EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020003139 (Gene tree)
Gene ID: -
Gene Symbol: zgc:110045
Alias: -
Full Name: zgc:110045
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 7355 bases
Position: chr15:28623909-28631263
Accession: ZDB-GENE-050706-149
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020002377	KH_1	PF00013.29	3e-53	1	3
ENSORLP00020002377	KH_1	PF00013.29	3e-53	2	3
ENSORLP00020002377	KH_1	PF00013.29	3e-53	3	3
ENSORLP00020022694	KH_1	PF00013.29	1.6e-31	1	2
ENSORLP00020022694	KH_1	PF00013.29	1.6e-31	2	2
ENSORLP00020022694	KH_2	PF07650.17	3.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020011431	-	708	-	ENSORLP00020022694	235 (aa)	-	-
ENSORLT00020011408	-	2075	-	ENSORLP00020002377	433 (aa)	-	-

Gene Model

Click here to download ENSORLG00020003139's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020003139's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020003139	zgc:110045	74	32.911	ENSORLG00020003562	igf2bp3	65	32.911
ENSORLG00020003139	zgc:110045	68	42.188	ENSORLG00020019124	-	64	35.821
ENSORLG00020003139	zgc:110045	68	39.726	ENSORLG00020019624	fubp3	68	39.726
ENSORLG00020003139	zgc:110045	61	35.821	ENSORLG00020004573	nova1	59	35.821
ENSORLG00020003139	zgc:110045	99	55.385	ENSORLG00020001183	-	97	55.604
ENSORLG00020003139	zgc:110045	90	35.433	ENSORLG00020001556	igf2bp2b	61	35.252
ENSORLG00020003139	zgc:110045	86	66.507	ENSORLG00020016290	pcbp2	95	70.779
ENSORLG00020003139	zgc:110045	74	40.000	ENSORLG00020008118	hnrpkl	59	47.761
ENSORLG00020003139	zgc:110045	69	40.000	ENSORLG00020019741	hnrnpk	56	47.059
ENSORLG00020003139	zgc:110045	69	35.366	ENSORLG00020013143	-	62	35.366
ENSORLG00020003139	zgc:110045	86	67.464	ENSORLG00020017901	PCBP2	95	71.987
ENSORLG00020003139	zgc:110045	86	71.429	ENSORLG00020012671	pcbp3	96	73.871
ENSORLG00020003139	zgc:110045	87	74.146	ENSORLG00020006124	-	97	73.651
ENSORLG00020003139	zgc:110045	64	31.250	ENSORLG00020005908	fubp1	58	37.662

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020003139	zgc:110045	88	72.430	ENSG00000183570	PCBP3	97	68.857	Homo_sapiens
ENSORLG00020003139	zgc:110045	100	84.462	ENSAPOG00000023735	zgc:110045	97	95.886	Acanthochromis_polyacanthus
ENSORLG00020003139	zgc:110045	89	96.651	ENSACIG00000002577	zgc:110045	99	96.651	Amphilophus_citrinellus
ENSORLG00020003139	zgc:110045	82	94.949	ENSAOCG00000005266	zgc:110045	94	94.949	Amphiprion_ocellaris
ENSORLG00020003139	zgc:110045	100	92.396	ENSAPEG00000000729	zgc:110045	100	91.705	Amphiprion_percula
ENSORLG00020003139	zgc:110045	97	84.928	ENSATEG00000011191	zgc:110045	100	84.058	Anabas_testudineus
ENSORLG00020003139	zgc:110045	100	91.475	ENSACLG00000019285	zgc:110045	100	91.244	Astatotilapia_calliptera
ENSORLG00020003139	zgc:110045	86	73.460	ENSBTAG00000030775	PCBP3	97	68.286	Bos_taurus
ENSORLG00020003139	zgc:110045	86	73.460	ENSCAFG00000011907	PCBP3	88	71.988	Canis_familiaris
ENSORLG00020003139	zgc:110045	86	75.610	ENSCHIG00000015841	PCBP3	87	69.369	Capra_hircus
ENSORLG00020003139	zgc:110045	91	70.259	ENSTSYG00000005254	PCBP3	95	70.259	Carlito_syrichta
ENSORLG00020003139	zgc:110045	86	55.882	ENSCAPG00000006767	PCBP3	81	55.927	Cavia_aperea
