EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020003127 (Gene tree)
Gene ID: -
Gene Symbol: si:ch73-21k16.4
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 8200 bases
Position: chr24:13583698-13591897
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020002366	G-patch	PF01585.23	7.8e-16	1	1
ENSORLP00020022687	G-patch	PF01585.23	7.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020011437	-	3415	-	ENSORLP00020002366	529 (aa)	-	-
ENSORLT00020011446	-	1584	-	ENSORLP00020022687	527 (aa)	-	-

Gene Model

Click here to download ENSORLG00020003127's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020003127's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020003127	si:ch73-21k16.4	99	54.479	ENSG00000092978	GPATCH2	97	53.199	Homo_sapiens
ENSORLG00020003127	si:ch73-21k16.4	99	53.297	ENSAMEG00000000532	GPATCH2	97	52.198	Ailuropoda_melanoleuca
ENSORLG00020003127	si:ch73-21k16.4	100	79.962	ENSACIG00000017628	si:ch73-21k16.4	100	79.962	Amphilophus_citrinellus
ENSORLG00020003127	si:ch73-21k16.4	96	78.020	ENSAOCG00000020838	si:ch73-21k16.4	100	78.020	Amphiprion_ocellaris
ENSORLG00020003127	si:ch73-21k16.4	100	86.226	ENSAPEG00000007324	si:ch73-21k16.4	100	86.226	Amphiprion_percula
ENSORLG00020003127	si:ch73-21k16.4	100	76.660	ENSATEG00000003701	si:ch73-21k16.4	100	76.660	Anabas_testudineus
ENSORLG00020003127	si:ch73-21k16.4	97	54.649	ENSAPLG00000005559	GPATCH2	99	53.510	Anas_platyrhynchos
ENSORLG00020003127	si:ch73-21k16.4	98	52.985	ENSACAG00000014945	GPATCH2	93	51.595	Anolis_carolinensis
ENSORLG00020003127	si:ch73-21k16.4	99	54.296	ENSANAG00000032851	GPATCH2	97	53.382	Aotus_nancymaae
ENSORLG00020003127	si:ch73-21k16.4	100	85.822	ENSACLG00000008706	si:ch73-21k16.4	100	85.822	Astatotilapia_calliptera
ENSORLG00020003127	si:ch73-21k16.4	100	67.857	ENSAMXG00000001662	si:ch73-21k16.4	100	66.790	Astyanax_mexicanus
ENSORLG00020003127	si:ch73-21k16.4	99	52.747	ENSBTAG00000001574	GPATCH2	97	52.747	Bos_taurus
ENSORLG00020003127	si:ch73-21k16.4	99	54.662	ENSCJAG00000047537	GPATCH2	88	53.382	Callithrix_jacchus
ENSORLG00020003127	si:ch73-21k16.4	99	53.565	ENSCAFG00000010781	GPATCH2	97	52.651	Canis_familiaris
ENSORLG00020003127	si:ch73-21k16.4	99	52.834	ENSCHIG00000018042	GPATCH2	97	52.834	Capra_hircus
ENSORLG00020003127	si:ch73-21k16.4	97	54.545	ENSCAPG00000007843	GPATCH2	96	53.220	Cavia_aperea
ENSORLG00020003127	si:ch73-21k16.4	99	53.931	ENSCPOG00000003966	GPATCH2	97	52.651	Cavia_porcellus
ENSORLG00020003127	si:ch73-21k16.4	99	54.479	ENSCCAG00000010195	GPATCH2	97	53.565	Cebus_capucinus
ENSORLG00020003127	si:ch73-21k16.4	99	55.037	ENSCATG00000038238	GPATCH2	96	53.731	Cercocebus_atys
ENSORLG00020003127	si:ch73-21k16.4	99	54.479	ENSCLAG00000009274	GPATCH2	97	53.199	Chinchilla_lanigera
