EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020002841 (Gene tree)
Gene ID: -
Gene Symbol: pum3
Alias: -
Full Name: pumilio RNA-binding family member 3
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 11777 bases
Position: chr12:26177346-26189122
Accession: ZDB-GENE-030131-9808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020002114	CPL	PF08144.11	1.3e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020011883	-	4009	-	ENSORLP00020002114	644 (aa)	-	-

Gene Model

Click here to download ENSORLG00020002841's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020002841's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020002841	pum3	99	52.049	ENSG00000080608	PUM3	91	55.952	Homo_sapiens
ENSORLG00020002841	pum3	100	73.425	ENSAPOG00000020252	pum3	100	73.579	Acanthochromis_polyacanthus
ENSORLG00020002841	pum3	81	59.082	ENSAMEG00000012187	PUM3	91	55.707	Ailuropoda_melanoleuca
ENSORLG00020002841	pum3	91	69.831	ENSACIG00000009786	pum3	97	69.831	Amphilophus_citrinellus
ENSORLG00020002841	pum3	100	73.579	ENSAOCG00000004439	pum3	100	73.733	Amphiprion_ocellaris
ENSORLG00020002841	pum3	100	73.579	ENSAPEG00000020523	pum3	100	73.733	Amphiprion_percula
ENSORLG00020002841	pum3	99	73.806	ENSATEG00000005799	pum3	99	72.188	Anabas_testudineus
ENSORLG00020002841	pum3	93	54.886	ENSAPLG00000002920	PUM3	99	54.886	Anas_platyrhynchos
ENSORLG00020002841	pum3	86	55.052	ENSACAG00000003174	PUM3	97	55.052	Anolis_carolinensis
ENSORLG00020002841	pum3	99	52.432	ENSANAG00000024520	PUM3	94	55.172	Aotus_nancymaae
ENSORLG00020002841	pum3	100	71.407	ENSACLG00000001017	pum3	100	71.407	Astatotilapia_calliptera
ENSORLG00020002841	pum3	99	61.610	ENSAMXG00000020911	pum3	99	59.724	Astyanax_mexicanus
ENSORLG00020002841	pum3	99	52.566	ENSBTAG00000013357	PUM3	89	54.806	Bos_taurus
ENSORLG00020002841	pum3	99	52.432	ENSCJAG00000010917	PUM3	94	55.172	Callithrix_jacchus
ENSORLG00020002841	pum3	89	53.807	ENSCAFG00000002035	PUM3	91	54.146	Canis_familiaris
ENSORLG00020002841	pum3	89	53.807	ENSCAFG00020026867	PUM3	91	54.146	Canis_lupus_dingo
ENSORLG00020002841	pum3	99	53.188	ENSCHIG00000021559	PUM3	89	55.481	Capra_hircus
ENSORLG00020002841	pum3	98	53.333	ENSTSYG00000007481	PUM3	94	53.366	Carlito_syrichta
ENSORLG00020002841	pum3	99	51.322	ENSCAPG00000010592	-	89	53.199	Cavia_aperea
ENSORLG00020002841	pum3	99	53.271	ENSCPOG00000008552	-	92	54.620	Cavia_porcellus
ENSORLG00020002841	pum3	99	51.520	ENSCCAG00000032650	PUM3	94	54.590	Cebus_capucinus
ENSORLG00020002841	pum3	99	52.719	ENSCATG00000024880	PUM3	91	55.952	Cercocebus_atys
ENSORLG00020002841	pum3	99	53.033	ENSCLAG00000011892	PUM3	89	55.481	Chinchilla_lanigera