ENSORLG00020003139	zgc:110045	86	73.460	ENSCPOG00000003648	PCBP3	89	71.772	Cavia_porcellus
ENSORLG00020003139	zgc:110045	86	73.460	ENSCCAG00000024561	PCBP3	99	66.087	Cebus_capucinus
ENSORLG00020003139	zgc:110045	86	73.460	ENSCATG00000038419	PCBP3	88	76.358	Cercocebus_atys
ENSORLG00020003139	zgc:110045	86	73.460	ENSCLAG00000006667	PCBP3	88	71.772	Chinchilla_lanigera
ENSORLG00020003139	zgc:110045	86	73.460	ENSCANG00000026757	PCBP3	88	76.358	Colobus_angolensis_palliatus
ENSORLG00020003139	zgc:110045	86	73.460	ENSCGRG00001006836	Pcbp3	88	71.772	Cricetulus_griseus_chok1gshd
ENSORLG00020003139	zgc:110045	86	73.460	ENSCGRG00000001837	Pcbp3	88	71.772	Cricetulus_griseus_crigri
ENSORLG00020003139	zgc:110045	100	88.940	ENSCSEG00000010020	zgc:110045	97	93.987	Cynoglossus_semilaevis
ENSORLG00020003139	zgc:110045	86	91.262	ENSCVAG00000004726	zgc:110045	93	91.262	Cyprinodon_variegatus
ENSORLG00020003139	zgc:110045	89	76.498	ENSDARG00000057141	zgc:110045	97	79.263	Danio_rerio
ENSORLG00020003139	zgc:110045	86	73.460	ENSDNOG00000049518	PCBP3	89	71.772	Dasypus_novemcinctus
ENSORLG00020003139	zgc:110045	87	68.996	ENSDORG00000003640	Pcbp3	93	68.996	Dipodomys_ordii
ENSORLG00020003139	zgc:110045	93	66.079	ENSEBUG00000009697	zgc:110045	99	66.512	Eptatretus_burgeri
ENSORLG00020003139	zgc:110045	86	73.684	ENSEASG00005007068	PCBP3	88	76.038	Equus_asinus_asinus
ENSORLG00020003139	zgc:110045	86	73.684	ENSECAG00000012413	PCBP3	88	76.038	Equus_caballus
ENSORLG00020003139	zgc:110045	100	81.651	ENSELUG00000019784	zgc:110045	100	81.651	Esox_lucius
ENSORLG00020003139	zgc:110045	86	73.460	ENSFCAG00000014812	PCBP3	88	76.358	Felis_catus
ENSORLG00020003139	zgc:110045	86	73.460	ENSFDAG00000009117	PCBP3	88	76.038	Fukomys_damarensis
ENSORLG00020003139	zgc:110045	82	92.040	ENSFHEG00000018838	-	92	92.537	Fundulus_heteroclitus
ENSORLG00020003139	zgc:110045	84	86.124	ENSGMOG00000005953	zgc:110045	93	89.902	Gadus_morhua
ENSORLG00020003139	zgc:110045	90	93.151	ENSGAFG00000017864	zgc:110045	96	95.872	Gambusia_affinis
ENSORLG00020003139	zgc:110045	59	78.571	ENSGAFG00000017860	-	100	77.041	Gambusia_affinis
ENSORLG00020003139	zgc:110045	88	89.815	ENSGACG00000003044	zgc:110045	97	93.631	Gasterosteus_aculeatus
ENSORLG00020003139	zgc:110045	86	73.460	ENSGGOG00000003683	PCBP3	88	76.358	Gorilla_gorilla
ENSORLG00020003139	zgc:110045	100	84.064	ENSHBUG00000012495	zgc:110045	97	95.886	Haplochromis_burtoni
ENSORLG00020003139	zgc:110045	86	75.122	ENSHGLG00000018620	PCBP3	89	71.772	Heterocephalus_glaber_female
ENSORLG00020003139	zgc:110045	86	75.122	ENSHGLG00100013590	PCBP3	89	71.772	Heterocephalus_glaber_male
ENSORLG00020003139	zgc:110045	89	89.450	ENSHCOG00000000818	zgc:110045	99	89.450	Hippocampus_comes
ENSORLG00020003139	zgc:110045	89	73.394	ENSIPUG00000003932	zgc:110045	81	76.147	Ictalurus_punctatus
ENSORLG00020003139	zgc:110045	86	73.460	ENSSTOG00000007178	PCBP3	88	71.772	Ictidomys_tridecemlineatus
ENSORLG00020003139	zgc:110045	86	74.163	ENSJJAG00000021192	Pcbp3	88	72.072	Jaculus_jaculus
ENSORLG00020003139	zgc:110045	96	79.070	ENSKMAG00000016179	-	95	96.410	Kryptolebias_marmoratus
