EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020002355 (Gene tree)
Gene ID: -
Gene Symbol: rrp12
Alias: -
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 17049 bases
Position: chr15:21935348-21952396
Accession: ZDB-GENE-050706-182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020001642	NUC173	PF08161.12	1.4e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020012683	-	4690	-	ENSORLP00020001642	1256 (aa)	-	-

Gene Model

Click here to download ENSORLG00020002355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020002355's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020002355	rrp12	99	64.167	ENSG00000052749	RRP12	100	76.562	Homo_sapiens
ENSORLG00020002355	rrp12	99	85.012	ENSAPOG00000013355	rrp12	97	85.012	Acanthochromis_polyacanthus
ENSORLG00020002355	rrp12	99	63.987	ENSAMEG00000000134	RRP12	97	64.066	Ailuropoda_melanoleuca
ENSORLG00020002355	rrp12	99	86.704	ENSACIG00000022673	rrp12	97	86.704	Amphilophus_citrinellus
ENSORLG00020002355	rrp12	99	87.749	ENSAOCG00000016149	rrp12	97	87.828	Amphiprion_ocellaris
ENSORLG00020002355	rrp12	99	86.360	ENSAPEG00000016023	rrp12	97	86.439	Amphiprion_percula
ENSORLG00020002355	rrp12	99	85.862	ENSATEG00000022627	rrp12	97	85.862	Anabas_testudineus
ENSORLG00020002355	rrp12	96	60.556	ENSAPLG00000014387	RRP12	97	60.916	Anas_platyrhynchos
ENSORLG00020002355	rrp12	99	59.747	ENSACAG00000002175	RRP12	97	59.716	Anolis_carolinensis
ENSORLG00020002355	rrp12	92	73.684	ENSANAG00000037485	RRP12	97	73.684	Aotus_nancymaae
ENSORLG00020002355	rrp12	99	86.237	ENSACLG00000007354	rrp12	97	86.237	Astatotilapia_calliptera
ENSORLG00020002355	rrp12	99	74.622	ENSAMXG00000012852	rrp12	98	74.702	Astyanax_mexicanus
ENSORLG00020002355	rrp12	99	63.062	ENSBTAG00000002191	RRP12	97	63.170	Bos_taurus
ENSORLG00020002355	rrp12	85	61.998	ENSCJAG00000016549	-	97	62.034	Callithrix_jacchus
ENSORLG00020002355	rrp12	99	63.887	ENSCAFG00000009043	RRP12	97	63.830	Canis_familiaris
ENSORLG00020002355	rrp12	99	63.887	ENSCAFG00020005991	RRP12	97	63.830	Canis_lupus_dingo
ENSORLG00020002355	rrp12	99	61.337	ENSCHIG00000011876	RRP12	96	61.644	Capra_hircus
ENSORLG00020002355	rrp12	52	55.172	ENSTSYG00000030210	-	95	56.241	Carlito_syrichta
ENSORLG00020002355	rrp12	96	57.424	ENSCAPG00000008991	RRP12	95	57.354	Cavia_aperea
ENSORLG00020002355	rrp12	99	63.133	ENSCPOG00000004215	RRP12	97	62.995	Cavia_porcellus
ENSORLG00020002355	rrp12	69	58.683	ENSCCAG00000033123	-	80	58.277	Cebus_capucinus
ENSORLG00020002355	rrp12	79	66.815	ENSCCAG00000024088	RRP12	96	68.951	Cebus_capucinus
ENSORLG00020002355	rrp12	99	59.669	ENSCATG00000045310	RRP12	97	59.779	Cercocebus_atys