ENSORLG00020002841	pum3	99	52.504	ENSCSAG00000008691	PUM3	91	55.952	Chlorocebus_sabaeus
ENSORLG00020002841	pum3	65	55.107	ENSCHOG00000002535	PUM3	62	55.107	Choloepus_hoffmanni
ENSORLG00020002841	pum3	98	53.385	ENSCPBG00000025470	PUM3	91	55.882	Chrysemys_picta_bellii
ENSORLG00020002841	pum3	85	38.640	ENSCING00000024199	-	99	38.640	Ciona_intestinalis
ENSORLG00020002841	pum3	90	38.655	ENSCSAVG00000006072	-	99	39.122	Ciona_savignyi
ENSORLG00020002841	pum3	99	52.504	ENSCANG00000006142	PUM3	89	55.987	Colobus_angolensis_palliatus
ENSORLG00020002841	pum3	99	53.120	ENSCGRG00001016402	Pum3	92	54.950	Cricetulus_griseus_chok1gshd
ENSORLG00020002841	pum3	99	53.120	ENSCGRG00000010207	Pum3	92	54.950	Cricetulus_griseus_crigri
ENSORLG00020002841	pum3	89	71.306	ENSCSEG00000001565	pum3	99	71.675	Cynoglossus_semilaevis
ENSORLG00020002841	pum3	70	68.881	ENSCVAG00000006550	pum3	100	68.881	Cyprinodon_variegatus
ENSORLG00020002841	pum3	99	60.930	ENSDARG00000087779	pum3	99	59.202	Danio_rerio
ENSORLG00020002841	pum3	99	44.042	ENSDNOG00000008157	PUM3	70	45.205	Dasypus_novemcinctus
ENSORLG00020002841	pum3	81	59.273	ENSETEG00000015331	PUM3	82	59.287	Echinops_telfairi
ENSORLG00020002841	pum3	84	41.081	ENSEBUG00000011586	pum3	86	40.206	Eptatretus_burgeri
ENSORLG00020002841	pum3	96	53.710	ENSEASG00005010350	PUM3	92	54.351	Equus_asinus_asinus
ENSORLG00020002841	pum3	96	53.710	ENSECAG00000017193	PUM3	89	55.387	Equus_caballus
ENSORLG00020002841	pum3	86	47.359	ENSEEUG00000010314	PUM3	100	46.774	Erinaceus_europaeus
ENSORLG00020002841	pum3	99	58.663	ENSELUG00000002215	pum3	99	58.806	Esox_lucius
ENSORLG00020002841	pum3	99	53.763	ENSFALG00000010509	PUM3	91	56.971	Ficedula_albicollis
ENSORLG00020002841	pum3	99	52.736	ENSFDAG00000021027	PUM3	99	52.280	Fukomys_damarensis
ENSORLG00020002841	pum3	100	73.298	ENSFHEG00000015576	pum3	100	73.298	Fundulus_heteroclitus
ENSORLG00020002841	pum3	82	66.855	ENSGMOG00000014217	pum3	99	66.855	Gadus_morhua
ENSORLG00020002841	pum3	90	56.552	ENSGALG00000010178	PUM3	91	56.971	Gallus_gallus
ENSORLG00020002841	pum3	56	71.978	ENSGAFG00000001930	pum3	62	71.978	Gambusia_affinis
ENSORLG00020002841	pum3	84	76.103	ENSGACG00000017878	pum3	99	76.103	Gasterosteus_aculeatus
ENSORLG00020002841	pum3	97	54.213	ENSGAGG00000018983	PUM3	98	55.041	Gopherus_agassizii
ENSORLG00020002841	pum3	99	52.352	ENSGGOG00000006143	PUM3	91	55.782	Gorilla_gorilla
ENSORLG00020002841	pum3	100	61.692	ENSHBUG00000012903	pum3	100	60.494	Haplochromis_burtoni
ENSORLG00020002841	pum3	99	51.515	ENSHGLG00000015868	-	94	53.846	Heterocephalus_glaber_female
ENSORLG00020002841	pum3	99	51.515	ENSHGLG00100018825	PUM3	94	53.846	Heterocephalus_glaber_male
