EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020002250 (Gene tree)
Gene ID: -
Gene Symbol: tfb1m
Alias: -
Full Name: transcription factor B1%2C mitochondrial
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 33146 bases
Position: chr22:15548527-15581672
Accession: ZDB-GENE-060929-1010
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020001547	RrnaAD	PF00398.20	1.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020012845	-	1160	-	ENSORLP00020001547	343 (aa)	-	-

Gene Model

Click here to download ENSORLG00020002250's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020002250's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020002250	tfb1m	99	68.328	ENSG00000029639	TFB1M	99	68.328	Homo_sapiens
ENSORLG00020002250	tfb1m	99	83.284	ENSAPOG00000015493	tfb1m	96	83.284	Acanthochromis_polyacanthus
ENSORLG00020002250	tfb1m	99	66.082	ENSAMEG00000012761	TFB1M	98	66.082	Ailuropoda_melanoleuca
ENSORLG00020002250	tfb1m	99	84.320	ENSACIG00000014290	tfb1m	96	84.320	Amphilophus_citrinellus
ENSORLG00020002250	tfb1m	99	84.164	ENSAOCG00000004027	tfb1m	96	84.164	Amphiprion_ocellaris
ENSORLG00020002250	tfb1m	99	84.751	ENSAPEG00000020359	tfb1m	96	84.751	Amphiprion_percula
ENSORLG00020002250	tfb1m	99	82.405	ENSATEG00000006826	tfb1m	97	82.405	Anabas_testudineus
ENSORLG00020002250	tfb1m	96	71.212	ENSAPLG00000006328	TFB1M	95	71.212	Anas_platyrhynchos
ENSORLG00020002250	tfb1m	51	30.682	ENSACAG00000008504	DIMT1	58	30.682	Anolis_carolinensis
ENSORLG00020002250	tfb1m	98	70.448	ENSACAG00000005244	TFB1M	97	70.448	Anolis_carolinensis
ENSORLG00020002250	tfb1m	96	70.517	ENSANAG00000021469	TFB1M	96	70.303	Aotus_nancymaae
ENSORLG00020002250	tfb1m	99	87.278	ENSACLG00000018734	tfb1m	94	87.278	Astatotilapia_calliptera
ENSORLG00020002250	tfb1m	96	80.909	ENSAMXG00000036128	tfb1m	90	80.909	Astyanax_mexicanus
ENSORLG00020002250	tfb1m	95	71.865	ENSBTAG00000031895	TFB1M	98	75.676	Bos_taurus
ENSORLG00020002250	tfb1m	58	30.500	WBGene00008455	E02H1.1	57	30.500	Caenorhabditis_elegans
ENSORLG00020002250	tfb1m	93	44.444	WBGene00020189	tfbm-1	88	44.444	Caenorhabditis_elegans
ENSORLG00020002250	tfb1m	96	70.303	ENSCJAG00000012540	TFB1M	96	70.303	Callithrix_jacchus
ENSORLG00020002250	tfb1m	95	70.948	ENSCAFG00000000581	TFB1M	95	70.948	Canis_familiaris
ENSORLG00020002250	tfb1m	95	70.948	ENSCAFG00020015224	TFB1M	95	70.948	Canis_lupus_dingo
ENSORLG00020002250	tfb1m	95	71.560	ENSCHIG00000017013	TFB1M	98	71.560	Capra_hircus