ENSORLG00020003139	zgc:110045	82	91.089	ENSLBEG00000023074	zgc:110045	97	86.486	Labrus_bergylta
ENSORLG00020003139	zgc:110045	86	73.810	ENSLAFG00000020835	PCBP3	96	73.932	Loxodonta_africana
ENSORLG00020003139	zgc:110045	86	73.460	ENSMFAG00000034574	PCBP3	88	76.358	Macaca_fascicularis
ENSORLG00020003139	zgc:110045	86	73.460	ENSMMUG00000003825	PCBP3	99	70.588	Macaca_mulatta
ENSORLG00020003139	zgc:110045	86	73.460	ENSMNEG00000035551	PCBP3	97	76.358	Macaca_nemestrina
ENSORLG00020003139	zgc:110045	86	73.460	ENSMLEG00000038785	PCBP3	97	68.634	Mandrillus_leucophaeus
ENSORLG00020003139	zgc:110045	89	90.826	ENSMAMG00000014389	zgc:110045	99	94.904	Mastacembelus_armatus
ENSORLG00020003139	zgc:110045	100	91.475	ENSMZEG00005011785	zgc:110045	100	91.244	Maylandia_zebra
ENSORLG00020003139	zgc:110045	85	77.387	ENSMAUG00000007036	Pcbp3	87	72.340	Mesocricetus_auratus
ENSORLG00020003139	zgc:110045	86	72.986	ENSMICG00000012679	PCBP3	88	76.038	Microcebus_murinus
ENSORLG00020003139	zgc:110045	86	73.460	ENSMOCG00000016127	Pcbp3	88	71.772	Microtus_ochrogaster
ENSORLG00020003139	zgc:110045	58	83.770	ENSMMOG00000008398	-	100	82.199	Mola_mola
ENSORLG00020003139	zgc:110045	82	92.228	ENSMMOG00000008399	zgc:110045	95	92.228	Mola_mola
ENSORLG00020003139	zgc:110045	81	94.241	ENSMALG00000008763	zgc:110045	96	94.241	Monopterus_albus
ENSORLG00020003139	zgc:110045	87	73.585	MGP_CAROLIEiJ_G0015475	Pcbp3	99	72.926	Mus_caroli
ENSORLG00020003139	zgc:110045	87	73.585	ENSMUSG00000001120	Pcbp3	99	72.926	Mus_musculus
ENSORLG00020003139	zgc:110045	87	73.585	MGP_PahariEiJ_G0030889	Pcbp3	99	72.926	Mus_pahari
ENSORLG00020003139	zgc:110045	87	73.585	MGP_SPRETEiJ_G0016288	Pcbp3	99	72.926	Mus_spretus
ENSORLG00020003139	zgc:110045	86	73.460	ENSMLUG00000003074	PCBP3	88	71.772	Myotis_lucifugus
ENSORLG00020003139	zgc:110045	86	73.460	ENSNGAG00000005416	Pcbp3	88	71.772	Nannospalax_galili
ENSORLG00020003139	zgc:110045	100	91.935	ENSNBRG00000017646	zgc:110045	100	91.705	Neolamprologus_brichardi
ENSORLG00020003139	zgc:110045	86	73.460	ENSNLEG00000002639	PCBP3	88	76.358	Nomascus_leucogenys
ENSORLG00020003139	zgc:110045	88	68.103	ENSMEUG00000012960	PCBP3	97	66.571	Notamacropus_eugenii
ENSORLG00020003139	zgc:110045	86	76.355	ENSODEG00000012873	PCBP3	89	69.369	Octodon_degus
ENSORLG00020003139	zgc:110045	100	87.991	ENSONIG00000010370	zgc:110045	100	87.760	Oreochromis_niloticus
ENSORLG00020003139	zgc:110045	86	68.996	ENSOANG00000006265	PCBP3	90	71.094	Ornithorhynchus_anatinus
ENSORLG00020003139	zgc:110045	100	98.848	ENSORLG00000014385	-	100	98.848	Oryzias_latipes
ENSORLG00020003139	zgc:110045	100	93.779	ENSOMEG00000015459	-	100	95.161	Oryzias_melastigma
ENSORLG00020003139	zgc:110045	86	69.194	ENSOARG00000012704	PCBP3	88	69.789	Ovis_aries
ENSORLG00020003139	zgc:110045	86	73.460	ENSPPAG00000021940	PCBP3	88	76.358	Pan_paniscus
ENSORLG00020003139	zgc:110045	86	73.460	ENSPPRG00000003933	PCBP3	88	76.358	Panthera_pardus
ENSORLG00020003139	zgc:110045	86	55.288	ENSPTIG00000012038	PCBP3	87	62.939	Panthera_tigris_altaica
ENSORLG00020003139	zgc:110045	86	46.445	ENSPTRG00000014010	PCBP3	97	50.568	Pan_troglodytes
