EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020003281 (Gene tree)
Gene ID: -
Gene Symbol: srsf5
Alias: -
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 5893 bases
Position: chr22:999480-1005372
Accession: 101161448
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020002528	RRM_1	PF00076.22	1.3e-32	1	2
ENSORLP00020002528	RRM_1	PF00076.22	1.3e-32	2	2
ENSORLP00020022803	RRM_1	PF00076.22	1.8e-32	1	2
ENSORLP00020022803	RRM_1	PF00076.22	1.8e-32	2	2
ENSORLP00020022803	RRM_3	PF08777.11	2.2e-07	1	1
ENSORLP00020002528	RRM_3	PF08777.11	3.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020011159	-	2888	-	ENSORLP00020022803	296 (aa)	-	-
ENSORLT00020011165	-	1011	-	ENSORLP00020002528	272 (aa)	XP_004082127	H2LZQ0

Gene Model

Click here to download ENSORLG00020003281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020003281's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020003281	srsf5	94	50.758	ENSORLG00020016052	srsf4	96	51.685
ENSORLG00020003281	srsf5	67	40.625	ENSORLG00020017678	srsf9	74	43.750
ENSORLG00020003281	srsf5	56	55.263	ENSORLG00020017506	srsf6a	89	54.305
ENSORLG00020003281	srsf5	62	41.954	ENSORLG00020009456	srsf1a	71	43.103

