EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020003362 (Gene tree)
Gene ID: -
Gene Symbol: gfm1
Alias: -
Full Name: G elongation factor%2C mitochondrial 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 14759 bases
Position: chr13:12831016-12845774
Accession: ZDB-GENE-061013-79
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020002592	GTP_EFTU	PF00009.27	2e-62	1	1
ENSORLP00020002592	GTP_EFTU_D2	PF03144.25	1.2e-16	1	1
ENSORLP00020002592	EFG_IV	PF03764.18	1.4e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020011054	-	5772	-	ENSORLP00020002592	748 (aa)	-	-

Gene Model

Click here to download ENSORLG00020003362's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020003362's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020003362	gfm1	74	39.597	ENSORLG00020017663	eef2b	74	39.597
ENSORLG00020003362	gfm1	94	31.620	ENSORLG00020011110	gfm2	99	32.917
ENSORLG00020003362	gfm1	73	38.926	ENSORLG00020003472	-	72	38.926

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020003362	gfm1	97	80.854	ENSG00000168827	GFM1	100	93.333	Homo_sapiens
ENSORLG00020003362	gfm1	93	87.536	ENSAPOG00000016489	gfm1	99	87.536	Acanthochromis_polyacanthus
ENSORLG00020003362	gfm1	96	82.312	ENSAMEG00000013542	GFM1	95	82.312	Ailuropoda_melanoleuca
ENSORLG00020003362	gfm1	97	85.517	ENSACIG00000014465	gfm1	94	85.517	Amphilophus_citrinellus
ENSORLG00020003362	gfm1	100	88.503	ENSAOCG00000006023	gfm1	100	88.503	Amphiprion_ocellaris
ENSORLG00020003362	gfm1	100	88.369	ENSAPEG00000024499	gfm1	100	88.369	Amphiprion_percula
ENSORLG00020003362	gfm1	100	87.968	ENSATEG00000013789	gfm1	100	87.968	Anabas_testudineus
ENSORLG00020003362	gfm1	97	80.414	ENSAPLG00000005022	GFM1	100	80.414	Anas_platyrhynchos
ENSORLG00020003362	gfm1	99	79.567	ENSACAG00000006829	GFM1	100	79.567	Anolis_carolinensis
ENSORLG00020003362	gfm1	97	80.441	ENSANAG00000035983	GFM1	97	80.441	Aotus_nancymaae
ENSORLG00020003362	gfm1	100	89.973	ENSACLG00000016586	gfm1	100	89.973	Astatotilapia_calliptera
ENSORLG00020003362	gfm1	100	83.755	ENSAMXG00000013435	gfm1	97	85.615	Astyanax_mexicanus
ENSORLG00020003362	gfm1	96	81.337	ENSBTAG00000027795	GFM1	95	81.337	Bos_taurus
ENSORLG00020003362	gfm1	94	57.143	WBGene00009246	gfm-1	95	56.821	Caenorhabditis_elegans
ENSORLG00020003362	gfm1	97	80.992	ENSCJAG00000000363	GFM1	97	80.992	Callithrix_jacchus
ENSORLG00020003362	gfm1	96	82.173	ENSCAFG00000009006	GFM1	100	81.953	Canis_familiaris
ENSORLG00020003362	gfm1	96	82.173	ENSCAFG00020005878	GFM1	98	82.173	Canis_lupus_dingo
ENSORLG00020003362	gfm1	96	81.476	ENSCHIG00000015220	GFM1	95	81.476	Capra_hircus
ENSORLG00020003362	gfm1	97	81.680	ENSTSYG00000002013	GFM1	96	81.680	Carlito_syrichta