ENSORLG00020003127	si:ch73-21k16.4	99	54.579	ENSCPBG00000013037	GPATCH2	99	53.394	Chrysemys_picta_bellii
ENSORLG00020003127	si:ch73-21k16.4	99	54.113	ENSCANG00000031261	GPATCH2	97	53.016	Colobus_angolensis_palliatus
ENSORLG00020003127	si:ch73-21k16.4	97	53.686	ENSCGRG00001024577	Gpatch2	97	51.825	Cricetulus_griseus_chok1gshd
ENSORLG00020003127	si:ch73-21k16.4	97	53.686	ENSCGRG00000015039	Gpatch2	96	52.363	Cricetulus_griseus_crigri
ENSORLG00020003127	si:ch73-21k16.4	100	81.921	ENSCSEG00000002545	si:ch73-21k16.4	100	82.486	Cynoglossus_semilaevis
ENSORLG00020003127	si:ch73-21k16.4	100	85.255	ENSCVAG00000006306	si:ch73-21k16.4	100	85.255	Cyprinodon_variegatus
ENSORLG00020003127	si:ch73-21k16.4	100	67.736	ENSDARG00000101260	GPATCH2	100	67.547	Danio_rerio
ENSORLG00020003127	si:ch73-21k16.4	50	58.545	ENSDNOG00000000826	GPATCH2	94	58.182	Dasypus_novemcinctus
ENSORLG00020003127	si:ch73-21k16.4	97	52.852	ENSDORG00000030155	Gpatch2	96	53.992	Dipodomys_ordii
ENSORLG00020003127	si:ch73-21k16.4	99	51.376	ENSETEG00000012316	GPATCH2	97	50.826	Echinops_telfairi
ENSORLG00020003127	si:ch73-21k16.4	70	40.967	ENSEBUG00000014275	si:ch73-21k16.4	67	41.624	Eptatretus_burgeri
ENSORLG00020003127	si:ch73-21k16.4	99	53.748	ENSEASG00005003507	GPATCH2	97	53.016	Equus_asinus_asinus
ENSORLG00020003127	si:ch73-21k16.4	99	53.748	ENSECAG00000013263	GPATCH2	97	53.016	Equus_caballus
ENSORLG00020003127	si:ch73-21k16.4	96	52.751	ENSEEUG00000008748	GPATCH2	96	52.652	Erinaceus_europaeus
ENSORLG00020003127	si:ch73-21k16.4	100	75.985	ENSELUG00000004934	si:ch73-21k16.4	100	75.797	Esox_lucius
ENSORLG00020003127	si:ch73-21k16.4	99	54.596	ENSFCAG00000007129	GPATCH2	96	53.309	Felis_catus
ENSORLG00020003127	si:ch73-21k16.4	99	52.641	ENSFALG00000012223	GPATCH2	100	52.182	Ficedula_albicollis
ENSORLG00020003127	si:ch73-21k16.4	96	53.346	ENSFDAG00000011026	GPATCH2	96	52.008	Fukomys_damarensis
ENSORLG00020003127	si:ch73-21k16.4	80	87.248	ENSFHEG00000008699	si:ch73-21k16.4	92	85.906	Fundulus_heteroclitus
ENSORLG00020003127	si:ch73-21k16.4	81	89.147	ENSGMOG00000001595	si:ch73-21k16.4	82	84.496	Gadus_morhua
ENSORLG00020003127	si:ch73-21k16.4	99	54.144	ENSGALG00000009627	GPATCH2	99	53.039	Gallus_gallus
ENSORLG00020003127	si:ch73-21k16.4	100	85.633	ENSGAFG00000005041	si:ch73-21k16.4	100	85.633	Gambusia_affinis
ENSORLG00020003127	si:ch73-21k16.4	99	81.168	ENSGACG00000013427	si:ch73-21k16.4	100	81.168	Gasterosteus_aculeatus
ENSORLG00020003127	si:ch73-21k16.4	99	53.945	ENSGAGG00000013122	GPATCH2	99	52.661	Gopherus_agassizii
ENSORLG00020003127	si:ch73-21k16.4	99	54.296	ENSGGOG00000009440	GPATCH2	97	53.382	Gorilla_gorilla
ENSORLG00020003127	si:ch73-21k16.4	100	85.822	ENSHBUG00000014399	si:ch73-21k16.4	100	85.822	Haplochromis_burtoni
