EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020003290 (Gene tree)
Gene ID: -
Gene Symbol: ddx1
Alias: -
Full Name: DEAD (Asp-Glu-Ala-Asp) box helicase 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 6412 bases
Position: chr24:13504324-13510735
Accession: ZDB-GENE-041001-215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020002525	DEAD	PF00270.29	1.4e-73	1	1
ENSORLP00020002546	DEAD	PF00270.29	1.5e-73	1	1
ENSORLP00020022785	DEAD	PF00270.29	1.5e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020011163	-	3349	-	ENSORLP00020002525	734 (aa)	-	-
ENSORLT00020011128	-	3434	-	ENSORLP00020002546	711 (aa)	-	-
ENSORLT00020011211	-	3326	-	ENSORLP00020022785	717 (aa)	-	-

Gene Model

Click here to download ENSORLG00020003290's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020003290's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020003290	ddx1	55	50.000	ENSORLG00020005546	ddx47	85	50.000
ENSORLG00020003290	ddx1	59	45.098	ENSORLG00020015515	-	69	45.098
ENSORLG00020003290	ddx1	59	45.098	ENSORLG00020016534	ddx6	70	45.098

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020003290	ddx1	100	84.605	ENSG00000079785	DDX1	99	84.605	Homo_sapiens
ENSORLG00020003290	ddx1	100	91.281	ENSAPOG00000003166	ddx1	100	91.281	Acanthochromis_polyacanthus
ENSORLG00020003290	ddx1	100	83.832	ENSAMEG00000001071	DDX1	99	83.832	Ailuropoda_melanoleuca
ENSORLG00020003290	ddx1	89	89.924	ENSACIG00000017422	ddx1	99	90.687	Amphilophus_citrinellus
ENSORLG00020003290	ddx1	92	90.426	ENSAOCG00000015436	ddx1	94	91.824	Amphiprion_ocellaris
ENSORLG00020003290	ddx1	100	92.371	ENSAPEG00000007699	ddx1	100	92.371	Amphiprion_percula
ENSORLG00020003290	ddx1	97	92.837	ENSATEG00000003965	ddx1	98	92.214	Anabas_testudineus
ENSORLG00020003290	ddx1	100	84.959	ENSAPLG00000011093	DDX1	99	84.959	Anas_platyrhynchos
ENSORLG00020003290	ddx1	97	84.549	ENSACAG00000011036	DDX1	100	84.549	Anolis_carolinensis
ENSORLG00020003290	ddx1	100	84.469	ENSANAG00000037912	DDX1	99	84.469	Aotus_nancymaae
ENSORLG00020003290	ddx1	100	92.507	ENSACLG00000008850	ddx1	99	91.450	Astatotilapia_calliptera
ENSORLG00020003290	ddx1	100	89.101	ENSAMXG00000002100	ddx1	99	89.101	Astyanax_mexicanus
ENSORLG00020003290	ddx1	100	84.605	ENSBTAG00000009906	DDX1	99	84.605	Bos_taurus
ENSORLG00020003290	ddx1	99	47.133	WBGene00021938	Y55F3BR.1	98	46.849	Caenorhabditis_elegans
ENSORLG00020003290	ddx1	100	84.469	ENSCJAG00000007076	DDX1	99	84.469	Callithrix_jacchus
ENSORLG00020003290	ddx1	100	84.196	ENSCAFG00000003686	DDX1	99	84.196	Canis_familiaris
ENSORLG00020003290	ddx1	100	84.196	ENSCAFG00020026083	DDX1	99	84.196	Canis_lupus_dingo
ENSORLG00020003290	ddx1	100	84.741	ENSCHIG00000011046	DDX1	99	84.741	Capra_hircus
ENSORLG00020003290	ddx1	100	84.469	ENSTSYG00000002477	-	99	84.469	Carlito_syrichta
ENSORLG00020003290	ddx1	99	60.380	ENSTSYG00000037396	-	97	62.519	Carlito_syrichta