ENSORLG00020002841	pum3	100	69.162	ENSHCOG00000010306	pum3	100	69.037	Hippocampus_comes
ENSORLG00020002841	pum3	99	62.539	ENSIPUG00000024801	pum3	99	61.360	Ictalurus_punctatus
ENSORLG00020002841	pum3	99	51.584	ENSSTOG00000009586	PUM3	99	52.049	Ictidomys_tridecemlineatus
ENSORLG00020002841	pum3	99	52.914	ENSJJAG00000012563	Pum3	99	52.454	Jaculus_jaculus
ENSORLG00020002841	pum3	100	76.080	ENSKMAG00000010277	pum3	100	76.080	Kryptolebias_marmoratus
ENSORLG00020002841	pum3	100	70.076	ENSLBEG00000012213	pum3	100	70.382	Labrus_bergylta
ENSORLG00020002841	pum3	93	52.960	ENSLACG00000008312	PUM3	98	52.960	Latimeria_chalumnae
ENSORLG00020002841	pum3	100	58.398	ENSLOCG00000012529	pum3	92	61.407	Lepisosteus_oculatus
ENSORLG00020002841	pum3	99	53.115	ENSLAFG00000017341	PUM3	99	52.584	Loxodonta_africana
ENSORLG00020002841	pum3	99	52.504	ENSMFAG00000001430	PUM3	91	55.952	Macaca_fascicularis
ENSORLG00020002841	pum3	99	52.504	ENSMMUG00000002362	PUM3	89	55.952	Macaca_mulatta
ENSORLG00020002841	pum3	99	52.504	ENSMNEG00000035288	PUM3	91	55.952	Macaca_nemestrina
ENSORLG00020002841	pum3	99	52.417	ENSMLEG00000034820	PUM3	91	55.782	Mandrillus_leucophaeus
ENSORLG00020002841	pum3	100	72.561	ENSMAMG00000022861	pum3	100	71.450	Mastacembelus_armatus
ENSORLG00020002841	pum3	100	71.254	ENSMZEG00005014205	pum3	97	71.254	Maylandia_zebra
ENSORLG00020002841	pum3	94	50.656	ENSMGAG00000002255	PUM3	94	52.876	Meleagris_gallopavo
ENSORLG00020002841	pum3	99	50.608	ENSMAUG00000009733	Pum3	91	54.300	Mesocricetus_auratus
ENSORLG00020002841	pum3	99	51.502	ENSMICG00000045916	PUM3	82	53.859	Microcebus_murinus
ENSORLG00020002841	pum3	99	53.120	ENSMOCG00000019519	-	94	53.607	Microtus_ochrogaster
ENSORLG00020002841	pum3	99	50.920	ENSMOCG00000014830	-	97	51.792	Microtus_ochrogaster
ENSORLG00020002841	pum3	96	66.667	ENSMMOG00000012184	pum3	95	67.057	Mola_mola
ENSORLG00020002841	pum3	93	53.454	ENSMODG00000015417	PUM3	84	53.454	Monodelphis_domestica
ENSORLG00020002841	pum3	100	74.085	ENSMALG00000022164	pum3	92	72.561	Monopterus_albus
ENSORLG00020002841	pum3	99	52.950	MGP_CAROLIEiJ_G0022845	Pum3	91	54.806	Mus_caroli
ENSORLG00020002841	pum3	99	52.329	ENSMUSG00000041360	Pum3	91	54.377	Mus_musculus
ENSORLG00020002841	pum3	99	52.255	MGP_PahariEiJ_G0014338	Pum3	94	53.443	Mus_pahari
ENSORLG00020002841	pum3	99	52.329	MGP_SPRETEiJ_G0023763	Pum3	91	54.377	Mus_spretus
ENSORLG00020002841	pum3	97	53.451	ENSMPUG00000005125	PUM3	99	51.064	Mustela_putorius_furo
ENSORLG00020002841	pum3	99	51.138	ENSMLUG00000002309	PUM3	99	51.290	Myotis_lucifugus
ENSORLG00020002841	pum3	81	56.238	ENSNGAG00000019468	Pum3	94	51.311	Nannospalax_galili
ENSORLG00020002841	pum3	97	66.456	ENSNBRG00000021370	pum3	95	65.260	Neolamprologus_brichardi