ENSORLG00020003139	zgc:110045	86	73.460	ENSPANG00000023631	PCBP3	88	76.358	Papio_anubis
ENSORLG00020003139	zgc:110045	88	60.386	ENSPMGG00000022531	-	96	60.386	Periophthalmus_magnuspinnatus
ENSORLG00020003139	zgc:110045	100	72.912	ENSPMGG00000021588	-	99	72.686	Periophthalmus_magnuspinnatus
ENSORLG00020003139	zgc:110045	86	73.460	ENSPEMG00000000587	Pcbp3	88	71.772	Peromyscus_maniculatus_bairdii
ENSORLG00020003139	zgc:110045	60	65.000	ENSPMAG00000004719	zgc:110045	94	70.833	Petromyzon_marinus
ENSORLG00020003139	zgc:110045	99	83.468	ENSPFOG00000002348	zgc:110045	100	91.867	Poecilia_formosa
ENSORLG00020003139	zgc:110045	93	93.607	ENSPLAG00000017488	zgc:110045	100	93.607	Poecilia_latipinna
ENSORLG00020003139	zgc:110045	90	93.151	ENSPMEG00000012762	zgc:110045	96	95.872	Poecilia_mexicana
ENSORLG00020003139	zgc:110045	100	88.915	ENSPREG00000001797	zgc:110045	95	96.744	Poecilia_reticulata
ENSORLG00020003139	zgc:110045	78	77.049	ENSPPYG00000011525	-	94	68.582	Pongo_abelii
ENSORLG00020003139	zgc:110045	84	54.911	ENSPCAG00000001454	PCBP3	98	58.529	Procavia_capensis
ENSORLG00020003139	zgc:110045	86	72.986	ENSPCOG00000013797	PCBP3	88	76.038	Propithecus_coquereli
ENSORLG00020003139	zgc:110045	86	67.249	ENSPVAG00000000832	PCBP3	73	76.471	Pteropus_vampyrus
ENSORLG00020003139	zgc:110045	60	85.204	ENSPNYG00000004656	-	98	83.163	Pundamilia_nyererei
ENSORLG00020003139	zgc:110045	90	96.226	ENSPNYG00000004637	zgc:110045	100	96.226	Pundamilia_nyererei
ENSORLG00020003139	zgc:110045	89	76.959	ENSPNAG00000004501	zgc:110045	97	79.724	Pygocentrus_nattereri
ENSORLG00020003139	zgc:110045	86	73.460	ENSRROG00000034567	PCBP3	88	76.358	Rhinopithecus_roxellana
ENSORLG00020003139	zgc:110045	86	73.460	ENSSBOG00000005789	PCBP3	88	76.358	Saimiri_boliviensis_boliviensis
ENSORLG00020003139	zgc:110045	100	92.166	ENSSMAG00000013541	zgc:110045	100	91.475	Scophthalmus_maximus
ENSORLG00020003139	zgc:110045	97	91.304	ENSSDUG00000019371	zgc:110045	100	90.435	Seriola_dumerili
ENSORLG00020003139	zgc:110045	100	93.088	ENSSLDG00000021064	zgc:110045	100	92.396	Seriola_lalandi_dorsalis
ENSORLG00020003139	zgc:110045	58	79.562	ENSSARG00000007629	-	100	62.136	Sorex_araneus
ENSORLG00020003139	zgc:110045	100	84.462	ENSSPAG00000000563	zgc:110045	97	96.203	Stegastes_partitus
ENSORLG00020003139	zgc:110045	86	73.460	ENSSSCG00000023041	PCBP3	88	76.358	Sus_scrofa
ENSORLG00020003139	zgc:110045	81	88.945	ENSTRUG00000017789	zgc:110045	98	92.965	Takifugu_rubripes
ENSORLG00020003139	zgc:110045	76	83.684	ENSTNIG00000003546	zgc:110045	94	86.842	Tetraodon_nigroviridis
ENSORLG00020003139	zgc:110045	86	56.398	ENSTBEG00000011882	-	73	58.650	Tupaia_belangeri
ENSORLG00020003139	zgc:110045	86	76.355	ENSUAMG00000006491	PCBP3	96	75.362	Ursus_americanus
ENSORLG00020003139	zgc:110045	79	73.196	ENSUMAG00000025403	PCBP3	88	63.717	Ursus_maritimus
ENSORLG00020003139	zgc:110045	86	71.569	ENSVVUG00000023862	PCBP3	97	64.955	Vulpes_vulpes
ENSORLG00020003139	zgc:110045	69	97.546	ENSXCOG00000005968	zgc:110045	87	97.546	Xiphophorus_couchianus
ENSORLG00020003139	zgc:110045	100	89.631	ENSXMAG00000008030	zgc:110045	100	88.940	Xiphophorus_maculatus