ENSORLG00020003362	gfm1	100	69.404	ENSCAPG00000005699	GFM1	100	69.404	Cavia_aperea
ENSORLG00020003362	gfm1	97	81.129	ENSCPOG00000001194	GFM1	96	81.129	Cavia_porcellus
ENSORLG00020003362	gfm1	97	80.716	ENSCCAG00000025561	GFM1	97	80.716	Cebus_capucinus
ENSORLG00020003362	gfm1	97	81.129	ENSCATG00000037622	GFM1	97	81.129	Cercocebus_atys
ENSORLG00020003362	gfm1	97	80.165	ENSCLAG00000002503	GFM1	96	80.165	Chinchilla_lanigera
ENSORLG00020003362	gfm1	97	81.267	ENSCSAG00000012162	GFM1	97	81.267	Chlorocebus_sabaeus
ENSORLG00020003362	gfm1	97	72.590	ENSCHOG00000004867	GFM1	96	72.590	Choloepus_hoffmanni
ENSORLG00020003362	gfm1	99	80.429	ENSCPBG00000018367	GFM1	99	80.429	Chrysemys_picta_bellii
ENSORLG00020003362	gfm1	94	59.414	ENSCING00000011960	-	93	59.414	Ciona_intestinalis
ENSORLG00020003362	gfm1	95	58.889	ENSCSAVG00000008514	-	99	58.889	Ciona_savignyi
ENSORLG00020003362	gfm1	97	80.992	ENSCANG00000031714	GFM1	97	80.992	Colobus_angolensis_palliatus
ENSORLG00020003362	gfm1	97	80.966	ENSCGRG00001022095	GFM1	97	80.966	Cricetulus_griseus_chok1gshd
ENSORLG00020003362	gfm1	97	80.966	ENSCGRG00000012043	GFM1	97	80.966	Cricetulus_griseus_crigri
ENSORLG00020003362	gfm1	97	82.988	ENSCSEG00000017088	gfm1	99	82.988	Cynoglossus_semilaevis
ENSORLG00020003362	gfm1	100	91.444	ENSCVAG00000004126	gfm1	100	91.444	Cyprinodon_variegatus
ENSORLG00020003362	gfm1	100	82.353	ENSDARG00000063624	gfm1	100	82.353	Danio_rerio
ENSORLG00020003362	gfm1	55	79.462	ENSDNOG00000016385	-	100	79.462	Dasypus_novemcinctus
ENSORLG00020003362	gfm1	97	80.138	ENSDORG00000014165	Gfm1	96	80.138	Dipodomys_ordii
ENSORLG00020003362	gfm1	98	66.667	FBgn0263133	mEFG1	99	66.667	Drosophila_melanogaster
ENSORLG00020003362	gfm1	96	74.064	ENSETEG00000019197	GFM1	95	74.064	Echinops_telfairi
ENSORLG00020003362	gfm1	89	63.609	ENSEBUG00000012794	gfm1	99	63.609	Eptatretus_burgeri
ENSORLG00020003362	gfm1	96	61.111	ENSEEUG00000000429	GFM1	99	61.111	Erinaceus_europaeus
ENSORLG00020003362	gfm1	100	86.364	ENSELUG00000014728	gfm1	100	86.364	Esox_lucius
ENSORLG00020003362	gfm1	97	81.818	ENSFCAG00000013291	GFM1	96	81.818	Felis_catus
ENSORLG00020003362	gfm1	90	80.889	ENSFALG00000007619	GFM1	100	80.889	Ficedula_albicollis
ENSORLG00020003362	gfm1	97	80.579	ENSFDAG00000016559	GFM1	96	80.579	Fukomys_damarensis
ENSORLG00020003362	gfm1	100	90.107	ENSFHEG00000006091	gfm1	100	90.107	Fundulus_heteroclitus
ENSORLG00020003362	gfm1	97	86.107	ENSGMOG00000010161	gfm1	100	86.107	Gadus_morhua
ENSORLG00020003362	gfm1	97	80.690	ENSGALG00000009634	GFM1	98	80.690	Gallus_gallus
ENSORLG00020003362	gfm1	100	90.775	ENSGAFG00000012527	gfm1	100	90.775	Gambusia_affinis