ENSORLG00020002355	rrp12	99	62.925	ENSCLAG00000003753	RRP12	97	62.047	Chinchilla_lanigera
ENSORLG00020002355	rrp12	88	62.601	ENSCSAG00000005877	RRP12	97	62.780	Chlorocebus_sabaeus
ENSORLG00020002355	rrp12	53	71.096	ENSCHOG00000003095	-	53	71.048	Choloepus_hoffmanni
ENSORLG00020002355	rrp12	94	64.213	ENSCPBG00000011935	RRP12	95	64.105	Chrysemys_picta_bellii
ENSORLG00020002355	rrp12	63	39.483	ENSCSAVG00000006059	-	96	39.360	Ciona_savignyi
ENSORLG00020002355	rrp12	92	73.684	ENSCANG00000031653	RRP12	97	73.684	Colobus_angolensis_palliatus
ENSORLG00020002355	rrp12	90	63.398	ENSCGRG00001004338	Rrp12	97	63.660	Cricetulus_griseus_chok1gshd
ENSORLG00020002355	rrp12	99	63.004	ENSCGRG00000011965	Rrp12	97	63.241	Cricetulus_griseus_crigri
ENSORLG00020002355	rrp12	99	83.082	ENSCSEG00000007799	rrp12	98	83.320	Cynoglossus_semilaevis
ENSORLG00020002355	rrp12	99	85.760	ENSCVAG00000003418	rrp12	97	86.078	Cyprinodon_variegatus
ENSORLG00020002355	rrp12	99	72.576	ENSDARG00000022410	rrp12	98	72.893	Danio_rerio
ENSORLG00020002355	rrp12	99	62.904	ENSDNOG00000005120	RRP12	97	62.884	Dasypus_novemcinctus
ENSORLG00020002355	rrp12	99	63.486	ENSDORG00000009199	Rrp12	97	64.038	Dipodomys_ordii
ENSORLG00020002355	rrp12	91	67.143	ENSETEG00000002455	RRP12	90	67.143	Echinops_telfairi
ENSORLG00020002355	rrp12	86	55.000	ENSEBUG00000006555	rrp12	95	48.936	Eptatretus_burgeri
ENSORLG00020002355	rrp12	99	63.636	ENSEASG00005008693	RRP12	97	63.981	Equus_asinus_asinus
ENSORLG00020002355	rrp12	98	61.196	ENSECAG00000010892	RRP12	97	63.889	Equus_caballus
ENSORLG00020002355	rrp12	65	58.824	ENSEEUG00000005447	-	64	58.824	Erinaceus_europaeus
ENSORLG00020002355	rrp12	99	77.222	ENSELUG00000010510	rrp12	100	76.969	Esox_lucius
ENSORLG00020002355	rrp12	99	64.038	ENSFCAG00000028639	RRP12	97	64.303	Felis_catus
ENSORLG00020002355	rrp12	94	63.153	ENSFALG00000008458	RRP12	97	63.460	Ficedula_albicollis
ENSORLG00020002355	rrp12	99	63.162	ENSFDAG00000019108	RRP12	93	63.183	Fukomys_damarensis
ENSORLG00020002355	rrp12	99	77.919	ENSFHEG00000004148	rrp12	97	77.919	Fundulus_heteroclitus
ENSORLG00020002355	rrp12	99	70.720	ENSGMOG00000004188	rrp12	96	70.794	Gadus_morhua
ENSORLG00020002355	rrp12	99	63.420	ENSGALG00000041331	RRP12	96	64.280	Gallus_gallus
ENSORLG00020002355	rrp12	99	86.169	ENSGAFG00000009038	rrp12	97	86.248	Gambusia_affinis
ENSORLG00020002355	rrp12	99	82.418	ENSGACG00000007175	rrp12	97	82.418	Gasterosteus_aculeatus
ENSORLG00020002355	rrp12	69	66.283	ENSGAGG00000019169	RRP12	99	63.787	Gopherus_agassizii
ENSORLG00020002355	rrp12	99	64.167	ENSGGOG00000014850	RRP12	97	64.353	Gorilla_gorilla