ENSORLG00020003127	si:ch73-21k16.4	99	53.382	ENSHGLG00000019513	GPATCH2	97	52.102	Heterocephalus_glaber_female
ENSORLG00020003127	si:ch73-21k16.4	99	53.382	ENSHGLG00100003689	GPATCH2	97	52.102	Heterocephalus_glaber_male
ENSORLG00020003127	si:ch73-21k16.4	100	67.932	ENSHCOG00000011331	si:ch73-21k16.4	100	67.742	Hippocampus_comes
ENSORLG00020003127	si:ch73-21k16.4	100	55.597	ENSIPUG00000012840	si:ch73-21k16.4	100	55.224	Ictalurus_punctatus
ENSORLG00020003127	si:ch73-21k16.4	99	53.748	ENSSTOG00000024959	GPATCH2	97	52.834	Ictidomys_tridecemlineatus
ENSORLG00020003127	si:ch73-21k16.4	98	54.478	ENSJJAG00000019244	Gpatch2	94	53.172	Jaculus_jaculus
ENSORLG00020003127	si:ch73-21k16.4	100	85.444	ENSLBEG00000008187	si:ch73-21k16.4	100	85.444	Labrus_bergylta
ENSORLG00020003127	si:ch73-21k16.4	100	56.192	ENSLACG00000013951	GPATCH2	100	55.720	Latimeria_chalumnae
ENSORLG00020003127	si:ch73-21k16.4	100	60.183	ENSLOCG00000016058	si:ch73-21k16.4	100	60.367	Lepisosteus_oculatus
ENSORLG00020003127	si:ch73-21k16.4	97	54.356	ENSLAFG00000003787	GPATCH2	97	52.841	Loxodonta_africana
ENSORLG00020003127	si:ch73-21k16.4	99	54.479	ENSMFAG00000000617	GPATCH2	97	53.382	Macaca_fascicularis
ENSORLG00020003127	si:ch73-21k16.4	99	54.479	ENSMMUG00000014946	GPATCH2	97	53.382	Macaca_mulatta
ENSORLG00020003127	si:ch73-21k16.4	99	54.479	ENSMNEG00000034969	GPATCH2	97	53.382	Macaca_nemestrina
ENSORLG00020003127	si:ch73-21k16.4	99	54.479	ENSMLEG00000032285	GPATCH2	97	53.382	Mandrillus_leucophaeus
ENSORLG00020003127	si:ch73-21k16.4	100	88.113	ENSMAMG00000015684	si:ch73-21k16.4	100	88.113	Mastacembelus_armatus
ENSORLG00020003127	si:ch73-21k16.4	100	85.822	ENSMZEG00005015040	si:ch73-21k16.4	100	85.822	Maylandia_zebra
ENSORLG00020003127	si:ch73-21k16.4	56	56.908	ENSMGAG00000009428	GPATCH2	93	57.188	Meleagris_gallopavo
ENSORLG00020003127	si:ch73-21k16.4	99	54.029	ENSMAUG00000004851	Gpatch2	97	52.747	Mesocricetus_auratus
ENSORLG00020003127	si:ch73-21k16.4	99	54.113	ENSMICG00000037090	GPATCH2	97	52.834	Microcebus_murinus
ENSORLG00020003127	si:ch73-21k16.4	97	53.875	ENSMOCG00000020821	Gpatch2	97	51.913	Microtus_ochrogaster
ENSORLG00020003127	si:ch73-21k16.4	100	74.302	ENSMMOG00000015329	si:ch73-21k16.4	100	74.488	Mola_mola
ENSORLG00020003127	si:ch73-21k16.4	99	52.564	ENSMODG00000004195	GPATCH2	93	52.468	Monodelphis_domestica
ENSORLG00020003127	si:ch73-21k16.4	100	79.696	ENSMALG00000016801	si:ch73-21k16.4	100	79.696	Monopterus_albus
ENSORLG00020003127	si:ch73-21k16.4	98	52.533	MGP_CAROLIEiJ_G0015030	Gpatch2	96	50.669	Mus_caroli
ENSORLG00020003127	si:ch73-21k16.4	98	52.345	ENSMUSG00000039210	Gpatch2	96	50.570	Mus_musculus
ENSORLG00020003127	si:ch73-21k16.4	98	54.034	MGP_PahariEiJ_G0028262	Gpatch2	96	52.199	Mus_pahari