ENSORLG00020003362	gfm1	99	89.037	ENSGACG00000009864	gfm1	99	89.037	Gasterosteus_aculeatus
ENSORLG00020003362	gfm1	97	81.129	ENSGGOG00000003085	GFM1	97	81.129	Gorilla_gorilla
ENSORLG00020003362	gfm1	100	90.107	ENSHBUG00000002120	gfm1	100	90.107	Haplochromis_burtoni
ENSORLG00020003362	gfm1	97	80.028	ENSHGLG00000016855	GFM1	96	80.028	Heterocephalus_glaber_female
ENSORLG00020003362	gfm1	97	80.028	ENSHGLG00100013049	GFM1	96	80.028	Heterocephalus_glaber_male
ENSORLG00020003362	gfm1	100	88.235	ENSHCOG00000007638	gfm1	100	88.235	Hippocampus_comes
ENSORLG00020003362	gfm1	100	84.626	ENSIPUG00000005873	gfm1	100	84.626	Ictalurus_punctatus
ENSORLG00020003362	gfm1	97	78.926	ENSSTOG00000010150	GFM1	98	78.926	Ictidomys_tridecemlineatus
ENSORLG00020003362	gfm1	97	80.552	ENSJJAG00000016447	Gfm1	97	80.552	Jaculus_jaculus
ENSORLG00020003362	gfm1	100	87.433	ENSKMAG00000020768	gfm1	100	87.433	Kryptolebias_marmoratus
ENSORLG00020003362	gfm1	94	90.157	ENSLBEG00000021315	gfm1	100	90.157	Labrus_bergylta
ENSORLG00020003362	gfm1	100	79.011	ENSLACG00000012295	GFM1	100	79.011	Latimeria_chalumnae
ENSORLG00020003362	gfm1	97	79.098	ENSLOCG00000003778	gfm1	100	79.098	Lepisosteus_oculatus
ENSORLG00020003362	gfm1	99	77.303	ENSLAFG00000010945	GFM1	99	78.194	Loxodonta_africana
ENSORLG00020003362	gfm1	97	81.129	ENSMFAG00000035731	GFM1	97	81.129	Macaca_fascicularis
ENSORLG00020003362	gfm1	97	81.129	ENSMMUG00000004961	GFM1	97	81.129	Macaca_mulatta
ENSORLG00020003362	gfm1	97	80.992	ENSMNEG00000033245	GFM1	97	80.992	Macaca_nemestrina
ENSORLG00020003362	gfm1	97	79.310	ENSMLEG00000030908	GFM1	99	79.189	Mandrillus_leucophaeus
ENSORLG00020003362	gfm1	100	88.503	ENSMAMG00000011760	gfm1	100	88.503	Mastacembelus_armatus
ENSORLG00020003362	gfm1	100	90.107	ENSMZEG00005016639	gfm1	100	90.107	Maylandia_zebra
ENSORLG00020003362	gfm1	97	80.939	ENSMGAG00000010641	GFM1	97	80.939	Meleagris_gallopavo
ENSORLG00020003362	gfm1	97	81.241	ENSMAUG00000000611	Gfm1	97	81.241	Mesocricetus_auratus
ENSORLG00020003362	gfm1	97	81.405	ENSMICG00000049086	GFM1	96	81.405	Microcebus_murinus
ENSORLG00020003362	gfm1	96	81.919	ENSMOCG00000000465	Gfm1	96	81.919	Microtus_ochrogaster
ENSORLG00020003362	gfm1	97	89.118	ENSMMOG00000012538	gfm1	98	89.118	Mola_mola
ENSORLG00020003362	gfm1	97	80.552	ENSMODG00000015673	GFM1	98	80.552	Monodelphis_domestica
ENSORLG00020003362	gfm1	96	88.145	ENSMALG00000012508	gfm1	95	88.145	Monopterus_albus
ENSORLG00020003362	gfm1	96	81.590	MGP_CAROLIEiJ_G0025052	Gfm1	95	81.590	Mus_caroli
ENSORLG00020003362	gfm1	96	81.450	ENSMUSG00000027774	Gfm1	95	81.450	Mus_musculus
ENSORLG00020003362	gfm1	97	80.414	MGP_PahariEiJ_G0026495	Gfm1	97	80.414	Mus_pahari