ENSORLG00020002250	tfb1m	95	71.865	ENSTSYG00000012298	TFB1M	95	71.865	Carlito_syrichta
ENSORLG00020002250	tfb1m	69	50.638	ENSCAPG00000013843	TFB1M	78	50.638	Cavia_aperea
ENSORLG00020002250	tfb1m	96	69.394	ENSCPOG00000030422	TFB1M	95	69.394	Cavia_porcellus
ENSORLG00020002250	tfb1m	96	70.303	ENSCCAG00000015250	TFB1M	96	70.303	Cebus_capucinus
ENSORLG00020002250	tfb1m	97	48.943	ENSCATG00000009009	TFB1M	95	48.640	Cercocebus_atys
ENSORLG00020002250	tfb1m	96	70.000	ENSCLAG00000004500	TFB1M	96	70.000	Chinchilla_lanigera
ENSORLG00020002250	tfb1m	94	70.279	ENSCSAG00000013259	TFB1M	99	67.836	Chlorocebus_sabaeus
ENSORLG00020002250	tfb1m	54	30.319	ENSCHOG00000007922	DIMT1	55	30.319	Choloepus_hoffmanni
ENSORLG00020002250	tfb1m	95	70.122	ENSCHOG00000011245	TFB1M	95	70.122	Choloepus_hoffmanni
ENSORLG00020002250	tfb1m	94	74.074	ENSCPBG00000016320	TFB1M	95	74.074	Chrysemys_picta_bellii
ENSORLG00020002250	tfb1m	89	46.254	ENSCING00000003901	-	80	46.254	Ciona_intestinalis
ENSORLG00020002250	tfb1m	89	47.883	ENSCSAVG00000004721	-	80	47.883	Ciona_savignyi
ENSORLG00020002250	tfb1m	96	70.909	ENSCANG00000029768	TFB1M	98	70.909	Colobus_angolensis_palliatus
ENSORLG00020002250	tfb1m	96	68.788	ENSCGRG00001022866	Tfb1m	96	68.788	Cricetulus_griseus_chok1gshd
ENSORLG00020002250	tfb1m	92	69.524	ENSCGRG00000018084	Tfb1m	96	69.524	Cricetulus_griseus_crigri
ENSORLG00020002250	tfb1m	96	84.195	ENSCSEG00000000131	tfb1m	93	84.195	Cynoglossus_semilaevis
ENSORLG00020002250	tfb1m	99	83.871	ENSCVAG00000009201	tfb1m	97	83.871	Cyprinodon_variegatus
ENSORLG00020002250	tfb1m	96	75.988	ENSDARG00000040727	tfb1m	98	80.682	Danio_rerio
ENSORLG00020002250	tfb1m	82	62.057	ENSDNOG00000032672	-	98	62.057	Dasypus_novemcinctus
ENSORLG00020002250	tfb1m	99	68.786	ENSDNOG00000015984	-	95	68.786	Dasypus_novemcinctus
ENSORLG00020002250	tfb1m	97	69.670	ENSDORG00000012938	Tfb1m	96	69.670	Dipodomys_ordii
ENSORLG00020002250	tfb1m	92	48.438	FBgn0261381	mtTFB1	95	48.438	Drosophila_melanogaster
ENSORLG00020002250	tfb1m	95	49.695	ENSETEG00000005709	TFB1M	94	49.695	Echinops_telfairi
ENSORLG00020002250	tfb1m	93	55.799	ENSEBUG00000010530	tfb1m	92	55.763	Eptatretus_burgeri
ENSORLG00020002250	tfb1m	95	71.865	ENSEASG00005018887	TFB1M	94	71.865	Equus_asinus_asinus
ENSORLG00020002250	tfb1m	95	72.171	ENSECAG00000020997	TFB1M	94	72.171	Equus_caballus
ENSORLG00020002250	tfb1m	95	71.560	ENSEEUG00000014899	TFB1M	97	71.560	Erinaceus_europaeus
ENSORLG00020002250	tfb1m	97	81.024	ENSELUG00000002752	tfb1m	84	81.024	Esox_lucius