ENSORLG00020003127	si:ch73-21k16.4	98	52.612	MGP_SPRETEiJ_G0015830	Gpatch2	96	50.760	Mus_spretus
ENSORLG00020003127	si:ch73-21k16.4	99	53.565	ENSMPUG00000004269	GPATCH2	97	52.834	Mustela_putorius_furo
ENSORLG00020003127	si:ch73-21k16.4	99	52.477	ENSNGAG00000002207	Gpatch2	97	51.193	Nannospalax_galili
ENSORLG00020003127	si:ch73-21k16.4	100	77.883	ENSNBRG00000020932	si:ch73-21k16.4	100	77.883	Neolamprologus_brichardi
ENSORLG00020003127	si:ch73-21k16.4	99	54.479	ENSNLEG00000014201	GPATCH2	97	53.565	Nomascus_leucogenys
ENSORLG00020003127	si:ch73-21k16.4	96	48.669	ENSMEUG00000012239	GPATCH2	96	48.479	Notamacropus_eugenii
ENSORLG00020003127	si:ch73-21k16.4	99	51.920	ENSOPRG00000010126	GPATCH2	97	50.365	Ochotona_princeps
ENSORLG00020003127	si:ch73-21k16.4	99	53.016	ENSODEG00000014927	GPATCH2	97	51.737	Octodon_degus
ENSORLG00020003127	si:ch73-21k16.4	100	85.822	ENSONIG00000000570	si:ch73-21k16.4	100	85.822	Oreochromis_niloticus
ENSORLG00020003127	si:ch73-21k16.4	96	50.717	ENSOANG00000008549	GPATCH2	97	50.449	Ornithorhynchus_anatinus
ENSORLG00020003127	si:ch73-21k16.4	99	54.113	ENSOCUG00000014512	GPATCH2	97	52.834	Oryctolagus_cuniculus
ENSORLG00020003127	si:ch73-21k16.4	100	99.057	ENSORLG00000016810	si:ch73-21k16.4	100	99.057	Oryzias_latipes
ENSORLG00020003127	si:ch73-21k16.4	100	99.057	ENSORLG00015022304	si:ch73-21k16.4	100	99.057	Oryzias_latipes_hsok
ENSORLG00020003127	si:ch73-21k16.4	100	97.353	ENSOMEG00000017809	si:ch73-21k16.4	100	97.436	Oryzias_melastigma
ENSORLG00020003127	si:ch73-21k16.4	99	55.210	ENSOGAG00000004485	GPATCH2	97	53.931	Otolemur_garnettii
ENSORLG00020003127	si:ch73-21k16.4	99	53.016	ENSOARG00000011440	GPATCH2	97	53.016	Ovis_aries
ENSORLG00020003127	si:ch73-21k16.4	99	54.296	ENSPPAG00000038887	GPATCH2	97	53.382	Pan_paniscus
ENSORLG00020003127	si:ch73-21k16.4	99	54.396	ENSPPRG00000013363	GPATCH2	96	53.114	Panthera_pardus
ENSORLG00020003127	si:ch73-21k16.4	99	54.296	ENSPTRG00000001986	GPATCH2	97	53.382	Pan_troglodytes
ENSORLG00020003127	si:ch73-21k16.4	99	54.479	ENSPANG00000020943	GPATCH2	97	53.382	Papio_anubis
ENSORLG00020003127	si:ch73-21k16.4	100	65.363	ENSPKIG00000004245	si:ch73-21k16.4	100	65.177	Paramormyrops_kingsleyae
ENSORLG00020003127	si:ch73-21k16.4	99	55.210	ENSPSIG00000005373	GPATCH2	100	53.931	Pelodiscus_sinensis
ENSORLG00020003127	si:ch73-21k16.4	100	77.083	ENSPMGG00000000611	si:ch73-21k16.4	100	77.083	Periophthalmus_magnuspinnatus
ENSORLG00020003127	si:ch73-21k16.4	97	53.030	ENSPEMG00000018364	Gpatch2	95	51.894	Peromyscus_maniculatus_bairdii
ENSORLG00020003127	si:ch73-21k16.4	99	52.747	ENSPCIG00000027888	GPATCH2	97	52.651	Phascolarctos_cinereus
ENSORLG00020003127	si:ch73-21k16.4	100	86.389	ENSPFOG00000008062	si:ch73-21k16.4	100	86.389	Poecilia_formosa