ENSORLG00020003290	ddx1	87	68.955	ENSCAPG00000008906	-	93	68.955	Cavia_aperea
ENSORLG00020003290	ddx1	70	83.865	ENSCPOG00000032467	-	100	83.865	Cavia_porcellus
ENSORLG00020003290	ddx1	88	82.236	ENSCPOG00000009816	-	96	82.236	Cavia_porcellus
ENSORLG00020003290	ddx1	100	84.469	ENSCCAG00000030085	DDX1	100	83.644	Cebus_capucinus
ENSORLG00020003290	ddx1	100	84.332	ENSCATG00000033924	DDX1	99	84.332	Cercocebus_atys
ENSORLG00020003290	ddx1	100	84.605	ENSCLAG00000005434	DDX1	99	84.605	Chinchilla_lanigera
ENSORLG00020003290	ddx1	100	84.332	ENSCSAG00000007883	DDX1	99	84.332	Chlorocebus_sabaeus
ENSORLG00020003290	ddx1	70	88.124	ENSCHOG00000002171	DDX1	70	88.124	Choloepus_hoffmanni
ENSORLG00020003290	ddx1	100	78.776	ENSCPBG00000013330	DDX1	99	83.762	Chrysemys_picta_bellii
ENSORLG00020003290	ddx1	100	65.676	ENSCING00000001176	-	99	65.680	Ciona_intestinalis
ENSORLG00020003290	ddx1	99	61.401	ENSCSAVG00000003028	-	99	61.538	Ciona_savignyi
ENSORLG00020003290	ddx1	100	84.332	ENSCANG00000031530	DDX1	99	84.332	Colobus_angolensis_palliatus
ENSORLG00020003290	ddx1	100	84.196	ENSCGRG00001013025	Ddx1	99	84.196	Cricetulus_griseus_chok1gshd
ENSORLG00020003290	ddx1	100	84.196	ENSCGRG00000000676	Ddx1	99	84.196	Cricetulus_griseus_crigri
ENSORLG00020003290	ddx1	100	91.689	ENSCSEG00000002630	ddx1	100	91.689	Cynoglossus_semilaevis
ENSORLG00020003290	ddx1	100	91.281	ENSCVAG00000020927	ddx1	100	91.281	Cyprinodon_variegatus
ENSORLG00020003290	ddx1	100	87.602	ENSDARG00000032117	ddx1	100	87.602	Danio_rerio
ENSORLG00020003290	ddx1	100	84.469	ENSDNOG00000006905	DDX1	99	84.469	Dasypus_novemcinctus
ENSORLG00020003290	ddx1	100	84.332	ENSDORG00000012847	Ddx1	99	84.332	Dipodomys_ordii
ENSORLG00020003290	ddx1	98	59.172	FBgn0015075	Ddx1	98	59.586	Drosophila_melanogaster
ENSORLG00020003290	ddx1	100	76.158	ENSETEG00000014259	DDX1	99	76.158	Echinops_telfairi
ENSORLG00020003290	ddx1	64	77.331	ENSEBUG00000009800	-	99	77.331	Eptatretus_burgeri
ENSORLG00020003290	ddx1	100	84.741	ENSEASG00005009335	DDX1	91	84.741	Equus_asinus_asinus
ENSORLG00020003290	ddx1	95	83.788	ENSECAG00000016396	DDX1	100	83.788	Equus_caballus
ENSORLG00020003290	ddx1	89	82.830	ENSEEUG00000001606	DDX1	89	82.830	Erinaceus_europaeus
ENSORLG00020003290	ddx1	100	86.531	ENSELUG00000006743	ddx1	100	86.531	Esox_lucius
ENSORLG00020003290	ddx1	100	84.332	ENSFCAG00000004680	DDX1	99	84.332	Felis_catus
ENSORLG00020003290	ddx1	100	85.422	ENSFALG00000008696	DDX1	99	85.422	Ficedula_albicollis
ENSORLG00020003290	ddx1	100	83.787	ENSFDAG00000021305	DDX1	99	83.787	Fukomys_damarensis
ENSORLG00020003290	ddx1	100	92.098	ENSFHEG00000008444	ddx1	100	92.098	Fundulus_heteroclitus
ENSORLG00020003290	ddx1	100	85.753	ENSGMOG00000011300	ddx1	99	85.753	Gadus_morhua
ENSORLG00020003290	ddx1	100	85.150	ENSGALG00000016461	DDX1	99	85.150	Gallus_gallus
