
Gene Symbol: SCAF8
Alias: -
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 77187 bases
Position: chr22:15630661-15707847
Accession: 20959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020001513	RRM_1	PF00076.22	4e-08	1	1
ENSORLP00020001517	RRM_1	PF00076.22	4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020012893	SCAF8-201	4642	-	ENSORLP00020001517	1378 (aa)	-	-
ENSORLT00020012897	SCAF8-202	6073	-	ENSORLP00020001513	1378 (aa)	-	-

Gene Model

Click here to download ENSORLG00020002214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020002214's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020002214	SCAF8	78	67.788	ENSG00000213079	SCAF8	86	69.051	Homo_sapiens
ENSORLG00020002214	SCAF8	100	81.369	ENSAPOG00000015527	SCAF8	100	81.087	Acanthochromis_polyacanthus
ENSORLG00020002214	SCAF8	78	66.237	ENSAMEG00000007583	SCAF8	83	67.548	Ailuropoda_melanoleuca
ENSORLG00020002214	SCAF8	100	80.563	ENSAOCG00000002421	SCAF8	100	80.845	Amphiprion_ocellaris
ENSORLG00020002214	SCAF8	98	71.481	ENSAPEG00000020115	SCAF8	68	66.274	Amphiprion_percula
ENSORLG00020002214	SCAF8	78	82.288	ENSATEG00000006959	SCAF8	95	82.255	Anabas_testudineus
ENSORLG00020002214	SCAF8	78	70.681	ENSAPLG00000005765	SCAF8	92	67.774	Anas_platyrhynchos
ENSORLG00020002214	SCAF8	75	71.963	ENSACAG00000005282	SCAF8	81	71.429	Anolis_carolinensis
ENSORLG00020002214	SCAF8	78	68.350	ENSANAG00000036184	SCAF8	86	69.051	Aotus_nancymaae
ENSORLG00020002214	SCAF8	100	78.890	ENSACLG00000018828	SCAF8	100	78.602	Astatotilapia_calliptera
ENSORLG00020002214	SCAF8	78	68.919	ENSBTAG00000031917	SCAF8	86	69.042	Bos_taurus
ENSORLG00020002214	SCAF8	78	69.297	ENSCJAG00000012631	SCAF8	83	67.548	Callithrix_jacchus
ENSORLG00020002214	SCAF8	77	69.164	ENSCAFG00000000570	SCAF8	85	69.288	Canis_familiaris
ENSORLG00020002214	SCAF8	77	69.164	ENSCAFG00020015048	SCAF8	84	69.288	Canis_lupus_dingo
ENSORLG00020002214	SCAF8	78	68.919	ENSCHIG00000025041	SCAF8	86	69.042	Capra_hircus
ENSORLG00020002214	SCAF8	78	66.947	ENSTSYG00000010991	SCAF8	85	66.947	Carlito_syrichta
ENSORLG00020002214	SCAF8	58	70.667	ENSCAPG00000003300	SCAF8	71	69.231	Cavia_aperea
ENSORLG00020002214	SCAF8	78	49.832	ENSCPOG00000030311	-	56	65.657	Cavia_porcellus
ENSORLG00020002214	SCAF8	77	57.196	ENSCPOG00000022216	-	86	57.816	Cavia_porcellus
ENSORLG00020002214	SCAF8	78	67.788	ENSCCAG00000024952	SCAF8	86	69.174	Cebus_capucinus
ENSORLG00020002214	SCAF8	77	68.914	ENSCATG00000035361	SCAF8	86	69.051	Cercocebus_atys
ENSORLG00020002214	SCAF8	78	67.853	ENSCLAG00000004910	SCAF8	86	68.323	Chinchilla_lanigera
ENSORLG00020002214	SCAF8	78	66.120	ENSCSAG00000013430	SCAF8	86	67.308	Chlorocebus_sabaeus
ENSORLG00020002214	SCAF8	78	69.592	ENSCPBG00000016330	SCAF8	81	69.278	Chrysemys_picta_bellii
ENSORLG00020002214	SCAF8	78	68.927	ENSCANG00000039499	SCAF8	85	68.789	Colobus_angolensis_palliatus