ENSORLG00020002250	tfb1m	95	70.336	ENSFCAG00000038785	TFB1M	95	70.336	Felis_catus
ENSORLG00020002250	tfb1m	97	69.486	ENSFALG00000012500	TFB1M	95	69.486	Ficedula_albicollis
ENSORLG00020002250	tfb1m	93	71.875	ENSFDAG00000016985	TFB1M	95	70.988	Fukomys_damarensis
ENSORLG00020002250	tfb1m	99	83.871	ENSFHEG00000008407	tfb1m	97	83.871	Fundulus_heteroclitus
ENSORLG00020002250	tfb1m	97	83.686	ENSGMOG00000018738	tfb1m	95	83.686	Gadus_morhua
ENSORLG00020002250	tfb1m	58	30.198	ENSGMOG00000010801	dimt1l	58	30.198	Gadus_morhua
ENSORLG00020002250	tfb1m	95	71.472	ENSGALG00000013647	TFB1M	93	71.472	Gallus_gallus
ENSORLG00020002250	tfb1m	99	83.578	ENSGAFG00000017997	tfb1m	97	83.578	Gambusia_affinis
ENSORLG00020002250	tfb1m	100	82.216	ENSGACG00000006884	tfb1m	97	82.216	Gasterosteus_aculeatus
ENSORLG00020002250	tfb1m	96	72.424	ENSGAGG00000025345	TFB1M	96	72.424	Gopherus_agassizii
ENSORLG00020002250	tfb1m	99	68.328	ENSGGOG00000012189	TFB1M	99	68.328	Gorilla_gorilla
ENSORLG00020002250	tfb1m	99	86.982	ENSHBUG00000019396	tfb1m	94	86.982	Haplochromis_burtoni
ENSORLG00020002250	tfb1m	96	71.818	ENSHGLG00000002028	TFB1M	95	71.818	Heterocephalus_glaber_female
ENSORLG00020002250	tfb1m	96	71.818	ENSHGLG00100001412	TFB1M	95	71.818	Heterocephalus_glaber_male
ENSORLG00020002250	tfb1m	58	30.198	ENSHCOG00000015252	dimt1l	62	30.198	Hippocampus_comes
ENSORLG00020002250	tfb1m	97	82.779	ENSHCOG00000014135	tfb1m	95	82.779	Hippocampus_comes
ENSORLG00020002250	tfb1m	96	76.970	ENSIPUG00000010964	tfb1m	97	76.970	Ictalurus_punctatus
ENSORLG00020002250	tfb1m	96	70.606	ENSSTOG00000026264	TFB1M	96	70.606	Ictidomys_tridecemlineatus
ENSORLG00020002250	tfb1m	96	70.909	ENSJJAG00000022171	Tfb1m	93	70.909	Jaculus_jaculus
ENSORLG00020002250	tfb1m	99	82.405	ENSKMAG00000012667	tfb1m	98	82.405	Kryptolebias_marmoratus
ENSORLG00020002250	tfb1m	58	30.049	ENSLBEG00000015328	dimt1l	58	30.049	Labrus_bergylta
ENSORLG00020002250	tfb1m	97	85.801	ENSLBEG00000011505	tfb1m	93	85.801	Labrus_bergylta
ENSORLG00020002250	tfb1m	96	75.152	ENSLACG00000012594	TFB1M	94	75.152	Latimeria_chalumnae
ENSORLG00020002250	tfb1m	96	71.856	ENSLOCG00000016850	tfb1m	95	71.856	Lepisosteus_oculatus
ENSORLG00020002250	tfb1m	58	30.049	ENSLOCG00000007837	dimt1l	58	30.049	Lepisosteus_oculatus
ENSORLG00020002250	tfb1m	95	71.472	ENSLAFG00000014035	-	95	71.254	Loxodonta_africana
ENSORLG00020002250	tfb1m	94	59.317	ENSLAFG00000032309	-	100	59.317	Loxodonta_africana
