EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020003354 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 11959 bases
Position: chr23:22463236-22475194
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020022848	MMR_HSR1	PF01926.23	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020011047	-	471	-	ENSORLP00020002593	156 (aa)	-	-
ENSORLT00020011049	-	1216	-	ENSORLP00020022848	170 (aa)	-	-

Gene Model

Click here to download ENSORLG00020003354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020003354's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020003354	-	68	33.621	ENSORLG00020007248	arl15a	57	33.621
ENSORLG00020003354	-	89	46.358	ENSORLG00020009947	arl8	84	46.358
ENSORLG00020003354	-	88	34.000	ENSORLG00020021398	arl8ba	81	34.000
ENSORLG00020003354	-	89	82.895	ENSORLG00020005379	arf3b	84	82.895
ENSORLG00020003354	-	89	82.895	ENSORLG00020007477	-	84	82.895
ENSORLG00020003354	-	81	46.479	ENSORLG00020011342	arl4aa	75	46.479
ENSORLG00020003354	-	88	34.667	ENSORLG00020002055	arl8bb	81	34.667
ENSORLG00020003354	-	89	61.589	ENSORLG00020005754	arl1	83	61.589
ENSORLG00020003354	-	84	30.282	ENSORLG00020021985	sar1b	72	30.282
ENSORLG00020003354	-	89	90.789	ENSORLG00020001755	-	84	90.789
ENSORLG00020003354	-	91	45.625	ENSORLG00020007137	arl4cb	80	45.625
ENSORLG00020003354	-	77	44.697	ENSORLG00020008107	arl11	76	44.697
ENSORLG00020003354	-	89	84.868	ENSORLG00020000480	-	84	84.868
ENSORLG00020003354	-	88	32.237	ENSORLG00020007024	-	71	31.818
ENSORLG00020003354	-	88	83.893	ENSORLG00020006712	-	83	83.893
ENSORLG00020003354	-	79	48.148	ENSORLG00020019239	-	74	48.148
ENSORLG00020003354	-	80	42.143	ENSORLG00020014120	arl14	76	42.143
ENSORLG00020003354	-	89	43.046	ENSORLG00020010074	arl5c	91	43.046
ENSORLG00020003354	-	84	85.915	ENSORLG00020007962	-	82	85.915
ENSORLG00020003354	-	79	38.356	ENSORLG00020004500	arfrp1	71	38.356
ENSORLG00020003354	-	78	33.333	ENSORLG00020005458	sar1ab	67	33.083
ENSORLG00020003354	-	81	36.170	ENSORLG00020003428	-	57	36.170
ENSORLG00020003354	-	89	45.695	ENSORLG00020017337	ARL5A	84	45.695
ENSORLG00020003354	-	84	44.755	ENSORLG00020002949	arl3	82	44.755
ENSORLG00020003354	-	85	37.500	ENSORLG00020015550	ARL6	84	37.500
ENSORLG00020003354	-	55	52.128	ENSORLG00020012167	arl2	65	49.515
ENSORLG00020003354	-	88	32.000	ENSORLG00020004126	arl8a	80	32.000
ENSORLG00020003354	-	84	48.322	ENSORLG00020011692	-	76	47.973
ENSORLG00020003354	-	85	45.578	ENSORLG00020012894	arl3l2	79	45.578

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020003354	-	90	91.503	ENSCAFG00000001726	ARF5	84	91.447	Canis_familiaris
ENSORLG00020003354	-	91	94.156	ENSELUG00000019582	-	84	94.702	Esox_lucius
ENSORLG00020003354	-	89	91.447	ENSGALG00000043476	-	100	91.447	Gallus_gallus
ENSORLG00020003354	-	94	96.855	ENSKMAG00000008864	-	94	96.855	Kryptolebias_marmoratus
ENSORLG00020003354	-	90	77.778	ENSLACG00000012168	-	97	77.778	Latimeria_chalumnae
ENSORLG00020003354	-	78	91.667	ENSMGAG00000008562	-	100	91.667	Meleagris_gallopavo
ENSORLG00020003354	-	99	98.810	ENSORLG00015002471	-	84	98.810	Oryzias_latipes_hsok
ENSORLG00020003354	-	78	79.259	ENSPMAG00000005571	-	100	79.259	Petromyzon_marinus
ENSORLG00020003354	-	91	92.857	ENSSDUG00000014675	-	85	92.857	Seriola_dumerili
ENSORLG00020003354	-	65	96.396	ENSSLDG00000005491	-	98	96.396	Seriola_lalandi_dorsalis
ENSORLG00020003354	-	91	91.558	ENSSPUG00000004465	-	86	91.558	Sphenodon_punctatus
ENSORLG00020003354	-	89	88.816	ENSTBEG00000007415	-	100	88.816	Tupaia_belangeri