ENSORLG00020002214	SCAF8	54	72.382	ENSCGRG00001020167	Scaf8	93	57.037	Cricetulus_griseus_chok1gshd
ENSORLG00020002214	SCAF8	54	71.937	ENSCGRG00000004120	Scaf8	92	56.799	Cricetulus_griseus_crigri
ENSORLG00020002214	SCAF8	100	75.656	ENSCSEG00000000043	-	100	76.031	Cynoglossus_semilaevis
ENSORLG00020002214	SCAF8	96	74.963	ENSCVAG00000000925	SCAF8	99	74.963	Cyprinodon_variegatus
ENSORLG00020002214	SCAF8	74	65.985	ENSDNOG00000025271	SCAF8	87	65.473	Dasypus_novemcinctus
ENSORLG00020002214	SCAF8	77	67.394	ENSDORG00000006391	Scaf8	92	55.519	Dipodomys_ordii
ENSORLG00020002214	SCAF8	78	66.745	ENSEASG00005018879	SCAF8	88	67.335	Equus_asinus_asinus
ENSORLG00020002214	SCAF8	78	69.127	ENSECAG00000005540	SCAF8	86	69.174	Equus_caballus
ENSORLG00020002214	SCAF8	76	70.297	ENSELUG00000002779	SCAF8	100	60.026	Esox_lucius
ENSORLG00020002214	SCAF8	78	68.659	ENSFCAG00000023424	SCAF8	87	68.697	Felis_catus
ENSORLG00020002214	SCAF8	75	69.661	ENSFALG00000012433	SCAF8	93	68.148	Ficedula_albicollis
ENSORLG00020002214	SCAF8	78	68.272	ENSFDAG00000010335	SCAF8	85	68.272	Fukomys_damarensis
ENSORLG00020002214	SCAF8	100	76.496	ENSFHEG00000008284	SCAF8	100	76.754	Fundulus_heteroclitus
ENSORLG00020002214	SCAF8	65	77.540	ENSGMOG00000018812	SCAF8	83	77.540	Gadus_morhua
ENSORLG00020002214	SCAF8	77	67.099	ENSGALG00000013635	SCAF8	91	66.901	Gallus_gallus
ENSORLG00020002214	SCAF8	100	75.141	ENSGAFG00000018033	SCAF8	100	75.921	Gambusia_affinis
ENSORLG00020002214	SCAF8	78	78.044	ENSGACG00000006909	SCAF8	99	78.354	Gasterosteus_aculeatus
ENSORLG00020002214	SCAF8	78	67.788	ENSGGOG00000008645	SCAF8	86	69.051	Gorilla_gorilla
ENSORLG00020002214	SCAF8	100	78.746	ENSHBUG00000019537	SCAF8	100	78.458	Haplochromis_burtoni
ENSORLG00020002214	SCAF8	78	67.389	ENSHGLG00000003619	SCAF8	86	68.642	Heterocephalus_glaber_female
ENSORLG00020002214	SCAF8	77	67.235	ENSHGLG00100004708	SCAF8	86	68.500	Heterocephalus_glaber_male
ENSORLG00020002214	SCAF8	77	69.000	ENSSTOG00000026043	SCAF8	85	69.000	Ictidomys_tridecemlineatus
ENSORLG00020002214	SCAF8	77	68.317	ENSJJAG00000020480	Scaf8	92	55.927	Jaculus_jaculus
ENSORLG00020002214	SCAF8	100	80.158	ENSKMAG00000012767	SCAF8	100	80.158	Kryptolebias_marmoratus
ENSORLG00020002214	SCAF8	83	95.149	ENSLBEG00000012484	-	92	92.282	Labrus_bergylta
ENSORLG00020002214	SCAF8	78	64.049	ENSLOCG00000016856	SCAF8	93	64.468	Lepisosteus_oculatus
ENSORLG00020002214	SCAF8	75	72.099	ENSLAFG00000000022	SCAF8	93	56.490	Loxodonta_africana
ENSORLG00020002214	SCAF8	78	67.788	ENSMFAG00000032738	SCAF8	86	69.051	Macaca_fascicularis
ENSORLG00020002214	SCAF8	78	67.788	ENSMMUG00000015163	SCAF8	86	69.051	Macaca_mulatta
ENSORLG00020002214	SCAF8	77	68.914	ENSMNEG00000043466	SCAF8	86	69.051	Macaca_nemestrina
ENSORLG00020002214	SCAF8	77	69.039	ENSMLEG00000034845	SCAF8	85	69.039	Mandrillus_leucophaeus
ENSORLG00020002214	SCAF8	97	76.170	ENSMAMG00000009457	SCAF8	100	76.462	Mastacembelus_armatus