ENSORLG00020003127	si:ch73-21k16.4	100	86.389	ENSPLAG00000022219	si:ch73-21k16.4	100	86.389	Poecilia_latipinna
ENSORLG00020003127	si:ch73-21k16.4	100	86.200	ENSPMEG00000010687	si:ch73-21k16.4	100	86.588	Poecilia_mexicana
ENSORLG00020003127	si:ch73-21k16.4	99	81.767	ENSPREG00000011915	si:ch73-21k16.4	98	81.767	Poecilia_reticulata
ENSORLG00020003127	si:ch73-21k16.4	99	50.091	ENSPPYG00000000216	GPATCH2	96	49.177	Pongo_abelii
ENSORLG00020003127	si:ch73-21k16.4	97	44.592	ENSPCAG00000013998	GPATCH2	99	44.697	Procavia_capensis
ENSORLG00020003127	si:ch73-21k16.4	99	54.973	ENSPVAG00000010649	GPATCH2	96	53.455	Pteropus_vampyrus
ENSORLG00020003127	si:ch73-21k16.4	100	85.822	ENSPNYG00000014144	si:ch73-21k16.4	100	85.822	Pundamilia_nyererei
ENSORLG00020003127	si:ch73-21k16.4	99	54.296	ENSRROG00000012833	GPATCH2	97	53.199	Rhinopithecus_roxellana
ENSORLG00020003127	si:ch73-21k16.4	99	54.296	ENSSBOG00000028891	GPATCH2	97	53.016	Saimiri_boliviensis_boliviensis
ENSORLG00020003127	si:ch73-21k16.4	96	49.806	ENSSHAG00000015123	GPATCH2	95	49.421	Sarcophilus_harrisii
ENSORLG00020003127	si:ch73-21k16.4	100	64.366	ENSSFOG00015000674	gpatch2	100	63.687	Scleropages_formosus
ENSORLG00020003127	si:ch73-21k16.4	100	86.226	ENSSMAG00000009585	si:ch73-21k16.4	100	86.226	Scophthalmus_maximus
ENSORLG00020003127	si:ch73-21k16.4	100	88.847	ENSSDUG00000011998	si:ch73-21k16.4	100	88.847	Seriola_dumerili
ENSORLG00020003127	si:ch73-21k16.4	100	89.036	ENSSLDG00000025385	si:ch73-21k16.4	100	89.036	Seriola_lalandi_dorsalis
ENSORLG00020003127	si:ch73-21k16.4	97	53.220	ENSSARG00000013063	GPATCH2	96	52.652	Sorex_araneus
ENSORLG00020003127	si:ch73-21k16.4	100	88.847	ENSSPAG00000023569	si:ch73-21k16.4	100	88.847	Stegastes_partitus
ENSORLG00020003127	si:ch73-21k16.4	99	54.015	ENSSSCG00000027207	GPATCH2	97	52.651	Sus_scrofa
ENSORLG00020003127	si:ch73-21k16.4	100	85.094	ENSTRUG00000015569	si:ch73-21k16.4	100	84.906	Takifugu_rubripes
ENSORLG00020003127	si:ch73-21k16.4	97	81.395	ENSTNIG00000016304	si:ch73-21k16.4	96	81.589	Tetraodon_nigroviridis
ENSORLG00020003127	si:ch73-21k16.4	62	72.093	ENSTTRG00000003739	GPATCH2	79	72.093	Tursiops_truncatus
ENSORLG00020003127	si:ch73-21k16.4	99	53.565	ENSUMAG00000020588	GPATCH2	97	52.468	Ursus_maritimus
ENSORLG00020003127	si:ch73-21k16.4	99	53.455	ENSVPAG00000005192	GPATCH2	97	52.182	Vicugna_pacos
ENSORLG00020003127	si:ch73-21k16.4	99	53.565	ENSVVUG00000012998	GPATCH2	97	52.651	Vulpes_vulpes
ENSORLG00020003127	si:ch73-21k16.4	97	54.972	ENSXETG00000021194	gpatch2	94	53.659	Xenopus_tropicalis
ENSORLG00020003127	si:ch73-21k16.4	100	82.231	ENSXCOG00000007145	si:ch73-21k16.4	100	82.231	Xiphophorus_couchianus
ENSORLG00020003127	si:ch73-21k16.4	100	85.066	ENSXMAG00000004679	si:ch73-21k16.4	100	85.066	Xiphophorus_maculatus