ENSORLG00020002250	tfb1m	97	70.695	ENSMFAG00000031968	TFB1M	96	70.695	Macaca_fascicularis
ENSORLG00020002250	tfb1m	97	70.393	ENSMMUG00000011171	TFB1M	96	70.393	Macaca_mulatta
ENSORLG00020002250	tfb1m	97	70.393	ENSMNEG00000042278	TFB1M	96	70.393	Macaca_nemestrina
ENSORLG00020002250	tfb1m	96	70.909	ENSMLEG00000000044	TFB1M	96	70.909	Mandrillus_leucophaeus
ENSORLG00020002250	tfb1m	99	82.111	ENSMAMG00000009423	tfb1m	96	82.111	Mastacembelus_armatus
ENSORLG00020002250	tfb1m	99	87.278	ENSMZEG00005005640	tfb1m	90	87.278	Maylandia_zebra
ENSORLG00020002250	tfb1m	77	78.409	ENSMGAG00000012779	TFB1M	100	78.113	Meleagris_gallopavo
ENSORLG00020002250	tfb1m	96	71.212	ENSMAUG00000006705	Tfb1m	96	71.212	Mesocricetus_auratus
ENSORLG00020002250	tfb1m	97	71.171	ENSMICG00000045849	TFB1M	97	71.171	Microcebus_murinus
ENSORLG00020002250	tfb1m	95	71.472	ENSMOCG00000013879	Tfb1m	98	69.822	Microtus_ochrogaster
ENSORLG00020002250	tfb1m	58	30.049	ENSMMOG00000018241	dimt1l	58	30.049	Mola_mola
ENSORLG00020002250	tfb1m	97	86.446	ENSMMOG00000002203	tfb1m	93	86.446	Mola_mola
ENSORLG00020002250	tfb1m	95	71.166	ENSMODG00000008169	TFB1M	96	70.303	Monodelphis_domestica
ENSORLG00020002250	tfb1m	97	83.735	ENSMALG00000011657	tfb1m	88	83.735	Monopterus_albus
ENSORLG00020002250	tfb1m	96	69.091	MGP_CAROLIEiJ_G0021018	Tfb1m	96	69.091	Mus_caroli
ENSORLG00020002250	tfb1m	96	69.091	ENSMUSG00000036983	Tfb1m	96	69.091	Mus_musculus
ENSORLG00020002250	tfb1m	95	70.859	MGP_PahariEiJ_G0023336	Tfb1m	96	70.000	Mus_pahari
ENSORLG00020002250	tfb1m	96	69.091	MGP_SPRETEiJ_G0021923	Tfb1m	96	69.091	Mus_spretus
ENSORLG00020002250	tfb1m	95	70.031	ENSMPUG00000002073	TFB1M	95	70.031	Mustela_putorius_furo
ENSORLG00020002250	tfb1m	95	71.254	ENSMLUG00000011329	TFB1M	95	71.254	Myotis_lucifugus
ENSORLG00020002250	tfb1m	96	69.394	ENSNGAG00000015154	Tfb1m	93	69.394	Nannospalax_galili
ENSORLG00020002250	tfb1m	99	86.982	ENSNBRG00000009004	tfb1m	94	86.982	Neolamprologus_brichardi
ENSORLG00020002250	tfb1m	99	68.328	ENSNLEG00000034352	TFB1M	99	68.328	Nomascus_leucogenys
ENSORLG00020002250	tfb1m	95	58.410	ENSMEUG00000001699	-	94	58.410	Notamacropus_eugenii
ENSORLG00020002250	tfb1m	95	53.823	ENSOPRG00000008921	TFB1M	96	53.823	Ochotona_princeps
ENSORLG00020002250	tfb1m	94	69.969	ENSODEG00000005915	TFB1M	94	69.969	Octodon_degus
ENSORLG00020002250	tfb1m	99	86.982	ENSONIG00000008109	tfb1m	98	86.982	Oreochromis_niloticus
ENSORLG00020002250	tfb1m	95	70.336	ENSOCUG00000012154	TFB1M	96	70.336	Oryctolagus_cuniculus