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020003281	srsf5	100	78.716	ENSAPOG00000017395	srsf5a	78	78.448	Acanthochromis_polyacanthus
ENSORLG00020003281	srsf5	84	79.828	ENSACIG00000011892	srsf5a	98	80.292	Amphilophus_citrinellus
ENSORLG00020003281	srsf5	83	82.553	ENSAOCG00000014967	srsf5a	80	82.540	Amphiprion_ocellaris
ENSORLG00020003281	srsf5	83	82.553	ENSAPEG00000009297	srsf5a	80	82.540	Amphiprion_percula
ENSORLG00020003281	srsf5	92	84.291	ENSATEG00000000198	srsf5a	82	85.532	Anabas_testudineus
ENSORLG00020003281	srsf5	67	77.049	ENSAPLG00000002469	-	71	72.021	Anas_platyrhynchos
ENSORLG00020003281	srsf5	67	78.022	ENSACAG00000029015	-	69	73.057	Anolis_carolinensis
ENSORLG00020003281	srsf5	83	84.519	ENSACLG00000027166	srsf5a	80	86.192	Astatotilapia_calliptera
ENSORLG00020003281	srsf5	92	76.378	ENSAMXG00000030476	srsf5a	67	85.946	Astyanax_mexicanus
ENSORLG00020003281	srsf5	67	79.235	ENSCPBG00000021518	-	70	74.346	Chrysemys_picta_bellii
ENSORLG00020003281	srsf5	67	55.612	ENSCSAVG00000011376	-	78	57.143	Ciona_savignyi
ENSORLG00020003281	srsf5	84	84.362	ENSCSEG00000008109	srsf5a	77	75.519	Cynoglossus_semilaevis
ENSORLG00020003281	srsf5	83	81.148	ENSCVAG00000016982	srsf5a	97	80.597	Cyprinodon_variegatus
ENSORLG00020003281	srsf5	68	85.638	ENSDARG00000029818	srsf5a	100	84.211	Danio_rerio
ENSORLG00020003281	srsf5	67	79.381	ENSELUG00000020439	srsf5a	66	77.295	Esox_lucius
ENSORLG00020003281	srsf5	67	76.796	ENSFALG00000005098	-	65	72.775	Ficedula_albicollis
ENSORLG00020003281	srsf5	85	80.233	ENSFHEG00000003955	srsf5a	97	77.241	Fundulus_heteroclitus
ENSORLG00020003281	srsf5	67	87.912	ENSGMOG00000000869	srsf5a	96	87.500	Gadus_morhua
ENSORLG00020003281	srsf5	77	67.401	ENSGALG00000033259	SRSF5A	64	75.000	Gallus_gallus
ENSORLG00020003281	srsf5	85	75.934	ENSGAFG00000018237	srsf5a	73	76.596	Gambusia_affinis
ENSORLG00020003281	srsf5	67	91.160	ENSGACG00000011761	srsf5a	71	92.391	Gasterosteus_aculeatus
ENSORLG00020003281	srsf5	67	79.235	ENSGAGG00000007312	-	70	74.346	Gopherus_agassizii
ENSORLG00020003281	srsf5	83	84.874	ENSHBUG00000014048	srsf5a	80	86.555	Haplochromis_burtoni
ENSORLG00020003281	srsf5	67	86.559	ENSHCOG00000017557	srsf5a	62	88.830	Hippocampus_comes
ENSORLG00020003281	srsf5	100	71.972	ENSIPUG00000003439	srsf5a	69	83.158	Ictalurus_punctatus
ENSORLG00020003281	srsf5	83	83.262	ENSKMAG00000014937	srsf5a	71	84.322	Kryptolebias_marmoratus
ENSORLG00020003281	srsf5	67	83.590	ENSLBEG00000017153	srsf5a	74	84.694	Labrus_bergylta
ENSORLG00020003281	srsf5	67	80.110	ENSLACG00000017874	-	72	76.562	Latimeria_chalumnae
ENSORLG00020003281	srsf5	67	84.409	ENSLOCG00000014075	srsf5a	100	69.481	Lepisosteus_oculatus
ENSORLG00020003281	srsf5	100	83.513	ENSMAMG00000000192	srsf5a	82	84.581	Mastacembelus_armatus
ENSORLG00020003281	srsf5	83	84.874	ENSMZEG00005010485	srsf5a	80	86.555	Maylandia_zebra
ENSORLG00020003281	srsf5	70	74.479	ENSMGAG00000011888	-	96	75.460	Meleagris_gallopavo
ENSORLG00020003281	srsf5	100	80.339	ENSMMOG00000009793	srsf5a	77	89.474	Mola_mola
ENSORLG00020003281	srsf5	92	71.875	ENSMALG00000021194	srsf5a	79	81.333	Monopterus_albus
ENSORLG00020003281	srsf5	83	85.232	ENSNBRG00000000771	srsf5a	80	86.920	Neolamprologus_brichardi
ENSORLG00020003281	srsf5	83	85.232	ENSONIG00000019583	srsf5a	80	86.920	Oreochromis_niloticus
ENSORLG00020003281	srsf5	100	100.000	ENSORLG00000009268	srsf5a	100	100.000	Oryzias_latipes
ENSORLG00020003281	srsf5	100	100.000	ENSORLG00015023075	srsf5	100	100.000	Oryzias_latipes_hsok
ENSORLG00020003281	srsf5	100	97.059	ENSOMEG00000000628	srsf5a	100	97.059	Oryzias_melastigma
ENSORLG00020003281	srsf5	67	85.027	ENSPKIG00000002054	srsf5a	69	84.127	Paramormyrops_kingsleyae
ENSORLG00020003281	srsf5	67	78.571	ENSPSIG00000008238	-	69	73.545	Pelodiscus_sinensis
ENSORLG00020003281	srsf5	85	64.082	ENSPMGG00000020125	srsf5a	55	80.328	Periophthalmus_magnuspinnatus
ENSORLG00020003281	srsf5	85	80.784	ENSPFOG00000022993	srsf5a	78	81.526	Poecilia_formosa
ENSORLG00020003281	srsf5	85	80.709	ENSPLAG00000005508	srsf5a	77	81.452	Poecilia_latipinna
ENSORLG00020003281	srsf5	85	81.176	ENSPMEG00000016339	srsf5a	78	81.928	Poecilia_mexicana
ENSORLG00020003281	srsf5	85	80.469	ENSPREG00000018091	srsf5a	93	73.203	Poecilia_reticulata
ENSORLG00020003281	srsf5	83	84.874	ENSPNYG00000021245	srsf5a	80	86.555	Pundamilia_nyererei
ENSORLG00020003281	srsf5	67	85.870	ENSPNAG00000021333	srsf5a	67	85.027	Pygocentrus_nattereri
ENSORLG00020003281	srsf5	67	85.027	ENSSFOG00015008377	srsf5	86	78.049	Scleropages_formosus
ENSORLG00020003281	srsf5	100	77.377	ENSSMAG00000010899	srsf5a	83	79.447	Scophthalmus_maximus
ENSORLG00020003281	srsf5	92	80.916	ENSSDUG00000006103	srsf5a	80	77.826	Seriola_dumerili
ENSORLG00020003281	srsf5	100	80.345	ENSSLDG00000004146	srsf5a	79	78.261	Seriola_lalandi_dorsalis
ENSORLG00020003281	srsf5	67	75.275	ENSSPUG00000002052	-	70	74.595	Sphenodon_punctatus
ENSORLG00020003281	srsf5	83	84.416	ENSSPAG00000002821	srsf5a	80	85.714	Stegastes_partitus
ENSORLG00020003281	srsf5	61	77.348	ENSTGUG00000011492	-	69	76.087	Taeniopygia_guttata
ENSORLG00020003281	srsf5	100	79.730	ENSTRUG00000022908	srsf5a	81	73.750	Takifugu_rubripes
ENSORLG00020003281	srsf5	67	77.368	ENSXETG00000017937	srsf5a	72	77.487	Xenopus_tropicalis
ENSORLG00020003281	srsf5	85	82.377	ENSXCOG00000015338	srsf5a	78	81.633	Xiphophorus_couchianus
ENSORLG00020003281	srsf5	85	81.569	ENSXMAG00000012823	srsf5a	93	77.288	Xiphophorus_maculatus