EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020003394 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 12201 bases
Position: chr7:29516621-29528821
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020002634	MBD	PF01429.19	1e-12	1	1
ENSORLP00020022872	MBD	PF01429.19	1.1e-12	1	1
ENSORLP00020002627	MBD	PF01429.19	1.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020011002	-	3941	-	ENSORLP00020022872	1002 (aa)	-	-
ENSORLT00020010981	-	2979	-	ENSORLP00020002634	963 (aa)	-	-
ENSORLT00020010993	-	4097	-	ENSORLP00020002627	1054 (aa)	-	-

Gene Model

Click here to download ENSORLG00020003394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020003394's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020003394	-	100	52.174	ENSAOCG00000011591	-	100	50.717	Amphiprion_ocellaris
ENSORLG00020003394	-	100	50.643	ENSATEG00000019486	mecp2	100	51.896	Anabas_testudineus
ENSORLG00020003394	-	100	52.710	ENSACLG00000013679	-	100	52.226	Astatotilapia_calliptera
ENSORLG00020003394	-	94	56.660	ENSCSEG00000017325	-	100	45.320	Cynoglossus_semilaevis
ENSORLG00020003394	-	85	49.354	ENSCVAG00000001916	-	87	48.902	Cyprinodon_variegatus
ENSORLG00020003394	-	84	50.812	ENSFHEG00000017782	-	93	52.749	Fundulus_heteroclitus
ENSORLG00020003394	-	71	51.913	ENSGAFG00000020090	mecp2	100	53.460	Gambusia_affinis
ENSORLG00020003394	-	100	48.969	ENSHCOG00000015950	mecp2	100	44.240	Hippocampus_comes
ENSORLG00020003394	-	100	50.966	ENSKMAG00000014971	-	100	50.135	Kryptolebias_marmoratus
ENSORLG00020003394	-	100	47.650	ENSLBEG00000012591	-	100	50.046	Labrus_bergylta
ENSORLG00020003394	-	100	53.652	ENSMAMG00000011796	mecp2	100	53.961	Mastacembelus_armatus
ENSORLG00020003394	-	100	52.710	ENSMZEG00005026761	-	100	52.226	Maylandia_zebra
ENSORLG00020003394	-	100	97.720	ENSORLG00000028917	-	100	97.720	Oryzias_latipes
ENSORLG00020003394	-	100	98.235	ENSORLG00015017697	-	100	98.235	Oryzias_latipes_hsok
ENSORLG00020003394	-	100	86.270	ENSOMEG00000011209	-	100	86.270	Oryzias_melastigma
ENSORLG00020003394	-	57	68.733	ENSPFOG00000002307	mecp2	100	66.582	Poecilia_formosa
ENSORLG00020003394	-	100	48.783	ENSPLAG00000013943	mecp2	100	49.951	Poecilia_latipinna
ENSORLG00020003394	-	100	49.562	ENSPMEG00000006101	mecp2	100	50.485	Poecilia_mexicana
ENSORLG00020003394	-	100	49.037	ENSPREG00000012585	mecp2	100	50.097	Poecilia_reticulata
ENSORLG00020003394	-	100	52.710	ENSPNYG00000020387	-	100	52.226	Pundamilia_nyererei
ENSORLG00020003394	-	98	50.047	ENSSMAG00000012458	-	100	52.081	Scophthalmus_maximus
ENSORLG00020003394	-	100	52.897	ENSSDUG00000019809	mecp2	100	52.646	Seriola_dumerili
ENSORLG00020003394	-	100	52.617	ENSSLDG00000006333	mecp2	100	52.368	Seriola_lalandi_dorsalis
ENSORLG00020003394	-	100	50.392	ENSXMAG00000021429	-	100	52.558	Xiphophorus_maculatus