EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020002225 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 25568 bases
Position: chr24:14471906-14497473
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020001515	AKAP7_NLS	PF10469.9	3.8e-46	1	1
ENSORLP00020001527	AKAP7_NLS	PF10469.9	4.1e-46	1	1
ENSORLP00020001507	AKAP7_NLS	PF10469.9	5.9e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020012899	-	6181	-	ENSORLP00020001515	420 (aa)	-	-
ENSORLT00020012876	-	6217	-	ENSORLP00020001527	432 (aa)	-	-
ENSORLT00020012909	-	6107	-	ENSORLP00020001507	501 (aa)	-	-

Gene Model

Click here to download ENSORLG00020002225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020002225's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020002225	-	64	65.809	ENSAPOG00000014954	-	88	66.667	Acanthochromis_polyacanthus
ENSORLG00020002225	-	64	65.809	ENSAPOG00000009532	-	88	66.667	Acanthochromis_polyacanthus
ENSORLG00020002225	-	74	74.522	ENSAPOG00000016315	-	99	71.067	Acanthochromis_polyacanthus
ENSORLG00020002225	-	66	80.783	ENSACIG00000015596	-	98	81.495	Amphilophus_citrinellus
ENSORLG00020002225	-	91	73.575	ENSAOCG00000011837	-	100	63.548	Amphiprion_ocellaris
ENSORLG00020002225	-	100	64.453	ENSAPEG00000018569	-	100	65.820	Amphiprion_percula
ENSORLG00020002225	-	100	70.139	ENSATEG00000002389	-	100	63.846	Anabas_testudineus
ENSORLG00020002225	-	96	72.960	ENSACLG00000007716	-	100	73.455	Astatotilapia_calliptera
ENSORLG00020002225	-	52	32.258	ENSCING00000018486	-	83	32.500	Ciona_intestinalis
ENSORLG00020002225	-	100	70.776	ENSFHEG00000000779	-	100	70.548	Fundulus_heteroclitus
ENSORLG00020002225	-	55	60.084	ENSGMOG00000011815	-	100	59.447	Gadus_morhua
ENSORLG00020002225	-	100	70.615	ENSGAFG00000005596	-	100	65.966	Gambusia_affinis
ENSORLG00020002225	-	60	58.687	ENSGACG00000013213	-	100	55.642	Gasterosteus_aculeatus
ENSORLG00020002225	-	100	71.492	ENSHBUG00000023381	-	100	67.304	Haplochromis_burtoni
ENSORLG00020002225	-	72	70.192	ENSHCOG00000012429	-	69	70.261	Hippocampus_comes
ENSORLG00020002225	-	100	70.737	ENSKMAG00000018397	-	100	65.692	Kryptolebias_marmoratus
ENSORLG00020002225	-	90	74.352	ENSLBEG00000008075	-	100	68.539	Labrus_bergylta
ENSORLG00020002225	-	56	75.745	ENSLBEG00000001397	-	88	75.745	Labrus_bergylta
ENSORLG00020002225	-	96	72.662	ENSMAMG00000014915	-	92	79.943	Mastacembelus_armatus
ENSORLG00020002225	-	95	74.101	ENSMZEG00005012494	-	100	66.603	Maylandia_zebra
ENSORLG00020002225	-	56	77.406	ENSMMOG00000015178	-	79	78.378	Mola_mola
ENSORLG00020002225	-	83	71.233	ENSNBRG00000022718	-	96	81.029	Neolamprologus_brichardi
ENSORLG00020002225	-	56	82.845	ENSONIG00000000680	-	95	82.845	Oreochromis_niloticus
ENSORLG00020002225	-	100	98.843	ENSORLG00000027151	-	100	98.843	Oryzias_latipes
ENSORLG00020002225	-	100	97.685	ENSORLG00015020665	-	100	97.619	Oryzias_latipes_hsok
ENSORLG00020002225	-	100	88.863	ENSOMEG00000019174	-	100	82.806	Oryzias_melastigma
ENSORLG00020002225	-	52	62.727	ENSPMGG00000001295	-	87	61.947	Periophthalmus_magnuspinnatus
ENSORLG00020002225	-	100	70.843	ENSPFOG00000010538	-	95	82.412	Poecilia_formosa
ENSORLG00020002225	-	100	65.753	ENSPLAG00000001022	-	100	65.362	Poecilia_latipinna
ENSORLG00020002225	-	100	70.843	ENSPMEG00000006595	-	100	66.539	Poecilia_mexicana
ENSORLG00020002225	-	100	70.732	ENSPREG00000012679	-	100	70.387	Poecilia_reticulata
ENSORLG00020002225	-	100	71.047	ENSPNYG00000003981	-	100	66.922	Pundamilia_nyererei
ENSORLG00020002225	-	100	61.059	ENSSMAG00000008633	-	100	70.000	Scophthalmus_maximus
ENSORLG00020002225	-	99	71.529	ENSSDUG00000010936	-	99	64.118	Seriola_dumerili
ENSORLG00020002225	-	99	71.765	ENSSLDG00000025505	-	99	71.934	Seriola_lalandi_dorsalis
ENSORLG00020002225	-	74	80.892	ENSSPAG00000007087	-	100	63.566	Stegastes_partitus
ENSORLG00020002225	-	96	60.741	ENSTRUG00000014580	-	79	72.355	Takifugu_rubripes
ENSORLG00020002225	-	72	75.490	ENSTNIG00000010946	-	90	76.109	Tetraodon_nigroviridis
ENSORLG00020002225	-	63	39.850	ENSXETG00000008240	akap7	59	39.098	Xenopus_tropicalis
ENSORLG00020002225	-	50	54.545	ENSXCOG00000007607	-	74	56.500	Xiphophorus_couchianus
ENSORLG00020002225	-	100	69.932	ENSXMAG00000022180	-	100	65.583	Xiphophorus_maculatus