ENSORLG00020002841	pum3	95	53.033	ENSNLEG00000008712	PUM3	98	53.397	Nomascus_leucogenys
ENSORLG00020002841	pum3	76	44.262	ENSMEUG00000013606	-	97	44.106	Notamacropus_eugenii
ENSORLG00020002841	pum3	62	43.571	ENSOPRG00000004225	-	64	45.673	Ochotona_princeps
ENSORLG00020002841	pum3	99	53.406	ENSODEG00000003625	-	94	54.010	Octodon_degus
ENSORLG00020002841	pum3	92	49.837	ENSODEG00000016477	-	94	49.837	Octodon_degus
ENSORLG00020002841	pum3	100	72.630	ENSONIG00000012733	pum3	100	72.630	Oreochromis_niloticus
ENSORLG00020002841	pum3	81	56.679	ENSOANG00000014995	PUM3	98	56.742	Ornithorhynchus_anatinus
ENSORLG00020002841	pum3	96	52.827	ENSOCUG00000026104	-	92	54.023	Oryctolagus_cuniculus
ENSORLG00020002841	pum3	96	52.827	ENSOCUG00000004189	-	92	54.620	Oryctolagus_cuniculus
ENSORLG00020002841	pum3	100	98.758	ENSORLG00000014935	pum3	100	98.758	Oryzias_latipes
ENSORLG00020002841	pum3	100	98.447	ENSORLG00015015906	pum3	100	98.447	Oryzias_latipes_hsok
ENSORLG00020002841	pum3	100	91.304	ENSOMEG00000009427	pum3	100	91.304	Oryzias_melastigma
ENSORLG00020002841	pum3	86	41.577	ENSOGAG00000033481	-	81	43.786	Otolemur_garnettii
ENSORLG00020002841	pum3	99	51.824	ENSOGAG00000008125	-	94	54.754	Otolemur_garnettii
ENSORLG00020002841	pum3	99	53.023	ENSOARG00000013337	PUM3	89	55.294	Ovis_aries
ENSORLG00020002841	pum3	99	52.049	ENSPPAG00000041337	PUM3	91	55.782	Pan_paniscus
ENSORLG00020002841	pum3	99	52.492	ENSPPRG00000000809	PUM3	91	53.976	Panthera_pardus
ENSORLG00020002841	pum3	99	52.804	ENSPTIG00000021934	PUM3	91	54.685	Panthera_tigris_altaica
ENSORLG00020002841	pum3	99	52.200	ENSPTRG00000020735	PUM3	91	55.952	Pan_troglodytes
ENSORLG00020002841	pum3	99	52.568	ENSPANG00000025118	PUM3	91	55.952	Papio_anubis
ENSORLG00020002841	pum3	99	59.231	ENSPKIG00000022249	pum3	99	57.835	Paramormyrops_kingsleyae
ENSORLG00020002841	pum3	95	54.762	ENSPSIG00000016272	PUM3	92	57.601	Pelodiscus_sinensis
ENSORLG00020002841	pum3	77	71.313	ENSPMGG00000021261	pum3	99	71.313	Periophthalmus_magnuspinnatus
ENSORLG00020002841	pum3	99	42.857	ENSPEMG00000019340	-	91	43.987	Peromyscus_maniculatus_bairdii
ENSORLG00020002841	pum3	93	54.337	ENSPCIG00000030598	PUM3	82	54.337	Phascolarctos_cinereus
ENSORLG00020002841	pum3	100	65.325	ENSPFOG00000001719	pum3	97	67.119	Poecilia_formosa
ENSORLG00020002841	pum3	100	68.210	ENSPLAG00000020010	pum3	100	68.210	Poecilia_latipinna
ENSORLG00020002841	pum3	100	68.056	ENSPMEG00000017451	pum3	100	68.056	Poecilia_mexicana
ENSORLG00020002841	pum3	65	59.364	ENSPREG00000019478	-	73	54.601	Poecilia_reticulata
ENSORLG00020002841	pum3	99	52.656	ENSPPYG00000019255	PUM3	91	56.122	Pongo_abelii