ENSORLG00020002214	SCAF8	100	78.818	ENSMZEG00005005698	SCAF8	100	78.530	Maylandia_zebra
ENSORLG00020002214	SCAF8	78	68.519	ENSMGAG00000012762	SCAF8	92	68.642	Meleagris_gallopavo
ENSORLG00020002214	SCAF8	74	72.546	ENSMAUG00000009513	Scaf8	93	57.178	Mesocricetus_auratus
ENSORLG00020002214	SCAF8	78	66.706	ENSMICG00000028965	SCAF8	93	55.957	Microcebus_murinus
ENSORLG00020002214	SCAF8	75	71.990	ENSMOCG00000014950	Scaf8	82	71.728	Microtus_ochrogaster
ENSORLG00020002214	SCAF8	98	73.661	ENSMMOG00000002216	SCAF8	99	74.142	Mola_mola
ENSORLG00020002214	SCAF8	77	69.125	ENSMODG00000008301	SCAF8	85	70.000	Monodelphis_domestica
ENSORLG00020002214	SCAF8	100	78.187	ENSMALG00000011584	SCAF8	100	78.187	Monopterus_albus
ENSORLG00020002214	SCAF8	75	71.597	MGP_CAROLIEiJ_G0021016	Scaf8	93	56.579	Mus_caroli
ENSORLG00020002214	SCAF8	75	71.466	ENSMUSG00000046201	Scaf8	93	56.414	Mus_musculus
ENSORLG00020002214	SCAF8	75	72.120	MGP_PahariEiJ_G0023334	Scaf8	93	56.686	Mus_pahari
ENSORLG00020002214	SCAF8	75	69.809	ENSMPUG00000001974	SCAF8	83	69.936	Mustela_putorius_furo
ENSORLG00020002214	SCAF8	78	67.509	ENSMLUG00000029190	SCAF8	86	68.719	Myotis_lucifugus
ENSORLG00020002214	SCAF8	78	68.215	ENSNGAG00000012332	Scaf8	93	56.518	Nannospalax_galili
ENSORLG00020002214	SCAF8	80	77.191	ENSNBRG00000009067	SCAF8	93	78.821	Neolamprologus_brichardi
ENSORLG00020002214	SCAF8	78	67.445	ENSNLEG00000015509	SCAF8	85	67.040	Nomascus_leucogenys
ENSORLG00020002214	SCAF8	54	75.258	ENSOPRG00000018413	-	69	75.258	Ochotona_princeps
ENSORLG00020002214	SCAF8	78	68.804	ENSODEG00000007296	SCAF8	86	68.804	Octodon_degus
ENSORLG00020002214	SCAF8	79	82.918	ENSONIG00000008119	SCAF8	93	82.844	Oreochromis_niloticus
ENSORLG00020002214	SCAF8	77	69.000	ENSOCUG00000026063	SCAF8	85	69.000	Oryctolagus_cuniculus
ENSORLG00020002214	SCAF8	100	98.121	ENSORLG00000017358	SCAF8	100	98.121	Oryzias_latipes
ENSORLG00020002214	SCAF8	100	97.977	ENSORLG00015015779	SCAF8	100	97.977	Oryzias_latipes_hsok
ENSORLG00020002214	SCAF8	100	92.734	ENSOMEG00000015471	SCAF8	100	92.662	Oryzias_melastigma
ENSORLG00020002214	SCAF8	78	64.948	ENSOGAG00000034223	SCAF8	90	54.685	Otolemur_garnettii
ENSORLG00020002214	SCAF8	77	68.696	ENSOARG00000004159	SCAF8	86	68.820	Ovis_aries
ENSORLG00020002214	SCAF8	78	67.788	ENSPPAG00000039826	SCAF8	86	69.051	Pan_paniscus
ENSORLG00020002214	SCAF8	78	69.373	ENSPPRG00000023175	SCAF8	86	69.496	Panthera_pardus
ENSORLG00020002214	SCAF8	77	69.240	ENSPTIG00000014836	SCAF8	85	69.365	Panthera_tigris_altaica
ENSORLG00020002214	SCAF8	78	67.788	ENSPTRG00000018727	SCAF8	86	69.051	Pan_troglodytes
ENSORLG00020002214	SCAF8	78	67.788	ENSPANG00000017489	SCAF8	85	66.338	Papio_anubis
ENSORLG00020002214	SCAF8	78	70.081	ENSPKIG00000021212	SCAF8	89	71.816	Paramormyrops_kingsleyae
ENSORLG00020002214	SCAF8	67	65.113	ENSPSIG00000008614	SCAF8	70	65.263	Pelodiscus_sinensis