ENSORLG00020003362	gfm1	96	81.450	MGP_SPRETEiJ_G0025994	Gfm1	95	81.450	Mus_spretus
ENSORLG00020003362	gfm1	98	81.199	ENSMPUG00000002859	GFM1	97	81.199	Mustela_putorius_furo
ENSORLG00020003362	gfm1	97	81.680	ENSMLUG00000000452	GFM1	96	81.680	Myotis_lucifugus
ENSORLG00020003362	gfm1	97	80.828	ENSNGAG00000012375	Gfm1	97	80.828	Nannospalax_galili
ENSORLG00020003362	gfm1	97	90.522	ENSNBRG00000004631	gfm1	99	90.522	Neolamprologus_brichardi
ENSORLG00020003362	gfm1	97	81.129	ENSNLEG00000004176	GFM1	97	81.129	Nomascus_leucogenys
ENSORLG00020003362	gfm1	91	72.206	ENSMEUG00000007784	GFM1	99	72.206	Notamacropus_eugenii
ENSORLG00020003362	gfm1	98	80.355	ENSOPRG00000009860	GFM1	99	80.355	Ochotona_princeps
ENSORLG00020003362	gfm1	97	81.129	ENSODEG00000004316	GFM1	96	81.129	Octodon_degus
ENSORLG00020003362	gfm1	100	90.241	ENSONIG00000003772	gfm1	100	90.241	Oreochromis_niloticus
ENSORLG00020003362	gfm1	97	81.868	ENSOCUG00000013561	GFM1	97	81.868	Oryctolagus_cuniculus
ENSORLG00020003362	gfm1	95	99.435	ENSORLG00000006487	gfm1	100	99.435	Oryzias_latipes
ENSORLG00020003362	gfm1	100	98.930	ENSORLG00015005829	gfm1	100	98.930	Oryzias_latipes_hsok
ENSORLG00020003362	gfm1	100	95.053	ENSOMEG00000012894	gfm1	100	95.053	Oryzias_melastigma
ENSORLG00020003362	gfm1	97	80.579	ENSOGAG00000008298	GFM1	96	80.579	Otolemur_garnettii
ENSORLG00020003362	gfm1	96	80.721	ENSOARG00000002409	GFM1	99	80.721	Ovis_aries
ENSORLG00020003362	gfm1	97	81.129	ENSPPAG00000033881	GFM1	97	81.129	Pan_paniscus
ENSORLG00020003362	gfm1	97	81.818	ENSPPRG00000009281	GFM1	96	81.818	Panthera_pardus
ENSORLG00020003362	gfm1	97	81.680	ENSPTIG00000012416	GFM1	96	81.680	Panthera_tigris_altaica
ENSORLG00020003362	gfm1	97	81.129	ENSPTRG00000015570	GFM1	97	81.129	Pan_troglodytes
ENSORLG00020003362	gfm1	97	80.992	ENSPANG00000016512	GFM1	97	80.992	Papio_anubis
ENSORLG00020003362	gfm1	100	82.888	ENSPKIG00000004876	gfm1	100	82.888	Paramormyrops_kingsleyae
ENSORLG00020003362	gfm1	99	80.295	ENSPSIG00000012567	GFM1	99	80.295	Pelodiscus_sinensis
ENSORLG00020003362	gfm1	97	87.310	ENSPMGG00000014068	gfm1	100	87.310	Periophthalmus_magnuspinnatus
ENSORLG00020003362	gfm1	97	81.103	ENSPEMG00000008942	Gfm1	97	81.103	Peromyscus_maniculatus_bairdii
ENSORLG00020003362	gfm1	86	78.125	ENSPCIG00000020195	GFM1	96	80.421	Phascolarctos_cinereus
ENSORLG00020003362	gfm1	100	91.444	ENSPFOG00000011022	gfm1	100	91.444	Poecilia_formosa
ENSORLG00020003362	gfm1	97	91.713	ENSPLAG00000019585	gfm1	100	90.871	Poecilia_latipinna
ENSORLG00020003362	gfm1	100	91.310	ENSPMEG00000012376	gfm1	100	91.310	Poecilia_mexicana
ENSORLG00020003362	gfm1	100	91.310	ENSPREG00000001332	gfm1	95	91.310	Poecilia_reticulata