ENSORLG00020002355	rrp12	99	86.317	ENSHBUG00000023527	rrp12	97	86.317	Haplochromis_burtoni
ENSORLG00020002355	rrp12	99	63.004	ENSHGLG00000016772	RRP12	97	63.262	Heterocephalus_glaber_female
ENSORLG00020002355	rrp12	99	63.004	ENSHGLG00100015110	RRP12	97	63.262	Heterocephalus_glaber_male
ENSORLG00020002355	rrp12	99	79.841	ENSHCOG00000019519	rrp12	97	80.096	Hippocampus_comes
ENSORLG00020002355	rrp12	99	72.973	ENSIPUG00000000311	RRP12	97	73.651	Ictalurus_punctatus
ENSORLG00020002355	rrp12	99	64.032	ENSSTOG00000006515	RRP12	97	63.895	Ictidomys_tridecemlineatus
ENSORLG00020002355	rrp12	96	62.592	ENSJJAG00000000110	Rrp12	96	62.153	Jaculus_jaculus
ENSORLG00020002355	rrp12	99	85.680	ENSKMAG00000020621	rrp12	97	86.078	Kryptolebias_marmoratus
ENSORLG00020002355	rrp12	99	80.971	ENSLBEG00000015335	rrp12	97	80.971	Labrus_bergylta
ENSORLG00020002355	rrp12	74	64.045	ENSLACG00000016633	RRP12	80	64.045	Latimeria_chalumnae
ENSORLG00020002355	rrp12	99	69.340	ENSLOCG00000003846	rrp12	97	69.340	Lepisosteus_oculatus
ENSORLG00020002355	rrp12	99	63.672	ENSLAFG00000015965	RRP12	97	63.357	Loxodonta_africana
ENSORLG00020002355	rrp12	92	73.026	ENSMFAG00000041558	RRP12	97	73.026	Macaca_fascicularis
ENSORLG00020002355	rrp12	92	73.026	ENSMMUG00000019634	RRP12	97	73.026	Macaca_mulatta
ENSORLG00020002355	rrp12	92	73.026	ENSMNEG00000036759	RRP12	97	73.026	Macaca_nemestrina
ENSORLG00020002355	rrp12	92	73.684	ENSMLEG00000041317	RRP12	97	73.684	Mandrillus_leucophaeus
ENSORLG00020002355	rrp12	99	83.280	ENSMAMG00000002964	rrp12	97	85.666	Mastacembelus_armatus
ENSORLG00020002355	rrp12	99	86.317	ENSMZEG00005003241	rrp12	97	86.317	Maylandia_zebra
ENSORLG00020002355	rrp12	99	61.642	ENSMGAG00000009829	RRP12	97	61.714	Meleagris_gallopavo
ENSORLG00020002355	rrp12	95	63.772	ENSMAUG00000020743	Rrp12	95	63.772	Mesocricetus_auratus
ENSORLG00020002355	rrp12	99	64.060	ENSMICG00000007624	RRP12	97	63.551	Microcebus_murinus
ENSORLG00020002355	rrp12	99	64.139	ENSMOCG00000006753	Rrp12	97	64.218	Microtus_ochrogaster
ENSORLG00020002355	rrp12	99	82.578	ENSMMOG00000010708	rrp12	97	82.578	Mola_mola
ENSORLG00020002355	rrp12	99	64.478	ENSMODG00000004315	RRP12	97	64.766	Monodelphis_domestica
ENSORLG00020002355	rrp12	94	84.792	ENSMALG00000016560	rrp12	99	84.648	Monopterus_albus
ENSORLG00020002355	rrp12	99	64.006	MGP_CAROLIEiJ_G0022957	Rrp12	97	63.850	Mus_caroli
ENSORLG00020002355	rrp12	99	64.534	ENSMUSG00000035049	Rrp12	97	64.297	Mus_musculus
ENSORLG00020002355	rrp12	99	64.692	MGP_PahariEiJ_G0014447	Rrp12	97	64.455	Mus_pahari
ENSORLG00020002355	rrp12	99	64.771	MGP_SPRETEiJ_G0023878	Rrp12	97	64.534	Mus_spretus
ENSORLG00020002355	rrp12	99	63.773	ENSMPUG00000017046	RRP12	97	63.987	Mustela_putorius_furo