ENSORLG00020002214	SCAF8	74	71.751	ENSPEMG00000010531	Scaf8	93	55.960	Peromyscus_maniculatus_bairdii
ENSORLG00020002214	SCAF8	78	69.506	ENSPCIG00000001141	SCAF8	86	70.247	Phascolarctos_cinereus
ENSORLG00020002214	SCAF8	100	75.478	ENSPFOG00000004176	SCAF8	89	88.531	Poecilia_formosa
ENSORLG00020002214	SCAF8	100	75.691	ENSPLAG00000021432	SCAF8	100	76.541	Poecilia_latipinna
ENSORLG00020002214	SCAF8	100	75.408	ENSPMEG00000007591	SCAF8	100	76.187	Poecilia_mexicana
ENSORLG00020002214	SCAF8	100	75.833	ENSPREG00000000652	SCAF8	100	76.329	Poecilia_reticulata
ENSORLG00020002214	SCAF8	78	67.651	ENSPPYG00000017121	SCAF8	86	67.651	Pongo_abelii
ENSORLG00020002214	SCAF8	64	79.766	ENSPCAG00000013044	SCAF8	74	79.933	Procavia_capensis
ENSORLG00020002214	SCAF8	78	66.941	ENSPCOG00000002067	SCAF8	87	66.786	Propithecus_coquereli
ENSORLG00020002214	SCAF8	78	68.927	ENSPVAG00000005582	SCAF8	87	69.051	Pteropus_vampyrus
ENSORLG00020002214	SCAF8	100	78.890	ENSPNYG00000007277	SCAF8	100	78.602	Pundamilia_nyererei
ENSORLG00020002214	SCAF8	81	70.077	ENSPNAG00000024740	SCAF8	81	72.288	Pygocentrus_nattereri
ENSORLG00020002214	SCAF8	75	71.859	ENSRNOG00000016919	Scaf8	93	56.543	Rattus_norvegicus
ENSORLG00020002214	SCAF8	77	68.789	ENSRBIG00000035769	SCAF8	86	68.927	Rhinopithecus_bieti
ENSORLG00020002214	SCAF8	77	68.789	ENSRROG00000013580	SCAF8	86	68.927	Rhinopithecus_roxellana
ENSORLG00020002214	SCAF8	78	69.051	ENSSBOG00000027023	SCAF8	86	69.051	Saimiri_boliviensis_boliviensis
ENSORLG00020002214	SCAF8	78	68.642	ENSSHAG00000009915	SCAF8	86	70.037	Sarcophilus_harrisii
ENSORLG00020002214	SCAF8	78	63.802	ENSSFOG00015009481	SCAF8	86	78.667	Scleropages_formosus
ENSORLG00020002214	SCAF8	77	83.715	ENSSMAG00000008275	SCAF8	100	76.422	Scophthalmus_maximus
ENSORLG00020002214	SCAF8	75	72.382	ENSSPUG00000015219	SCAF8	79	71.990	Sphenodon_punctatus
ENSORLG00020002214	SCAF8	78	66.978	ENSSSCG00000004070	SCAF8	88	67.292	Sus_scrofa
ENSORLG00020002214	SCAF8	75	71.126	ENSTGUG00000011151	SCAF8	93	66.429	Taeniopygia_guttata
ENSORLG00020002214	SCAF8	100	73.352	ENSTRUG00000009243	SCAF8	100	73.314	Takifugu_rubripes
ENSORLG00020002214	SCAF8	78	78.597	ENSTNIG00000016885	SCAF8	99	78.408	Tetraodon_nigroviridis
ENSORLG00020002214	SCAF8	77	66.262	ENSTTRG00000014538	SCAF8	87	66.869	Tursiops_truncatus
ENSORLG00020002214	SCAF8	78	69.335	ENSUAMG00000024736	SCAF8	85	69.327	Ursus_americanus
ENSORLG00020002214	SCAF8	76	68.869	ENSUMAG00000013404	SCAF8	85	68.996	Ursus_maritimus
ENSORLG00020002214	SCAF8	59	58.583	ENSVPAG00000012465	SCAF8	96	60.917	Vicugna_pacos
ENSORLG00020002214	SCAF8	78	68.765	ENSVVUG00000007532	SCAF8	86	68.957	Vulpes_vulpes
ENSORLG00020002214	SCAF8	71	69.942	ENSXETG00000013132	scaf8	77	69.957	Xenopus_tropicalis
ENSORLG00020002214	SCAF8	100	76.028	ENSXMAG00000019192	SCAF8	100	76.295	Xiphophorus_maculatus