ENSORLG00020003362	gfm1	97	80.992	ENSPPYG00000014244	GFM1	97	80.992	Pongo_abelii
ENSORLG00020003362	gfm1	94	78.947	ENSPCAG00000008934	GFM1	100	78.947	Procavia_capensis
ENSORLG00020003362	gfm1	98	80.900	ENSPCOG00000022259	GFM1	97	80.900	Propithecus_coquereli
ENSORLG00020003362	gfm1	97	80.441	ENSPVAG00000013605	GFM1	96	80.441	Pteropus_vampyrus
ENSORLG00020003362	gfm1	100	89.840	ENSPNYG00000006037	gfm1	100	89.840	Pundamilia_nyererei
ENSORLG00020003362	gfm1	100	84.759	ENSPNAG00000001237	gfm1	100	84.759	Pygocentrus_nattereri
ENSORLG00020003362	gfm1	97	80.414	ENSRNOG00000012873	Gfm1	97	80.414	Rattus_norvegicus
ENSORLG00020003362	gfm1	97	80.992	ENSRBIG00000031363	GFM1	97	80.992	Rhinopithecus_bieti
ENSORLG00020003362	gfm1	97	81.129	ENSRROG00000031081	GFM1	97	81.129	Rhinopithecus_roxellana
ENSORLG00020003362	gfm1	96	53.719	YLR069C	-	94	53.719	Saccharomyces_cerevisiae
ENSORLG00020003362	gfm1	97	80.716	ENSSBOG00000023252	GFM1	97	80.716	Saimiri_boliviensis_boliviensis
ENSORLG00020003362	gfm1	99	80.189	ENSSHAG00000017772	GFM1	98	80.654	Sarcophilus_harrisii
ENSORLG00020003362	gfm1	100	83.445	ENSSFOG00015003117	gfm1	100	83.445	Scleropages_formosus
ENSORLG00020003362	gfm1	100	88.102	ENSSMAG00000013221	gfm1	100	88.102	Scophthalmus_maximus
ENSORLG00020003362	gfm1	100	89.439	ENSSDUG00000018665	gfm1	100	89.439	Seriola_dumerili
ENSORLG00020003362	gfm1	100	89.305	ENSSLDG00000020606	gfm1	100	89.305	Seriola_lalandi_dorsalis
ENSORLG00020003362	gfm1	99	79.161	ENSSPUG00000018686	GFM1	100	79.161	Sphenodon_punctatus
ENSORLG00020003362	gfm1	100	90.508	ENSSPAG00000008800	gfm1	100	90.508	Stegastes_partitus
ENSORLG00020003362	gfm1	96	81.198	ENSSSCG00000025651	GFM1	95	81.198	Sus_scrofa
ENSORLG00020003362	gfm1	100	86.230	ENSTRUG00000009244	gfm1	100	86.230	Takifugu_rubripes
ENSORLG00020003362	gfm1	100	89.171	ENSTNIG00000007729	gfm1	100	89.171	Tetraodon_nigroviridis
ENSORLG00020003362	gfm1	90	73.333	ENSTBEG00000017404	GFM1	89	73.333	Tupaia_belangeri
ENSORLG00020003362	gfm1	96	81.198	ENSTTRG00000001735	GFM1	95	81.198	Tursiops_truncatus
ENSORLG00020003362	gfm1	98	81.037	ENSUAMG00000026381	GFM1	97	81.037	Ursus_americanus
ENSORLG00020003362	gfm1	98	81.037	ENSUMAG00000011268	GFM1	97	81.037	Ursus_maritimus
ENSORLG00020003362	gfm1	97	78.069	ENSVPAG00000009444	GFM1	96	78.069	Vicugna_pacos
ENSORLG00020003362	gfm1	96	81.983	ENSVVUG00000020091	GFM1	100	81.657	Vulpes_vulpes
ENSORLG00020003362	gfm1	96	83.705	ENSXETG00000032551	GFM1	95	83.705	Xenopus_tropicalis
ENSORLG00020003362	gfm1	54	87.811	ENSXCOG00000012590	gfm1	92	87.811	Xiphophorus_couchianus
ENSORLG00020003362	gfm1	100	91.176	ENSXMAG00000000261	gfm1	100	91.176	Xiphophorus_maculatus