ENSORLG00020002250	tfb1m	100	98.542	ENSORLG00000017328	tfb1m	83	98.542	Oryzias_latipes
ENSORLG00020002250	tfb1m	100	97.959	ENSORLG00015016067	tfb1m	100	97.959	Oryzias_latipes_hsok
ENSORLG00020002250	tfb1m	99	92.082	ENSOMEG00000015641	tfb1m	97	92.082	Oryzias_melastigma
ENSORLG00020002250	tfb1m	97	68.862	ENSOGAG00000011681	TFB1M	97	68.862	Otolemur_garnettii
ENSORLG00020002250	tfb1m	95	69.970	ENSOARG00000004216	TFB1M	98	69.970	Ovis_aries
ENSORLG00020002250	tfb1m	96	70.000	ENSPPAG00000030834	TFB1M	95	70.000	Pan_paniscus
ENSORLG00020002250	tfb1m	95	70.031	ENSPPRG00000013578	TFB1M	95	70.031	Panthera_pardus
ENSORLG00020002250	tfb1m	95	70.031	ENSPTIG00000003540	TFB1M	95	70.031	Panthera_tigris_altaica
ENSORLG00020002250	tfb1m	99	68.035	ENSPTRG00000018730	TFB1M	99	68.035	Pan_troglodytes
ENSORLG00020002250	tfb1m	97	70.695	ENSPANG00000007489	TFB1M	96	70.695	Papio_anubis
ENSORLG00020002250	tfb1m	95	78.287	ENSPKIG00000021117	tfb1m	93	78.287	Paramormyrops_kingsleyae
ENSORLG00020002250	tfb1m	58	30.198	ENSPKIG00000017870	dimt1l	58	30.198	Paramormyrops_kingsleyae
ENSORLG00020002250	tfb1m	96	72.121	ENSPSIG00000006643	TFB1M	96	72.121	Pelodiscus_sinensis
ENSORLG00020002250	tfb1m	95	84.709	ENSPMGG00000011289	tfb1m	94	84.709	Periophthalmus_magnuspinnatus
ENSORLG00020002250	tfb1m	96	69.697	ENSPEMG00000010410	Tfb1m	96	69.697	Peromyscus_maniculatus_bairdii
ENSORLG00020002250	tfb1m	57	63.452	ENSPMAG00000008056	tfb1m	90	63.184	Petromyzon_marinus
ENSORLG00020002250	tfb1m	97	70.091	ENSPCIG00000001010	TFB1M	92	70.091	Phascolarctos_cinereus
ENSORLG00020002250	tfb1m	99	82.507	ENSPFOG00000005139	tfb1m	97	82.507	Poecilia_formosa
ENSORLG00020002250	tfb1m	99	83.235	ENSPLAG00000021410	tfb1m	97	83.235	Poecilia_latipinna
ENSORLG00020002250	tfb1m	99	82.698	ENSPMEG00000020166	tfb1m	97	82.698	Poecilia_mexicana
ENSORLG00020002250	tfb1m	99	82.405	ENSPREG00000022392	tfb1m	97	82.405	Poecilia_reticulata
ENSORLG00020002250	tfb1m	99	66.374	ENSPPYG00000017123	TFB1M	99	66.374	Pongo_abelii
ENSORLG00020002250	tfb1m	85	56.997	ENSPCAG00000007078	TFB1M	98	56.997	Procavia_capensis
ENSORLG00020002250	tfb1m	95	71.865	ENSPCOG00000028453	TFB1M	95	71.865	Propithecus_coquereli
ENSORLG00020002250	tfb1m	95	72.171	ENSPVAG00000015818	TFB1M	95	72.171	Pteropus_vampyrus
ENSORLG00020002250	tfb1m	99	86.982	ENSPNYG00000007330	tfb1m	94	86.982	Pundamilia_nyererei
ENSORLG00020002250	tfb1m	95	79.817	ENSPNAG00000007507	tfb1m	93	79.817	Pygocentrus_nattereri
ENSORLG00020002250	tfb1m	96	70.000	ENSRNOG00000056223	Tfb1m	96	70.000	Rattus_norvegicus