ENSORLG00020003290	ddx1	100	92.098	ENSGAFG00000004706	ddx1	99	92.098	Gambusia_affinis
ENSORLG00020003290	ddx1	100	88.556	ENSGACG00000011162	ddx1	99	88.556	Gasterosteus_aculeatus
ENSORLG00020003290	ddx1	100	84.332	ENSGAGG00000021020	DDX1	99	84.332	Gopherus_agassizii
ENSORLG00020003290	ddx1	100	84.605	ENSGGOG00000012482	DDX1	99	84.605	Gorilla_gorilla
ENSORLG00020003290	ddx1	100	92.643	ENSHBUG00000014069	ddx1	99	92.643	Haplochromis_burtoni
ENSORLG00020003290	ddx1	100	83.787	ENSHGLG00000000801	DDX1	99	83.787	Heterocephalus_glaber_female
ENSORLG00020003290	ddx1	100	83.787	ENSHGLG00100000711	DDX1	100	83.787	Heterocephalus_glaber_male
ENSORLG00020003290	ddx1	100	90.054	ENSHCOG00000011492	ddx1	95	90.054	Hippocampus_comes
ENSORLG00020003290	ddx1	100	87.466	ENSIPUG00000003494	ddx1	99	87.466	Ictalurus_punctatus
ENSORLG00020003290	ddx1	100	84.469	ENSSTOG00000003977	DDX1	100	84.469	Ictidomys_tridecemlineatus
ENSORLG00020003290	ddx1	89	79.389	ENSJJAG00000013315	Ddx1	100	79.389	Jaculus_jaculus
ENSORLG00020003290	ddx1	100	92.779	ENSKMAG00000011340	ddx1	99	92.779	Kryptolebias_marmoratus
ENSORLG00020003290	ddx1	89	85.802	ENSLBEG00000008692	ddx1	99	85.802	Labrus_bergylta
ENSORLG00020003290	ddx1	100	83.379	ENSLACG00000010529	DDX1	99	83.379	Latimeria_chalumnae
ENSORLG00020003290	ddx1	100	87.075	ENSLOCG00000016473	ddx1	99	87.075	Lepisosteus_oculatus
ENSORLG00020003290	ddx1	100	84.469	ENSLAFG00000002213	DDX1	99	84.469	Loxodonta_africana
ENSORLG00020003290	ddx1	100	84.332	ENSMFAG00000033987	DDX1	99	84.332	Macaca_fascicularis
ENSORLG00020003290	ddx1	100	84.332	ENSMMUG00000023437	DDX1	99	84.332	Macaca_mulatta
ENSORLG00020003290	ddx1	100	84.332	ENSMNEG00000029189	DDX1	99	84.332	Macaca_nemestrina
ENSORLG00020003290	ddx1	100	84.196	ENSMLEG00000030787	DDX1	99	84.196	Mandrillus_leucophaeus
ENSORLG00020003290	ddx1	100	92.643	ENSMAMG00000015916	ddx1	99	92.643	Mastacembelus_armatus
ENSORLG00020003290	ddx1	100	92.507	ENSMZEG00005015207	ddx1	99	91.450	Maylandia_zebra
ENSORLG00020003290	ddx1	100	81.547	ENSMGAG00000014025	DDX1	100	81.547	Meleagris_gallopavo
ENSORLG00020003290	ddx1	64	97.959	ENSMAUG00000016156	Ddx1	99	97.959	Mesocricetus_auratus
ENSORLG00020003290	ddx1	100	84.332	ENSMICG00000001023	DDX1	99	84.332	Microcebus_murinus
ENSORLG00020003290	ddx1	100	84.196	ENSMOCG00000000257	Ddx1	99	84.196	Microtus_ochrogaster
ENSORLG00020003290	ddx1	89	89.924	ENSMMOG00000015397	ddx1	99	89.924	Mola_mola
ENSORLG00020003290	ddx1	100	85.014	ENSMODG00000010275	DDX1	99	85.014	Monodelphis_domestica
ENSORLG00020003290	ddx1	100	91.826	ENSMALG00000016409	ddx1	99	91.826	Monopterus_albus
ENSORLG00020003290	ddx1	100	84.332	MGP_CAROLIEiJ_G0017622	Ddx1	99	84.332	Mus_caroli
ENSORLG00020003290	ddx1	100	84.332	ENSMUSG00000037149	Ddx1	99	84.332	Mus_musculus
ENSORLG00020003290	ddx1	100	84.469	MGP_PahariEiJ_G0029378	Ddx1	99	84.469	Mus_pahari
