EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020002554 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 1896 bases
Position: chr21:17195345-17197240
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020022311	RVT_1	PF00078.27	1.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020012361	-	1896	-	ENSORLP00020022311	631 (aa)	-	-

Gene Model

Click here to download ENSORLG00020002554's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020002554's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020002554	-	87	32.394	ENSORLG00020004022	-	50	32.394
ENSORLG00020002554	-	73	35.075	ENSORLG00020000592	-	53	35.075
ENSORLG00020002554	-	94	41.767	ENSORLG00020016001	-	51	41.767
ENSORLG00020002554	-	84	38.424	ENSORLG00020005114	-	50	38.424
ENSORLG00020002554	-	83	38.798	ENSORLG00020013042	-	54	38.798
ENSORLG00020002554	-	61	43.478	ENSORLG00020016695	-	52	43.478
ENSORLG00020002554	-	82	36.170	ENSORLG00020021845	-	54	36.170
ENSORLG00020002554	-	58	37.162	ENSORLG00020009084	-	50	37.162

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020002554	-	99	57.686	ENSAPOG00000008045	-	66	57.686	Acanthochromis_polyacanthus
ENSORLG00020002554	-	99	73.418	ENSAPOG00000012135	-	55	73.418	Acanthochromis_polyacanthus
ENSORLG00020002554	-	99	49.763	ENSACLG00000000367	-	70	49.763	Astatotilapia_calliptera
ENSORLG00020002554	-	99	48.738	ENSACLG00000027730	-	57	48.738	Astatotilapia_calliptera
ENSORLG00020002554	-	77	54.303	ENSACLG00000005569	-	100	54.303	Astatotilapia_calliptera
ENSORLG00020002554	-	88	49.642	ENSACLG00000008862	-	75	49.642	Astatotilapia_calliptera
ENSORLG00020002554	-	92	54.932	ENSACLG00000014439	-	99	54.932	Astatotilapia_calliptera
ENSORLG00020002554	-	99	73.802	ENSACLG00000001563	-	63	73.802	Astatotilapia_calliptera
ENSORLG00020002554	-	90	54.466	ENSACLG00000007343	-	70	54.466	Astatotilapia_calliptera
ENSORLG00020002554	-	99	48.896	ENSACLG00000004062	-	85	48.896	Astatotilapia_calliptera
ENSORLG00020002554	-	99	40.000	ENSACLG00000018181	-	67	40.000	Astatotilapia_calliptera
ENSORLG00020002554	-	99	42.813	ENSAMXG00000043892	-	82	43.578	Astyanax_mexicanus
ENSORLG00020002554	-	77	47.619	ENSAMXG00000037673	-	60	47.619	Astyanax_mexicanus
ENSORLG00020002554	-	72	47.609	ENSCPBG00000003152	-	81	47.609	Chrysemys_picta_bellii
ENSORLG00020002554	-	90	42.419	ENSCPBG00000024252	-	100	42.419	Chrysemys_picta_bellii
ENSORLG00020002554	-	97	41.374	ENSCPBG00000011626	-	74	41.374	Chrysemys_picta_bellii
ENSORLG00020002554	-	84	42.962	ENSCPBG00000001477	-	100	42.962	Chrysemys_picta_bellii
ENSORLG00020002554	-	65	41.995	ENSCPBG00000002218	-	98	41.995	Chrysemys_picta_bellii
ENSORLG00020002554	-	95	38.916	ENSCPBG00000008522	-	97	38.916	Chrysemys_picta_bellii
ENSORLG00020002554	-	91	39.934	ENSCVAG00000009912	-	73	39.934	Cyprinodon_variegatus
ENSORLG00020002554	-	98	39.908	ENSELUG00000000948	-	54	39.908	Esox_lucius
ENSORLG00020002554	-	85	55.204	ENSGAFG00000009062	-	71	55.204	Gambusia_affinis
ENSORLG00020002554	-	68	51.732	ENSGAFG00000012710	-	99	51.732	Gambusia_affinis
ENSORLG00020002554	-	95	42.029	ENSGAGG00000020521	-	73	42.029	Gopherus_agassizii
ENSORLG00020002554	-	99	46.395	ENSGAGG00000014450	-	57	46.395	Gopherus_agassizii
ENSORLG00020002554	-	95	42.029	ENSGAGG00000012039	-	73	42.029	Gopherus_agassizii
ENSORLG00020002554	-	76	42.084	ENSGAGG00000014538	-	90	42.084	Gopherus_agassizii
ENSORLG00020002554	-	99	41.475	ENSGAGG00000025282	-	55	41.475	Gopherus_agassizii
ENSORLG00020002554	-	99	48.025	ENSIPUG00000000601	-	69	47.867	Ictalurus_punctatus
ENSORLG00020002554	-	99	40.244	ENSMAMG00000018393	-	60	40.244	Mastacembelus_armatus
ENSORLG00020002554	-	99	40.429	ENSMZEG00005000633	-	61	40.429	Maylandia_zebra
ENSORLG00020002554	-	50	30.063	ENSMODG00000029631	-	55	30.063	Monodelphis_domestica
ENSORLG00020002554	-	86	54.898	ENSMALG00000019305	-	81	54.898	Monopterus_albus
ENSORLG00020002554	-	90	64.572	ENSORLG00000029791	-	81	64.572	Oryzias_latipes
ENSORLG00020002554	-	99	40.712	ENSORLG00000028632	-	61	40.775	Oryzias_latipes
ENSORLG00020002554	-	99	39.329	ENSORLG00000026676	-	67	39.816	Oryzias_latipes
ENSORLG00020002554	-	86	55.638	ENSORLG00000025478	-	70	55.638	Oryzias_latipes
ENSORLG00020002554	-	98	41.628	ENSOMEG00000006705	-	87	41.628	Oryzias_melastigma
ENSORLG00020002554	-	56	43.478	ENSPKIG00000015325	-	73	43.478	Paramormyrops_kingsleyae
ENSORLG00020002554	-	96	41.325	ENSPKIG00000000391	-	92	41.325	Paramormyrops_kingsleyae
ENSORLG00020002554	-	99	49.123	ENSPSIG00000000353	-	54	49.123	Pelodiscus_sinensis
ENSORLG00020002554	-	88	48.845	ENSPSIG00000013781	-	73	48.845	Pelodiscus_sinensis
ENSORLG00020002554	-	96	49.507	ENSPSIG00000001658	-	69	49.507	Pelodiscus_sinensis
ENSORLG00020002554	-	84	39.531	ENSPMEG00000020606	-	89	39.531	Poecilia_mexicana
ENSORLG00020002554	-	90	56.272	ENSPMEG00000019585	-	72	56.272	Poecilia_mexicana
ENSORLG00020002554	-	99	56.735	ENSPMEG00000016355	-	51	56.735	Poecilia_mexicana
ENSORLG00020002554	-	99	54.631	ENSSDUG00000002460	-	51	54.631	Seriola_dumerili
ENSORLG00020002554	-	83	40.748	ENSTNIG00000001462	-	93	40.748	Tetraodon_nigroviridis
ENSORLG00020002554	-	98	41.745	ENSXMAG00000030089	-	61	41.745	Xiphophorus_maculatus
ENSORLG00020002554	-	77	57.202	ENSXMAG00000025770	-	100	57.202	Xiphophorus_maculatus