ENSORLG00020002250	tfb1m	96	71.212	ENSRBIG00000039975	TFB1M	98	71.212	Rhinopithecus_bieti
ENSORLG00020002250	tfb1m	96	70.909	ENSRROG00000033802	TFB1M	98	70.909	Rhinopithecus_roxellana
ENSORLG00020002250	tfb1m	96	70.606	ENSSBOG00000008663	TFB1M	96	70.606	Saimiri_boliviensis_boliviensis
ENSORLG00020002250	tfb1m	93	63.208	ENSSHAG00000013259	TFB1M	92	63.208	Sarcophilus_harrisii
ENSORLG00020002250	tfb1m	98	76.558	ENSSFOG00015009739	tfb1m	96	76.558	Scleropages_formosus
ENSORLG00020002250	tfb1m	99	83.871	ENSSMAG00000008229	tfb1m	97	83.871	Scophthalmus_maximus
ENSORLG00020002250	tfb1m	58	30.049	ENSSMAG00000010122	dimt1l	58	30.049	Scophthalmus_maximus
ENSORLG00020002250	tfb1m	99	83.284	ENSSDUG00000011871	tfb1m	96	83.284	Seriola_dumerili
ENSORLG00020002250	tfb1m	99	82.991	ENSSLDG00000023923	tfb1m	96	82.991	Seriola_lalandi_dorsalis
ENSORLG00020002250	tfb1m	65	74.324	ENSSARG00000003159	TFB1M	100	74.324	Sorex_araneus
ENSORLG00020002250	tfb1m	99	68.235	ENSSPUG00000015253	TFB1M	99	68.235	Sphenodon_punctatus
ENSORLG00020002250	tfb1m	58	30.198	ENSSPAG00000021538	dimt1l	58	30.198	Stegastes_partitus
ENSORLG00020002250	tfb1m	97	88.253	ENSSPAG00000019515	tfb1m	93	88.253	Stegastes_partitus
ENSORLG00020002250	tfb1m	95	71.865	ENSSSCG00000024361	TFB1M	96	71.865	Sus_scrofa
ENSORLG00020002250	tfb1m	97	70.091	ENSTGUG00000011136	TFB1M	96	70.091	Taeniopygia_guttata
ENSORLG00020002250	tfb1m	58	30.198	ENSTRUG00000008885	dimt1l	58	30.198	Takifugu_rubripes
ENSORLG00020002250	tfb1m	97	86.145	ENSTRUG00000020334	tfb1m	93	86.145	Takifugu_rubripes
ENSORLG00020002250	tfb1m	64	86.364	ENSTNIG00000016882	tfb1m	97	86.364	Tetraodon_nigroviridis
ENSORLG00020002250	tfb1m	97	69.069	ENSTBEG00000008769	TFB1M	98	67.941	Tupaia_belangeri
ENSORLG00020002250	tfb1m	95	71.865	ENSTTRG00000006327	TFB1M	97	71.865	Tursiops_truncatus
ENSORLG00020002250	tfb1m	95	68.405	ENSUAMG00000017802	TFB1M	97	66.082	Ursus_americanus
ENSORLG00020002250	tfb1m	99	66.667	ENSUMAG00000013377	TFB1M	89	66.667	Ursus_maritimus
ENSORLG00020002250	tfb1m	97	70.181	ENSVPAG00000010148	TFB1M	98	70.181	Vicugna_pacos
ENSORLG00020002250	tfb1m	95	70.336	ENSVVUG00000007643	TFB1M	96	70.336	Vulpes_vulpes
ENSORLG00020002250	tfb1m	97	73.716	ENSXETG00000007852	tfb1m	96	73.716	Xenopus_tropicalis
ENSORLG00020002250	tfb1m	99	83.578	ENSXCOG00000013230	tfb1m	97	83.578	Xiphophorus_couchianus
ENSORLG00020002250	tfb1m	99	83.871	ENSXMAG00000019222	tfb1m	97	83.871	Xiphophorus_maculatus