ENSORLG00020003290	ddx1	100	84.332	MGP_SPRETEiJ_G0018464	Ddx1	99	84.332	Mus_spretus
ENSORLG00020003290	ddx1	100	84.332	ENSMPUG00000013606	DDX1	99	84.332	Mustela_putorius_furo
ENSORLG00020003290	ddx1	100	83.924	ENSMLUG00000003027	DDX1	98	83.924	Myotis_lucifugus
ENSORLG00020003290	ddx1	100	84.196	ENSNGAG00000015783	Ddx1	100	84.196	Nannospalax_galili
ENSORLG00020003290	ddx1	81	88.428	ENSNBRG00000020677	ddx1	94	88.428	Neolamprologus_brichardi
ENSORLG00020003290	ddx1	100	84.605	ENSNLEG00000014417	DDX1	99	84.605	Nomascus_leucogenys
ENSORLG00020003290	ddx1	99	83.037	ENSMEUG00000008254	DDX1	99	83.037	Notamacropus_eugenii
ENSORLG00020003290	ddx1	100	60.899	ENSOPRG00000004290	DDX1	99	60.899	Ochotona_princeps
ENSORLG00020003290	ddx1	100	84.605	ENSODEG00000000569	DDX1	99	84.605	Octodon_degus
ENSORLG00020003290	ddx1	100	92.517	ENSONIG00000000513	ddx1	99	92.517	Oreochromis_niloticus
ENSORLG00020003290	ddx1	78	82.616	ENSOANG00000005450	DDX1	99	82.616	Ornithorhynchus_anatinus
ENSORLG00020003290	ddx1	100	84.605	ENSOCUG00000007010	DDX1	99	84.605	Oryctolagus_cuniculus
ENSORLG00020003290	ddx1	100	99.864	ENSORLG00000016709	ddx1	99	99.864	Oryzias_latipes
ENSORLG00020003290	ddx1	100	99.591	ENSORLG00015022438	ddx1	100	99.591	Oryzias_latipes_hsok
ENSORLG00020003290	ddx1	100	91.962	ENSOMEG00000017620	ddx1	99	91.962	Oryzias_melastigma
ENSORLG00020003290	ddx1	100	84.511	ENSOGAG00000008730	DDX1	100	84.511	Otolemur_garnettii
ENSORLG00020003290	ddx1	100	84.511	ENSOARG00000016369	DDX1	100	84.511	Ovis_aries
ENSORLG00020003290	ddx1	100	84.469	ENSPPAG00000027432	DDX1	99	84.469	Pan_paniscus
ENSORLG00020003290	ddx1	100	84.332	ENSPPRG00000020556	DDX1	99	84.332	Panthera_pardus
ENSORLG00020003290	ddx1	100	84.196	ENSPTIG00000008267	DDX1	99	84.196	Panthera_tigris_altaica
ENSORLG00020003290	ddx1	100	84.469	ENSPTRG00000011670	DDX1	99	84.469	Pan_troglodytes
ENSORLG00020003290	ddx1	100	84.332	ENSPANG00000025185	DDX1	99	84.332	Papio_anubis
ENSORLG00020003290	ddx1	100	85.150	ENSPKIG00000012466	ddx1	100	85.150	Paramormyrops_kingsleyae
ENSORLG00020003290	ddx1	56	82.382	ENSPSIG00000012292	DDX1	100	82.382	Pelodiscus_sinensis
ENSORLG00020003290	ddx1	100	89.782	ENSPMGG00000000782	ddx1	99	89.782	Periophthalmus_magnuspinnatus
ENSORLG00020003290	ddx1	100	84.332	ENSPEMG00000016389	Ddx1	99	84.332	Peromyscus_maniculatus_bairdii
ENSORLG00020003290	ddx1	100	77.989	ENSPMAG00000009118	-	100	77.989	Petromyzon_marinus
ENSORLG00020003290	ddx1	100	85.695	ENSPCIG00000010941	DDX1	99	85.695	Phascolarctos_cinereus
ENSORLG00020003290	ddx1	87	90.980	ENSPFOG00000006873	-	100	90.980	Poecilia_formosa
ENSORLG00020003290	ddx1	100	92.234	ENSPFOG00000011921	ddx1	99	92.234	Poecilia_formosa
ENSORLG00020003290	ddx1	100	91.962	ENSPLAG00000005939	ddx1	99	91.962	Poecilia_latipinna
ENSORLG00020003290	ddx1	100	92.234	ENSPMEG00000011140	ddx1	99	92.234	Poecilia_mexicana