ENSORLG00020002355	rrp12	99	64.016	ENSMLUG00000017160	RRP12	97	64.173	Myotis_lucifugus
ENSORLG00020002355	rrp12	99	64.190	ENSNGAG00000024144	Rrp12	97	64.190	Nannospalax_galili
ENSORLG00020002355	rrp12	99	84.407	ENSNBRG00000009987	rrp12	97	84.328	Neolamprologus_brichardi
ENSORLG00020002355	rrp12	99	55.871	ENSNLEG00000013762	RRP12	97	73.684	Nomascus_leucogenys
ENSORLG00020002355	rrp12	99	58.558	ENSMEUG00000003185	RRP12	97	58.954	Notamacropus_eugenii
ENSORLG00020002355	rrp12	94	67.055	ENSOPRG00000005001	RRP12	91	67.055	Ochotona_princeps
ENSORLG00020002355	rrp12	99	62.560	ENSODEG00000016439	RRP12	97	62.291	Octodon_degus
ENSORLG00020002355	rrp12	99	86.476	ENSONIG00000009528	rrp12	97	86.555	Oreochromis_niloticus
ENSORLG00020002355	rrp12	99	60.520	ENSOANG00000006560	RRP12	97	60.520	Ornithorhynchus_anatinus
ENSORLG00020002355	rrp12	99	63.658	ENSOCUG00000005662	RRP12	97	63.658	Oryctolagus_cuniculus
ENSORLG00020002355	rrp12	99	98.725	ENSORLG00000008688	rrp12	99	98.643	Oryzias_latipes
ENSORLG00020002355	rrp12	99	98.725	ENSORLG00015006709	rrp12	97	98.725	Oryzias_latipes_hsok
ENSORLG00020002355	rrp12	100	95.462	ENSOMEG00000002609	rrp12	99	95.462	Oryzias_melastigma
ENSORLG00020002355	rrp12	99	63.071	ENSOGAG00000001626	RRP12	97	62.569	Otolemur_garnettii
ENSORLG00020002355	rrp12	99	62.254	ENSOARG00000009681	RRP12	97	62.156	Ovis_aries
ENSORLG00020002355	rrp12	99	62.539	ENSPPAG00000043885	RRP12	98	62.186	Pan_paniscus
ENSORLG00020002355	rrp12	99	64.038	ENSPPRG00000002029	RRP12	97	64.303	Panthera_pardus
ENSORLG00020002355	rrp12	99	61.259	ENSPTIG00000004428	RRP12	97	61.591	Panthera_tigris_altaica
ENSORLG00020002355	rrp12	99	62.618	ENSPTRG00000002806	RRP12	98	62.264	Pan_troglodytes
ENSORLG00020002355	rrp12	92	73.684	ENSPANG00000021360	RRP12	97	73.684	Papio_anubis
ENSORLG00020002355	rrp12	99	72.447	ENSPKIG00000016516	rrp12	97	72.727	Paramormyrops_kingsleyae
ENSORLG00020002355	rrp12	99	79.825	ENSPMGG00000020217	rrp12	97	80.143	Periophthalmus_magnuspinnatus
ENSORLG00020002355	rrp12	99	64.483	ENSPEMG00000008437	Rrp12	97	64.246	Peromyscus_maniculatus_bairdii
ENSORLG00020002355	rrp12	87	52.397	ENSPMAG00000007493	rrp12	97	46.564	Petromyzon_marinus
ENSORLG00020002355	rrp12	99	64.025	ENSPCIG00000002157	RRP12	98	64.025	Phascolarctos_cinereus
ENSORLG00020002355	rrp12	99	86.248	ENSPFOG00000014975	rrp12	97	86.248	Poecilia_formosa
ENSORLG00020002355	rrp12	99	86.010	ENSPLAG00000009840	rrp12	97	86.010	Poecilia_latipinna
ENSORLG00020002355	rrp12	99	86.248	ENSPMEG00000021871	rrp12	97	86.248	Poecilia_mexicana
ENSORLG00020002355	rrp12	99	83.228	ENSPREG00000020950	rrp12	97	83.228	Poecilia_reticulata
