EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020002653 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 9765 bases
Position: chr16:936838-946602
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020022399	zf-C2H2	PF00096.26	1.2e-40	1	5
ENSORLP00020022399	zf-C2H2	PF00096.26	1.2e-40	2	5
ENSORLP00020022399	zf-C2H2	PF00096.26	1.2e-40	3	5
ENSORLP00020022399	zf-C2H2	PF00096.26	1.2e-40	4	5
ENSORLP00020022399	zf-C2H2	PF00096.26	1.2e-40	5	5
ENSORLP00020001928	zf-C2H2	PF00096.26	8.9e-16	1	3
ENSORLP00020001928	zf-C2H2	PF00096.26	8.9e-16	2	3
ENSORLP00020001928	zf-C2H2	PF00096.26	8.9e-16	3	3
ENSORLP00020001928	zf-met	PF12874.7	8.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020012200	-	3938	-	ENSORLP00020022399	1292 (aa)	-	-
ENSORLT00020012195	-	1781	-	ENSORLP00020001928	413 (aa)	-	-

Gene Model

Click here to download ENSORLG00020002653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020002653's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020002653	-	62	31.959	ENSORLG00020007018	-	80	31.959
ENSORLG00020002653	-	52	31.944	ENSORLG00020009419	-	80	31.250
ENSORLG00020002653	-	51	30.556	ENSORLG00020010953	-	71	30.556
ENSORLG00020002653	-	52	50.000	ENSORLG00020010560	-	97	31.655
ENSORLG00020002653	-	69	31.469	ENSORLG00020009184	-	97	31.469
ENSORLG00020002653	-	52	32.381	ENSORLG00020007074	-	65	32.381

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020002653	-	65	30.097	ENSMOCG00000007791	-	68	30.097	Microtus_ochrogaster