ENSORLG00020003290	ddx1	100	92.234	ENSPREG00000011751	ddx1	99	92.234	Poecilia_reticulata
ENSORLG00020003290	ddx1	100	84.605	ENSPPYG00000012638	DDX1	99	84.605	Pongo_abelii
ENSORLG00020003290	ddx1	100	71.935	ENSPCAG00000001491	DDX1	99	71.935	Procavia_capensis
ENSORLG00020003290	ddx1	100	82.561	ENSPCOG00000028185	DDX1	99	82.561	Propithecus_coquereli
ENSORLG00020003290	ddx1	100	84.196	ENSPVAG00000013618	DDX1	99	84.196	Pteropus_vampyrus
ENSORLG00020003290	ddx1	100	92.371	ENSPNYG00000013839	ddx1	100	91.966	Pundamilia_nyererei
ENSORLG00020003290	ddx1	89	88.550	ENSPNAG00000017033	ddx1	97	88.550	Pygocentrus_nattereri
ENSORLG00020003290	ddx1	100	84.605	ENSRNOG00000006652	Ddx1	99	84.605	Rattus_norvegicus
ENSORLG00020003290	ddx1	100	83.243	ENSRBIG00000041664	DDX1	100	83.840	Rhinopithecus_bieti
ENSORLG00020003290	ddx1	100	83.924	ENSRROG00000031167	DDX1	99	83.924	Rhinopithecus_roxellana
ENSORLG00020003290	ddx1	100	84.605	ENSSBOG00000027577	DDX1	99	84.605	Saimiri_boliviensis_boliviensis
ENSORLG00020003290	ddx1	100	77.929	ENSSHAG00000009363	DDX1	99	77.929	Sarcophilus_harrisii
ENSORLG00020003290	ddx1	100	84.877	ENSSFOG00015014476	ddx1	99	84.877	Scleropages_formosus
ENSORLG00020003290	ddx1	100	90.191	ENSSMAG00000010094	ddx1	99	90.191	Scophthalmus_maximus
ENSORLG00020003290	ddx1	100	91.281	ENSSDUG00000012334	ddx1	99	91.281	Seriola_dumerili
ENSORLG00020003290	ddx1	100	90.736	ENSSLDG00000025345	ddx1	99	90.736	Seriola_lalandi_dorsalis
ENSORLG00020003290	ddx1	100	75.886	ENSSARG00000004536	DDX1	92	83.663	Sorex_araneus
ENSORLG00020003290	ddx1	100	83.651	ENSSPUG00000018835	DDX1	99	83.651	Sphenodon_punctatus
ENSORLG00020003290	ddx1	100	86.240	ENSSPAG00000023554	ddx1	99	86.240	Stegastes_partitus
ENSORLG00020003290	ddx1	100	84.196	ENSSSCG00000008619	DDX1	99	84.196	Sus_scrofa
ENSORLG00020003290	ddx1	100	85.422	ENSTGUG00000013096	DDX1	99	85.422	Taeniopygia_guttata
ENSORLG00020003290	ddx1	100	90.872	ENSTRUG00000015765	ddx1	99	90.872	Takifugu_rubripes
ENSORLG00020003290	ddx1	100	91.826	ENSTNIG00000016309	ddx1	99	91.826	Tetraodon_nigroviridis
ENSORLG00020003290	ddx1	100	81.335	ENSTBEG00000008454	DDX1	100	81.335	Tupaia_belangeri
ENSORLG00020003290	ddx1	100	84.196	ENSTTRG00000005081	DDX1	99	84.196	Tursiops_truncatus
ENSORLG00020003290	ddx1	65	78.465	ENSUAMG00000017375	DDX1	87	78.252	Ursus_americanus
ENSORLG00020003290	ddx1	100	84.196	ENSUMAG00000023450	DDX1	100	84.196	Ursus_maritimus
ENSORLG00020003290	ddx1	85	87.411	ENSVPAG00000007764	DDX1	84	87.411	Vicugna_pacos
ENSORLG00020003290	ddx1	100	84.196	ENSVVUG00000013085	DDX1	96	84.196	Vulpes_vulpes
ENSORLG00020003290	ddx1	100	84.877	ENSXETG00000017825	ddx1	99	84.877	Xenopus_tropicalis
ENSORLG00020003290	ddx1	100	89.069	ENSXCOG00000007082	ddx1	99	89.069	Xiphophorus_couchianus
ENSORLG00020003290	ddx1	100	91.826	ENSXMAG00000004555	ddx1	99	91.826	Xiphophorus_maculatus