ENSORLG00020002355	rrp12	99	62.983	ENSPPYG00000002528	RRP12	97	63.170	Pongo_abelii
ENSORLG00020002355	rrp12	94	75.706	ENSPCAG00000008967	RRP12	92	75.706	Procavia_capensis
ENSORLG00020002355	rrp12	99	63.701	ENSPCOG00000014009	RRP12	97	63.465	Propithecus_coquereli
ENSORLG00020002355	rrp12	99	61.058	ENSPVAG00000003370	RRP12	98	60.979	Pteropus_vampyrus
ENSORLG00020002355	rrp12	99	86.635	ENSPNYG00000009451	rrp12	97	86.635	Pundamilia_nyererei
ENSORLG00020002355	rrp12	99	74.821	ENSPNAG00000007658	rrp12	97	74.900	Pygocentrus_nattereri
ENSORLG00020002355	rrp12	99	63.636	ENSRNOG00000048495	Rrp12	97	63.050	Rattus_norvegicus
ENSORLG00020002355	rrp12	92	73.684	ENSRBIG00000021296	RRP12	97	73.684	Rhinopithecus_bieti
ENSORLG00020002355	rrp12	92	73.684	ENSRROG00000032482	RRP12	97	73.684	Rhinopithecus_roxellana
ENSORLG00020002355	rrp12	92	73.026	ENSSBOG00000030992	RRP12	98	73.026	Saimiri_boliviensis_boliviensis
ENSORLG00020002355	rrp12	99	63.651	ENSSHAG00000018275	RRP12	97	63.651	Sarcophilus_harrisii
ENSORLG00020002355	rrp12	99	74.980	ENSSFOG00015016400	rrp12	98	74.901	Scleropages_formosus
ENSORLG00020002355	rrp12	99	84.805	ENSSMAG00000004047	rrp12	97	85.203	Scophthalmus_maximus
ENSORLG00020002355	rrp12	99	86.714	ENSSDUG00000022871	rrp12	97	86.714	Seriola_dumerili
ENSORLG00020002355	rrp12	99	86.396	ENSSLDG00000003038	rrp12	97	86.476	Seriola_lalandi_dorsalis
ENSORLG00020002355	rrp12	99	61.362	ENSSPUG00000012221	RRP12	97	61.599	Sphenodon_punctatus
ENSORLG00020002355	rrp12	99	87.828	ENSSPAG00000002261	rrp12	97	88.067	Stegastes_partitus
ENSORLG00020002355	rrp12	99	62.796	ENSSSCG00000010514	RRP12	97	62.954	Sus_scrofa
ENSORLG00020002355	rrp12	88	60.305	ENSTGUG00000009711	RRP12	97	60.663	Taeniopygia_guttata
ENSORLG00020002355	rrp12	99	77.486	ENSTRUG00000012017	rrp12	97	77.566	Takifugu_rubripes
ENSORLG00020002355	rrp12	99	83.214	ENSTNIG00000016522	rrp12	97	83.294	Tetraodon_nigroviridis
ENSORLG00020002355	rrp12	77	75.000	ENSTBEG00000004907	RRP12	77	75.000	Tupaia_belangeri
ENSORLG00020002355	rrp12	99	61.313	ENSTTRG00000009878	RRP12	97	61.313	Tursiops_truncatus
ENSORLG00020002355	rrp12	99	64.094	ENSUAMG00000009092	RRP12	97	64.173	Ursus_americanus
ENSORLG00020002355	rrp12	99	62.411	ENSUMAG00000021621	RRP12	97	62.382	Ursus_maritimus
ENSORLG00020002355	rrp12	99	63.887	ENSVVUG00000023168	RRP12	98	63.830	Vulpes_vulpes
ENSORLG00020002355	rrp12	99	65.506	ENSXETG00000003430	rrp12	98	65.585	Xenopus_tropicalis
ENSORLG00020002355	rrp12	93	84.880	ENSXCOG00000012082	rrp12	97	84.714	Xiphophorus_couchianus
ENSORLG00020002355	rrp12	99	86.010	ENSXMAG00000013498	rrp12	97	86.328	Xiphophorus_maculatus