ENSORLG00020002841	pum3	99	47.568	ENSPCAG00000005797	PUM3	89	49.753	Procavia_capensis
ENSORLG00020002841	pum3	98	52.381	ENSPCOG00000027325	PUM3	89	54.545	Propithecus_coquereli
ENSORLG00020002841	pum3	99	51.657	ENSPVAG00000016135	PUM3	95	50.986	Pteropus_vampyrus
ENSORLG00020002841	pum3	100	71.933	ENSPNYG00000016124	pum3	100	71.933	Pundamilia_nyererei
ENSORLG00020002841	pum3	99	58.243	ENSPNAG00000026524	pum3	99	58.696	Pygocentrus_nattereri
ENSORLG00020002841	pum3	99	52.941	ENSRNOG00000048356	RGD1308750	94	54.098	Rattus_norvegicus
ENSORLG00020002841	pum3	99	53.096	ENSRNOG00000012574	Pum3	94	54.262	Rattus_norvegicus
ENSORLG00020002841	pum3	99	52.504	ENSRBIG00000036924	PUM3	94	54.680	Rhinopithecus_bieti
ENSORLG00020002841	pum3	99	52.656	ENSRROG00000041089	PUM3	94	54.844	Rhinopithecus_roxellana
ENSORLG00020002841	pum3	99	51.824	ENSSBOG00000028066	PUM3	94	54.680	Saimiri_boliviensis_boliviensis
ENSORLG00020002841	pum3	97	52.550	ENSSHAG00000003730	PUM3	99	51.885	Sarcophilus_harrisii
ENSORLG00020002841	pum3	99	57.903	ENSSFOG00015018778	pum3	99	57.585	Scleropages_formosus
ENSORLG00020002841	pum3	100	71.865	ENSSMAG00000013236	pum3	99	72.477	Scophthalmus_maximus
ENSORLG00020002841	pum3	100	72.714	ENSSDUG00000001887	pum3	99	73.613	Seriola_dumerili
ENSORLG00020002841	pum3	100	73.596	ENSSLDG00000015766	pum3	99	74.507	Seriola_lalandi_dorsalis
ENSORLG00020002841	pum3	81	54.962	ENSSARG00000000579	PUM3	96	51.777	Sorex_araneus
ENSORLG00020002841	pum3	94	53.821	ENSSPUG00000001707	PUM3	99	52.160	Sphenodon_punctatus
ENSORLG00020002841	pum3	100	74.343	ENSSPAG00000003976	pum3	100	74.343	Stegastes_partitus
ENSORLG00020002841	pum3	99	53.115	ENSSSCG00000005227	PUM3	89	55.312	Sus_scrofa
ENSORLG00020002841	pum3	97	52.923	ENSTGUG00000005339	PUM3	91	56.034	Taeniopygia_guttata
ENSORLG00020002841	pum3	100	70.928	ENSTRUG00000004074	pum3	99	70.928	Takifugu_rubripes
ENSORLG00020002841	pum3	99	70.233	ENSTNIG00000010325	pum3	98	70.078	Tetraodon_nigroviridis
ENSORLG00020002841	pum3	81	43.810	ENSTBEG00000013058	PUM3	86	43.210	Tupaia_belangeri
ENSORLG00020002841	pum3	99	48.367	ENSTTRG00000001062	PUM3	86	50.253	Tursiops_truncatus
ENSORLG00020002841	pum3	99	47.508	ENSUMAG00000018443	PUM3	99	55.283	Ursus_maritimus
ENSORLG00020002841	pum3	99	51.976	ENSVPAG00000010766	PUM3	91	54.892	Vicugna_pacos
ENSORLG00020002841	pum3	89	53.976	ENSVVUG00000006527	PUM3	91	54.315	Vulpes_vulpes
ENSORLG00020002841	pum3	82	48.864	ENSXETG00000011707	pum3	94	45.875	Xenopus_tropicalis
ENSORLG00020002841	pum3	95	67.101	ENSXCOG00000006725	pum3	98	66.887	Xiphophorus_couchianus
ENSORLG00020002841	pum3	100	67.901	ENSXMAG00000002926	pum3	100	67.901	Xiphophorus_maculatus